Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G03062 Aquilegia oxysepala HOM05D005425 ORTHO05D006686 1.1e-75 287.3 253 100.0
Dinv19577 Davidia involucrata HOM05D005425 ORTHO05D006686 1.7e-44 183.7 110 85.5
Lj4g0004112 Lotus japonicus HOM05D005425 ORTHO05D006686 1.1e-43 181.0 110 81.8
COL.COLO4_21175 Corchorus olitorius HOM05D005425 ORTHO05D006686 1.9e-43 180.3 110 81.8
GSVIVG01000275001 Vitis vinifera HOM05D005425 ORTHO05D006686 3.3e-43 179.5 107 86.0
Gorai.001G018900 Gossypium raimondii HOM05D005425 ORTHO05D006686 5.6e-43 178.7 110 80.9
PGR044G1074 Punica granatum HOM05D005425 ORTHO05D006686 5.6e-43 178.7 110 81.8
vmacro16402 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 9.5e-43 177.9 110 83.6
Gohir.A07G018500 Gossypium hirsutum HOM05D005425 ORTHO05D006686 1.2e-42 177.6 110 80.0
Nn6g31504 Nelumbo nucifera HOM05D005425 ORTHO05D006686 1.6e-42 177.2 111 80.2
Actinidia20626 Actinidia chinensis HOM05D005425 ORTHO05D006686 3.6e-42 176.0 107 85.0
Gohir.D07G018300 Gossypium hirsutum HOM05D005425 ORTHO05D006686 4.7e-42 175.6 110 80.0
arahy.Tifrunner.gnm1.ann1.A16VYK Arachis hypogaea HOM05D005425 ORTHO05D006686 1.0e-41 174.5 110 78.2
Duzib150G0231 Durio zibethinus HOM05D005425 ORTHO05D006686 1.4e-41 174.1 109 79.8
Lj4P729T25 Lonicera japonica HOM05D005425 ORTHO05D006686 1.4e-41 174.1 107 80.4
arahy.Tifrunner.gnm1.ann1.I1NZHN Arachis hypogaea HOM05D005425 ORTHO05D006686 2.3e-41 173.3 110 78.2
AUR62017596 Chenopodium quinoa HOM05D005425 ORTHO05D006686 2.3e-41 173.3 107 81.3
TWI34G0652 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 2.3e-41 173.3 110 81.8
TWI63G1799 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 2.3e-41 173.3 110 80.9
Cfa010679 Carpinus fangiana HOM05D005425 ORTHO05D006686 3.0e-41 172.9 111 81.1
Prupe.7G189100 Prunus persica HOM05D005425 ORTHO05D006686 3.0e-41 172.9 110 80.0
HanXRQChr02g0040411 Helianthus annuus HOM05D005425 ORTHO05D006686 4.0e-41 172.6 110 76.4
MD15G1225900 Malus domestica HOM05D005425 ORTHO05D006686 4.0e-41 172.6 110 79.1
ATR0006G051 Amborella trichopoda HOM05D005425 ORTHO05D006686 5.2e-41 172.2 110 78.2
Eucgr.C00752 Eucalyptus grandis HOM05D005425 ORTHO05D006686 6.8e-41 171.8 110 80.0
MD02G1106000 Malus domestica HOM05D005425 ORTHO05D006686 6.8e-41 171.8 110 79.1
AUR62015135 Chenopodium quinoa HOM05D005425 ORTHO05D006686 8.9e-41 171.4 107 79.4
Duzib168G1380 Durio zibethinus HOM05D005425 ORTHO05D006686 8.9e-41 171.4 110 79.1
EL10Ac9g22844 Beta vulgaris HOM05D005425 ORTHO05D006686 1.2e-40 171.0 108 77.8
Thecc.09G067100 Theobroma cacao HOM05D005425 ORTHO05D006686 1.2e-40 171.0 109 78.0
Ca_21353_v3 Cicer arietinum L. HOM05D005425 ORTHO05D006686 2.0e-40 170.2 110 77.3
TAR383G0806 Trochodendron aralioides HOM05D005425 ORTHO05D006686 2.0e-40 170.2 132 69.7
Atru.chr7.1809 Acer truncatum HOM05D005425 ORTHO05D006686 2.6e-40 169.9 110 78.2
Haze_26083 Corylus avellana HOM05D005425 ORTHO05D006686 2.6e-40 169.9 111 80.2
