Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 0.0e+00 1312.7 742 100.0
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.1e-215 753.1 806 56.5
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.5e-213 746.9 806 56.0
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 4.1e-203 712.2 814 53.1
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.9e-201 706.1 737 56.2
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 6.5e-201 704.9 850 52.0
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 3.2e-200 702.6 829 51.3
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 4.2e-200 702.2 768 54.2
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 2.1e-199 699.9 808 51.0
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.0e-198 697.6 824 50.4
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 2.3e-198 696.4 813 51.2
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.0e-198 695.7 808 50.5
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 8.8e-198 694.5 810 52.2
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 1.2e-197 694.1 803 52.6
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.5e-197 693.7 744 57.5
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 9.8e-197 691.0 810 51.9
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 4.8e-196 688.7 806 52.4
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 6.3e-196 688.3 811 51.7
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 3.1e-195 686.0 824 49.8
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 3.1e-195 686.0 818 52.8
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 9.1e-195 684.5 830 51.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 9.1e-195 684.5 815 51.5
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.6e-194 683.7 798 53.9
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 2.3e-193 679.9 822 52.4
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.1e-192 677.6 827 49.3
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 3.6e-191 672.5 803 53.4
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 4.7e-191 672.2 807 50.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 4.7e-191 672.2 844 50.5
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 6.1e-191 671.8 824 50.7
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 6.1e-191 671.8 798 50.9
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 8.0e-191 671.4 828 50.4
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.3e-190 669.8 817 51.3
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 1.5e-189 667.2 793 51.2
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 3.7e-188 662.5 794 51.5
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 6.3e-188 661.8 825 48.0
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-187 661.0 787 51.3
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.1e-187 661.0 832 48.7
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.2e-186 657.5 821 49.9
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 3.5e-186 656.0 772 51.8
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.0e-185 654.4 797 51.6
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.9e-185 652.9 793 48.9
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 3.8e-185 652.5 800 50.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 6.6e-185 651.7 749 51.8
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 8.6e-185 651.4 790 51.1
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 8.6e-185 651.4 816 49.0
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.1e-184 651.0 785 50.2
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.9e-184 650.2 826 50.6
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 3.3e-184 649.4 800 48.5
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 3.6e-183 646.0 806 51.1
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.1e-183 645.2 794 50.9
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.1e-183 645.2 801 50.6
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 8.0e-183 644.8 797 51.3
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.8e-182 643.7 822 49.4
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.3e-182 643.3 757 51.1
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 6.8e-182 641.7 814 49.9
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.2e-181 641.0 813 49.9
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.5e-181 640.6 812 49.8
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 2.6e-181 639.8 803 49.1
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 3.4e-181 639.4 756 51.9
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 1.3e-180 637.5 810 48.1
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.7e-180 637.1 850 48.5
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 1.7e-180 637.1 753 51.7
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.4e-179 633.3 783 51.5
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 4.1e-179 632.5 827 48.0
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 9.2e-179 631.3 799 50.8
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.2e-178 630.9 775 51.5
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 2.0e-178 630.2 767 52.0
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 4.6e-178 629.0 814 49.3
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 3.0e-177 626.3 807 49.1
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 6.6e-177 625.2 810 48.4
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.6e-175 620.5 792 49.1
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.1e-174 617.8 811 48.6
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 1.4e-174 617.5 760 50.1
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 4.0e-174 615.9 795 48.9
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.2e-172 610.1 798 48.6
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.0e-169 601.3 789 49.0
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.3e-169 600.9 644 57.1
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 1.9e-168 597.0 819 47.4
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 4.3e-168 595.9 831 46.7
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 7.3e-168 595.1 744 50.3
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 2.1e-167 593.6 788 48.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.8e-166 588.6 813 46.1
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.5e-165 587.4 880 45.2
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 9.9e-165 584.7 743 51.3
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.7e-164 583.9 805 48.1
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.1e-159 567.0 766 45.6
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 4.9e-156 555.8 547 55.9
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.5e-152 544.3 722 48.3
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.6e-151 540.8 718 46.9
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 3.6e-151 539.7 718 46.7
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-150 538.1 718 46.2
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 9.9e-149 531.6 771 45.0
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.9e-147 527.3 795 43.0
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 3.5e-146 523.1 812 45.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.7e-145 520.8 807 43.7
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-139 501.5 806 42.2
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 5.4e-139 499.2 811 42.8
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.6e-138 497.7 440 60.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.3e-137 494.6 802 41.9
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.3e-137 493.8 796 42.8
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.3e-137 493.8 778 42.3
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-136 491.5 815 42.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 1.1e-136 491.5 815 42.5
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.3e-135 488.0 812 42.4
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 2.8e-135 486.9 545 49.7
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.1e-134 485.0 808 39.4
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.0e-134 483.0 810 40.4
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 3.9e-129 466.5 812 41.5
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.5e-128 463.8 806 40.4
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.1e-127 460.7 920 37.4
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 4.8e-127 459.5 587 49.1
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 1.1e-126 458.4 704 44.9
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.8e-124 449.9 786 40.7
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 3.5e-122 443.4 695 40.9
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.3e-119 434.9 636 46.2
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 8.5e-116 422.2 470 52.6
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 3.1e-110 403.7 712 40.4
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 5.3e-110 402.9 526 51.5
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 3.0e-105 387.1 501 43.5
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 8.0e-98 362.5 851 35.8
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 3.3e-96 357.1 518 45.2
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.3e-95 355.1 318 59.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.8e-92 343.6 517 45.5
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 7.2e-91 339.3 477 49.5
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 3.4e-88 330.5 348 52.3
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.1e-83 315.5 805 33.8
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.9e-83 314.7 716 33.0
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 4.4e-80 303.5 502 36.9
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 5.9e-77 293.1 544 36.9
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 3.8e-76 290.4 413 49.6
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.4e-73 282.0 540 36.7
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.0e-72 278.1 532 38.2
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 2.1e-66 258.1 440 40.2
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 1.0e-65 255.8 459 37.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.2e-64 252.3 276 51.1
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 9.9e-48 196.1 210 51.4
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.1e-42 178.3 712 26.5
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 2.1e-34 151.8 355 36.9
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 3.8e-31 141.0 400 33.2
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-27 129.4 336 35.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.9e-22 112.1 187 49.7
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.4e-19 100.1 147 42.9
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.8e-18 98.2 182 38.5
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 7.6e-16 90.1 102 52.9
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.6e-16 90.1 241 39.4
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.9e-14 85.5 82 54.9
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-14 84.3 146 38.4
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.0e-13 80.5 307 30.9
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 8.7e-12 76.6 71 63.4
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 8.7e-12 76.6 136 41.2
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-11 75.9 273 31.1
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.9e-11 75.5 81 58.0
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-10 72.4 281 31.0
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 3.7e-10 71.2 134 34.3
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 9.0e-09 66.6 131 30.5
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 9.0e-09 66.6 90 52.2
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-07 63.2 89 49.4
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 5.0e-07 60.8 61 50.8
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 6.5e-07 60.5 53 54.7
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.4e-06 59.3 66 45.5
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 2.5e-06 58.5 51 62.7
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 4.2e-06 57.8 88 39.8


User provided reference genes

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