Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 2.9e-123 445.3 234 100.0
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 9.1e-48 194.5 237 46.8
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 9.4e-45 184.5 237 45.6
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 4.6e-44 182.2 222 46.8
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 1.0e-38 164.5 236 43.2
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.0e-38 164.5 232 44.0
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.7e-38 163.7 237 42.2
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 2.5e-37 159.8 236 42.8
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 2.5e-37 159.8 257 41.2
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 3.2e-37 159.5 172 46.5
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 9.4e-37 157.9 236 42.8
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.2e-36 157.5 232 40.9
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 1.6e-36 157.1 228 42.5
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 2.1e-36 156.8 228 43.4
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 2.7e-36 156.4 228 42.5
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 4.7e-36 155.6 222 43.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.0e-35 154.5 235 40.9
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-35 154.1 228 43.4
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 2.3e-35 153.3 235 41.7
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 2.3e-35 153.3 238 42.4
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.3e-35 153.3 238 42.4
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 2.3e-35 153.3 233 39.5
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 3.0e-35 152.9 236 41.9
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.0e-35 152.9 238 41.6
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.0e-35 152.9 233 40.3
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 8.8e-35 151.4 237 40.5
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 8.8e-35 151.4 238 41.6
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.5e-34 150.6 228 42.5
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.5e-34 150.6 234 41.9
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.0e-34 150.2 232 39.7
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.0e-34 150.2 205 44.4
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 5.7e-34 148.7 243 41.2
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 7.4e-34 148.3 229 41.0
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.3e-33 147.5 206 40.8
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 3.7e-33 146.0 228 43.9
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 4.8e-33 145.6 236 41.1
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 8.2e-33 144.8 237 40.1
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.8e-32 143.7 229 41.0
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.3e-32 142.1 228 40.4
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 5.3e-32 142.1 246 38.6
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 7.0e-32 141.7 235 40.0
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 9.1e-32 141.4 230 39.1
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 9.1e-32 141.4 228 40.4
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 9.1e-32 141.4 228 40.4
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 3.5e-31 139.4 201 42.8
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.3e-30 137.5 232 39.7
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 2.2e-30 136.7 230 37.8
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 5.0e-30 135.6 229 39.3
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.0e-30 135.6 232 39.2
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 6.5e-30 135.2 240 39.2
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 1.9e-29 133.7 235 35.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 5.5e-29 132.1 187 43.9
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 7.2e-29 131.7 228 39.9
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 9.4e-29 131.3 167 43.1
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 9.4e-29 131.3 171 45.6
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.2e-28 131.0 243 37.0
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 4.7e-28 129.0 181 43.1
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 8.0e-28 128.3 210 39.5
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 4.0e-27 125.9 226 38.9
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 6.7e-27 125.2 234 36.3
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 3.7e-25 119.4 200 38.0
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 4.5e-23 112.5 136 42.6
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.3e-22 110.9 136 44.9
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 2.9e-22 109.8 206 35.0
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 3.2e-21 106.3 138 41.3
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 7.2e-21 105.1 219 32.4
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.4e-21 104.8 130 40.8
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 3.0e-19 99.8 213 37.1
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.4e-16 90.9 117 41.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.4e-16 90.1 141 39.0
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 2.0e-15 87.0 138 36.2
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 3.5e-15 86.3 121 38.0
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.3e-14 83.6 120 36.7
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 3.8e-14 82.8 130 42.3
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.9e-13 80.5 120 37.5
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 9.5e-13 78.2 122 37.7
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.8e-12 76.6 122 37.7
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.5e-10 68.6 53 66.0


User provided reference genes

Program Settings