SEGI_31971 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 2.6e-40 169.9 112 75.0
VMungo1215G3244 Vigna mungo HOM05D005425 ORTHO05D006686 4.4e-40 169.1 110 77.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 5.8e-40 168.7 111 80.2
Lalb_Chr07g0181511 Lupinus albus HOM05D005425 ORTHO05D006686 5.8e-40 168.7 110 74.5
Rhsim12G0137300 Rhododendron simsii HOM05D005425 ORTHO05D006686 9.8e-40 167.9 114 78.1
HPP92_002368 Vanilla planifolia HOM05D005425 ORTHO05D006686 9.8e-40 167.9 109 77.1
HPP92_027595 Vanilla planifolia HOM05D005425 ORTHO05D006686 9.8e-40 167.9 109 77.1
CSS0042296 Camellia sinensis var. sinensis HOM05D005425 ORTHO05D006686 1.3e-39 167.5 103 83.5
Lalb_Chr12g0200431 Lupinus albus HOM05D005425 ORTHO05D006686 1.3e-39 167.5 109 75.2
Os04g0653100 Oryza sativa ssp. japonica HOM05D005425 ORTHO05D006686 1.3e-39 167.5 109 76.1
CANSAT56G0436 Cannabis sativa HOM05D005425 ORTHO05D006686 1.7e-39 167.2 104 79.8
CANSAT56G2296 Cannabis sativa HOM05D005425 ORTHO05D006686 1.7e-39 167.2 104 79.8
ECA247G3713 Erigeron canadensis HOM05D005425 ORTHO05D006686 1.7e-39 167.2 110 74.5
Glyma.17G043500 Glycine max HOM05D005425 ORTHO05D006686 1.7e-39 167.2 110 76.4
Sc19g0002240 Simmondsia chinensis HOM05D005425 ORTHO05D006686 1.7e-39 167.2 108 75.9
Potri.006G217400 Populus trichocarpa HOM05D005425 ORTHO05D006686 2.2e-39 166.8 110 74.5
Glyma.13G116300 Glycine max HOM05D005425 ORTHO05D006686 2.9e-39 166.4 110 76.4
DCAR_012869 Daucus carota HOM05D005425 ORTHO05D006686 3.7e-39 166.0 110 73.6
MBI13_g05972_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 3.7e-39 166.0 109 79.8
PSO675G8782 Papaver somniferum HOM05D005425 ORTHO05D006686 6.4e-39 165.2 106 79.2
RcHm_v2.0_Chr2g0096571 Rosa chinensis HOM05D005425 ORTHO05D006686 6.4e-39 165.2 110 77.3
Ciclev10009195m.g Citrus clementina HOM05D005425 ORTHO05D006686 8.3e-39 164.9 104 77.9
Medtr4g123593 Medicago truncatula HOM05D005425 ORTHO05D006686 8.3e-39 164.9 109 74.3
Zm00001eb068040 Zea mays HOM05D005425 ORTHO05D006686 8.3e-39 164.9 109 76.1
Cc01_g12410 Coffea canephora HOM05D005425 ORTHO05D006686 1.4e-38 164.1 110 74.5
FvH4_1g09870 Fragaria vesca HOM05D005425 ORTHO05D006686 1.4e-38 164.1 110 76.4
FAN19G0780 Fragaria x ananassa HOM05D005425 ORTHO05D006686 1.4e-38 164.1 110 76.4
Manes.03G055300 Manihot esculenta HOM05D005425 ORTHO05D006686 1.4e-38 164.1 110 73.6
Phvul.003G125400 Phaseolus vulgaris HOM05D005425 ORTHO05D006686 1.8e-38 163.7 108 75.9
CiPaw.03G198700 Carya illinoinensis HOM05D005425 ORTHO05D006686 2.4e-38 163.3 107 76.6
Hund24245 Selenicereus undatus HOM05D000001 ORTHO05D000003 2.4e-38 163.3 106 74.5
Psat4g020320 Pisum sativum HOM05D005425 ORTHO05D006686 3.2e-38 162.9 108 75.0
Lsat_1_v5_gn_1_2721 Lactuca sativa HOM05D005425 ORTHO05D006686 4.1e-38 162.5 110 74.5
HPP92_010993 Vanilla planifolia HOM05D005425 ORTHO05D006686 4.1e-38 162.5 109 76.1
MBI13_g09074_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 5.4e-38 162.2 113 76.1
