Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.3e-73 279.6 141 100.0
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 9.1e-19 97.4 127 48.0
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.0e-18 96.3 133 48.1
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.3e-17 93.6 111 55.9
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.3e-17 93.6 113 49.6
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.7e-17 93.2 142 48.6
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.8e-17 92.0 122 51.6
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.1e-16 90.5 135 45.9
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 5.5e-16 88.2 130 48.5
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 9.4e-16 87.4 125 44.8
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.2e-15 87.0 132 41.7
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 2.1e-15 86.3 128 46.9
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 3.6e-15 85.5 116 46.6
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 3.6e-15 85.5 145 40.7
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 6.1e-15 84.7 127 48.0
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 6.1e-15 84.7 127 48.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.9e-15 84.3 113 48.7
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 7.9e-15 84.3 109 50.5
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.0e-14 84.0 121 46.3
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.8e-14 83.2 123 47.2
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.8e-14 83.2 141 46.1
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.9e-14 82.0 105 46.7
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 8.8e-14 80.9 130 40.8
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 8.8e-14 80.9 129 44.2
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.5e-13 80.1 128 43.8
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 1.5e-13 80.1 129 41.1
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.5e-13 80.1 126 45.2
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-13 79.3 122 49.2
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 3.3e-13 79.0 118 42.4
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 5.7e-13 78.2 138 41.3
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 9.7e-13 77.4 139 40.3
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 9.7e-13 77.4 130 40.0
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.3e-12 77.0 143 37.8
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.3e-12 77.0 148 36.5
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.3e-12 77.0 128 42.2
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 2.8e-12 75.9 130 39.2
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 2.8e-12 75.9 125 47.2
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 2.8e-12 75.9 142 42.3
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 3.7e-12 75.5 126 46.0
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 3.7e-12 75.5 126 39.7
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 3.7e-12 75.5 138 41.3
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 4.8e-12 75.1 122 45.1
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.8e-12 75.1 122 45.1
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.8e-12 75.1 122 44.3
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.8e-12 75.1 123 48.0
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 8.2e-12 74.3 154 42.2
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.2e-12 74.3 132 40.2
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.8e-11 73.2 136 37.5
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 2.4e-11 72.8 127 44.9
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 3.1e-11 72.4 120 42.5
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.1e-11 72.0 139 38.1
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 5.3e-11 71.6 124 43.5
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 5.3e-11 71.6 126 40.5
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 7.0e-11 71.2 122 45.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 9.1e-11 70.9 122 45.9
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 1.6e-10 70.1 122 41.8
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 2.0e-10 69.7 116 44.0
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 2.0e-10 69.7 129 35.7
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.5e-10 68.6 115 43.5
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.5e-10 68.6 115 44.3
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 4.5e-10 68.6 124 42.7
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.7e-10 67.8 80 46.2
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.7e-09 66.6 152 35.5
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 6.5e-09 64.7 141 38.3
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 6.5e-09 64.7 107 38.3
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.5e-08 63.5 126 39.7
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.9e-08 63.2 133 36.8
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.2e-08 62.0 117 38.5
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.2e-08 62.0 117 38.5
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 4.2e-08 62.0 119 37.0
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 4.2e-08 62.0 109 39.4
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 5.5e-08 61.6 114 37.7
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 1.6e-07 60.1 114 39.5
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 2.1e-07 59.7 100 44.0
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 2.7e-07 59.3 108 41.7
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 3.6e-07 58.9 109 37.6
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 4.7e-07 58.5 152 32.9
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 6.1e-07 58.2 138 37.0
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 6.1e-07 58.2 127 37.0
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 6.1e-07 58.2 108 41.7
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 3.0e-06 55.8 134 35.8
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 8.8e-06 54.3 111 41.4


User provided reference genes

Program Settings