Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.9e-51 204.5 105 100.0
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.5e-21 105.5 53 98.1
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.7e-14 82.8 54 74.1
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.8e-14 81.6 54 72.2
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 5.0e-14 81.3 53 75.5
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 6.5e-14 80.9 53 71.7
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 8.5e-14 80.5 54 72.2
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.1e-13 80.1 53 75.5
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.9e-13 79.3 53 71.7
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 1.9e-13 79.3 53 73.6
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 2.5e-13 79.0 54 66.7
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 4.2e-13 78.2 53 71.7
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 5.5e-13 77.8 53 71.7
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 7.2e-13 77.4 53 67.9
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 9.5e-13 77.0 54 68.5
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 3.6e-12 75.1 53 64.2
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 3.6e-12 75.1 53 69.8
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 6.1e-12 74.3 53 67.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 8.0e-12 73.9 53 64.2
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 8.0e-12 73.9 53 64.2
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 8.0e-12 73.9 53 64.2
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.0e-11 73.6 89 50.6
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.4e-11 73.2 89 48.3
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.3e-11 72.4 54 61.1
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 2.3e-11 72.4 53 69.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 3.0e-11 72.0 55 61.8
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 4.0e-11 71.6 54 66.7
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 4.0e-11 71.6 54 59.3
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 4.0e-11 71.6 54 66.7
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 4.0e-11 71.6 89 47.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 5.2e-11 71.2 51 64.7
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 5.2e-11 71.2 89 49.4
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 5.2e-11 71.2 53 66.0
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 5.2e-11 71.2 54 59.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 6.8e-11 70.9 53 62.3
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 8.8e-11 70.5 89 50.6
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 8.8e-11 70.5 53 62.3
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.2e-10 70.1 53 64.2
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.2e-10 70.1 54 59.3
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.2e-10 70.1 53 67.9
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.5e-10 69.7 53 64.2
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.5e-10 69.7 89 42.7
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.0e-10 69.3 53 66.0
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.6e-10 68.9 54 59.3
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.6e-10 68.9 54 59.3
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.6e-10 68.9 89 49.4
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.6e-10 68.9 54 63.0
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.4e-10 68.6 54 57.4
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.4e-10 68.6 53 62.3
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 3.4e-10 68.6 51 62.7
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 4.4e-10 68.2 89 49.4
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 4.4e-10 68.2 53 54.7
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 5.7e-10 67.8 89 46.1
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.7e-10 67.8 53 58.5
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 7.5e-10 67.4 53 60.4
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 7.5e-10 67.4 54 59.3
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 7.5e-10 67.4 53 56.6
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 7.5e-10 67.4 53 60.4
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 9.8e-10 67.0 89 46.1
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 9.8e-10 67.0 89 46.1
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 9.8e-10 67.0 89 46.1
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 9.8e-10 67.0 89 44.9
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 9.8e-10 67.0 89 44.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.3e-09 66.6 89 46.1
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.3e-09 66.6 53 56.6
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.3e-09 66.6 51 60.8
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.3e-09 66.6 53 56.6
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.3e-09 66.6 53 54.7
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.7e-09 66.2 89 44.9
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.7e-09 66.2 89 40.4
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 2.2e-09 65.9 89 44.9
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.2e-09 65.9 89 44.9
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.8e-09 65.5 89 44.9
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.7e-09 65.1 51 58.8
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 4.9e-09 64.7 89 44.9
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 6.3e-09 64.3 90 42.2
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.1e-08 63.5 53 58.5
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.1e-08 63.5 89 43.8
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.1e-08 63.5 89 43.8
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.4e-08 62.4 53 52.8
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 3.1e-08 62.0 55 54.5
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 5.4e-08 61.2 89 42.7
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 9.2e-08 60.5 53 52.8
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 9.2e-08 60.5 53 52.8
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 9.2e-08 60.5 53 52.8
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.2e-07 60.1 53 56.6
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 1.6e-07 59.7 60 53.3
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 2.0e-07 59.3 89 41.6
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.5e-07 58.5 60 56.7
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.5e-07 58.5 46 63.0
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.5e-07 58.5 46 63.0


User provided reference genes

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