TPR.G12630 Trifolium pratense HOM05D005425 ORTHO05D006686 5.4e-38 162.2 110 71.8
PSO717G0103 Papaver somniferum HOM05D005425 ORTHO05D006686 7.0e-38 161.8 108 75.9
Oeu023197.1 Olea europaea HOM05D005425 ORTHO05D006686 9.2e-38 161.4 108 76.9
Ah.01g013630 Amaranthus hybridus HOM05D005425 ORTHO05D006686 1.2e-37 161.0 108 72.2
Sabra06G0167600 Salix brachista HOM05D005425 ORTHO05D006686 2.7e-37 159.8 108 73.1
MSTRG.1593 Avicennia marina HOM05D005425 ORTHO05D006686 4.6e-37 159.1 110 72.7
THA.LOC104799598 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 6.6e-36 155.2 110 69.1
Migut.C01372 Erythranthe guttata HOM05D005425 ORTHO05D006686 8.6e-36 154.8 110 71.8
CsaV3_1G041480 Cucumis sativus L. HOM05D005425 ORTHO05D006686 1.1e-35 154.5 110 71.8
Nitab4.5_0000610g0160 Nicotiana tabacum HOM05D005425 ORTHO05D006686 1.1e-35 154.5 110 73.6
Sed0015214 Sechium edule HOM05D005425 ORTHO05D006686 1.1e-35 154.5 110 72.7
Solyc11g073240.2 Solanum lycopersicum HOM05D005425 ORTHO05D006686 2.5e-35 153.3 110 71.8
THA.LOC104810974 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 3.3e-35 152.9 110 67.3
Peaxi162Scf00406g00239 Petunia axillaris HOM05D005425 ORTHO05D006686 4.3e-35 152.5 110 72.7
CDE11G0474 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 9.5e-35 151.4 111 66.7
CAN.G764.11 Capsicum annuum HOM05D005425 ORTHO05D006686 1.2e-34 151.0 110 71.8
Sc13g0001610 Simmondsia chinensis HOM05D005425 ORTHO05D006686 1.6e-34 150.6 107 72.9
Sopen11g030870 Solanum pennellii HOM05D005425 ORTHO05D006686 1.6e-34 150.6 110 70.9
Manes.16G088201 Manihot esculenta HOM05D005425 ORTHO05D006686 2.8e-34 149.8 105 72.4
PGSC0003DMG401015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 2.8e-34 149.8 110 70.9
PGSC0003DMG402015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 2.8e-34 149.8 110 70.9
PGSC0003DMG400015542 Solanum tuberosum HOM05D005425 ORTHO05D006686 6.2e-34 148.7 107 72.9
unitig_578.g16119 Utricularia gibba HOM05D005425 ORTHO05D006686 1.1e-33 147.9 110 67.3
AUR62026084 Chenopodium quinoa HOM05D005425 ORTHO05D006686 2.3e-33 146.7 109 68.8
QL11p003539 Quercus lobata HOM05D005425 ORTHO05D006686 2.3e-33 146.7 159 52.8
Ah.04g151490 Amaranthus hybridus HOM05D005425 ORTHO05D006686 5.2e-33 145.6 109 67.0
AUR62024499 Chenopodium quinoa HOM05D005425 ORTHO05D006686 5.2e-33 145.6 109 68.8
EL10Ac3g07129 Beta vulgaris HOM05D005425 ORTHO05D006686 1.5e-32 144.1 109 67.9
Aa31LG4G13370 Aethionema arabicum HOM05D005425 ORTHO05D006686 3.4e-32 142.9 109 65.1
SMO347G0418 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 3.4e-32 142.9 108 66.7
Pp3c23_11420 Physcomitrium patens HOM05D005425 ORTHO05D006686 4.4e-32 142.5 110 64.5
Carub.0005s0927 Capsella rubella HOM05D005425 ORTHO05D006686 7.5e-32 141.7 107 64.5
CARHR098710 Cardamine hirsuta HOM05D005425 ORTHO05D006686 7.5e-32 141.7 110 64.5
AT3G43520 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 9.8e-32 141.4 107 63.6
BcaB02g10778 Brassica carinata HOM05D005425 ORTHO05D006686 1.3e-31 141.0 110 63.6
BcaC01g02214 Brassica carinata HOM05D005425 ORTHO05D006686 2.2e-31 140.2 109 63.3
A06p26640 Brassica napus HOM05D005425 ORTHO05D006686 2.2e-31 140.2 109 63.3
C03p67740 Brassica napus HOM05D005425 ORTHO05D006686 2.2e-31 140.2 109 63.3
BolSC21t60236H Brassica oleracea HOM05D005425 ORTHO05D006686 2.2e-31 140.2 109 63.3
BraA06t25598Z Brassica rapa HOM05D005425 ORTHO05D006686 2.2e-31 140.2 109 63.3
FAN23G2130 Fragaria x ananassa HOM05D005425 ORTHO05D006686 2.9e-31 139.8 95 74.7
FAN28G1834 Fragaria x ananassa HOM05D005425 ORTHO05D006686 2.9e-31 139.8 95 74.7
AL5G21490 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 6.4e-31 138.7 107 63.6
Sp5g17760 Schrenkiella parvula HOM05D005425 ORTHO05D006686 6.4e-31 138.7 107 64.5
SGA_v2.0_scaffold118G32605 Striga asiatica HOM05D005425 ORTHO05D006686 6.4e-31 138.7 107 66.4
CDE05G1879 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 8.3e-31 138.3 99 67.7
vmacro13523 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 4.1e-30 136.0 103 70.9
AagrBONN_evm.TU.Sc2ySwM_344.3815 Anthoceros agrestis HOM05D005425 ORTHO05D006686 7.0e-30 135.2 103 62.1
Pp3c23_5560 Physcomitrium patens HOM05D005425 ORTHO05D006686 7.0e-30 135.2 104 63.5
THA.LOC104804448 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 3.5e-29 132.9 108 63.9
AT2G26240 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 1.3e-28 131.0 107 64.5
SEGI_36327 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 1.3e-28 131.0 104 63.5
PGR142G0340 Punica granatum HOM05D005425 ORTHO05D006686 3.0e-28 129.8 114 62.3
Sp4g06390 Schrenkiella parvula HOM05D005425 ORTHO05D006686 5.0e-28 129.0 107 63.6
Mapoly0059s0086 Marchantia polymorpha HOM05D005425 ORTHO05D006686 6.6e-28 128.6 95 65.3
CARHR115050 Cardamine hirsuta HOM05D005425 ORTHO05D006686 8.6e-28 128.3 107 62.6
BcaC07g40833 Brassica carinata HOM05D005425 ORTHO05D006686 1.9e-27 127.1 107 62.6
A09p55370 Brassica napus HOM05D000181 ORTHO05D004115 1.9e-27 127.1 107 62.6
C08p38290 Brassica napus HOM05D000181 ORTHO05D004115 1.9e-27 127.1 107 62.6
BolC8t51404H Brassica oleracea HOM05D005425 ORTHO05D006686 1.9e-27 127.1 107 62.6
BraA09t40938Z Brassica rapa HOM05D005425 ORTHO05D006686 1.9e-27 127.1 107 62.6
BcaB08g35283 Brassica carinata HOM05D005425 ORTHO05D006686 2.5e-27 126.7 107 62.6
SMO351G0348 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 2.5e-27 126.7 105 57.1
AL4G18820 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 7.3e-27 125.2 107 61.7
Carub.0004s0606 Capsella rubella HOM05D005425 ORTHO05D006686 2.1e-26 123.6 106 62.3
Aa31LG5G9560 Aethionema arabicum HOM05D005425 ORTHO05D006686 1.4e-25 120.9 111 58.6
Thhalv10002166m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 3.3e-19 99.8 85 61.2
CBR_g16036 Chara braunii HOM05D005425 ORTHO05D006686 4.0e-17 92.8 103 46.6
Zm00001eb432380 Zea mays HOM05D005425 ORTHO05D006686 4.9e-15 85.9 84 57.1
Thhalv10002673m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 1.1e-14 84.7 62 69.4
FvH4_1g06370 Fragaria vesca HOM05D005425 ORTHO05D046282 8.1e-10 68.6 72 59.7
FAN19G2796 Fragaria x ananassa HOM05D005425 ORTHO05D046282 2.4e-09 67.0 72 58.3
C06p06010 Brassica napus HOM05D004888 ORTHO05D005792 2.6e-08 63.5 103 43.7
BolC6t35714H Brassica oleracea HOM05D004888 ORTHO05D005792 2.6e-08 63.5 103 43.7
Migut.M01776 Erythranthe guttata HOM05D004888 ORTHO05D005792 4.4e-08 62.8 101 40.6
BcaC08g43255 Brassica carinata HOM05D004888 ORTHO05D005792 7.6e-08 62.0 103 42.7
BraA06t23494Z Brassica rapa HOM05D004888 ORTHO05D005792 7.6e-08 62.0 103 40.8
SGA_v2.0_scaffold8G04307 Striga asiatica HOM05D004888 ORTHO05D005792 7.6e-08 62.0 101 40.6
Oeu020536.1 Olea europaea HOM05D005425 ORTHO05D006686 1.7e-07 60.8 54 61.1
BcaB07g33513 Brassica carinata HOM05D004888 ORTHO05D005792 2.2e-07 60.5 102 40.2
A06p02870 Brassica napus HOM05D004888 ORTHO05D005792 2.2e-07 60.5 102 40.2
CAN.G1781.4 Capsicum annuum HOM05D004888 ORTHO05D005792 2.9e-07 60.1 103 37.9
unitig_62.g23280 Utricularia gibba HOM05D004888 ORTHO05D005792 2.9e-07 60.1 99 41.4
Nitab4.5_0001393g0120 Nicotiana tabacum HOM05D004888 ORTHO05D005792 6.4e-07 58.9 101 38.6
PGSC0003DMG400014390 Solanum tuberosum HOM05D004888 ORTHO05D005792 6.4e-07 58.9 101 38.6
Peaxi162Scf00964g00141 Petunia axillaris HOM05D004888 ORTHO05D005792 8.4e-07 58.5 101 38.6
Solyc10g006310.3 Solanum lycopersicum HOM05D004888 ORTHO05D005792 1.4e-06 57.8 104 38.5
Thecc.07G042500 Theobroma cacao HOM05D004888 ORTHO05D005792 1.4e-06 57.8 101 38.6
Potri.011G138100 Populus trichocarpa HOM05D004888 ORTHO05D005792 1.9e-06 57.4 104 36.5
Sopen10g002260 Solanum pennellii HOM05D004888 ORTHO05D005792 1.9e-06 57.4 104 38.5
MSTRG.6911 Avicennia marina HOM05D004888 ORTHO05D005792 3.2e-06 56.6 102 40.2
Mapoly0043s0001 Marchantia polymorpha HOM05D004888 ORTHO05D005792 3.2e-06 56.6 102 40.2
THA.LOC104798774 Tarenaya hassleriana HOM05D004888 ORTHO05D005792 3.2e-06 56.6 101 38.6
Rhsim06G0216300 Rhododendron simsii HOM05D004888 ORTHO05D005792 4.2e-06 56.2 101 36.6
QL08p010712 Quercus lobata HOM05D004888 ORTHO05D005792 5.4e-06 55.8 101 37.6
QL08p011155 Quercus lobata HOM05D004888 ORTHO05D005792 5.4e-06 55.8 101 37.6
Aqoxy1G03261 Aquilegia oxysepala HOM05D004888 ORTHO05D005792 7.1e-06 55.5 102 38.2
Lsat_1_v5_gn_7_108760 Lactuca sativa HOM05D004888 ORTHO05D005792 7.1e-06 55.5 103 35.9
TWI38G0633 Tripterygium wilfordii HOM05D004888 ORTHO05D005792 7.1e-06 55.5 101 38.6
Cre08.g383300 Chlamydomonas reinhardtii HOM05D005425 ORTHO05D006686 9.3e-06 55.1 98 36.7
Thhalv10011871m.g Eutrema salsugineum HOM05D004888 ORTHO05D005792 9.3e-06 55.1 101 38.6
Gohir.A04G018500 Gossypium hirsutum HOM05D004888 ORTHO05D005792 9.3e-06 55.1 101 35.6
MBI18_g42744_MAGBIO Magnolia biondii HOM05D004888 ORTHO05D005792 9.3e-06 55.1 96 38.5
Nitab4.5_0001913g0080 Nicotiana tabacum HOM05D004888 ORTHO05D005792 9.3e-06 55.1 101 36.6


User provided reference genes

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