Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02845 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 2.0e-71 272.3 135 100.0
MBI16_g19654_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D004550 3.5e-52 208.4 127 77.2
Dinv15769 Davidia involucrata HOM05D003735 ORTHO05D004550 6.6e-51 204.1 127 77.2
Cfa004592 Carpinus fangiana HOM05D003735 ORTHO05D004550 2.5e-50 202.2 127 78.0
Manes.07G071000 Manihot esculenta HOM05D003735 ORTHO05D004550 2.5e-50 202.2 125 76.8
PGR142G3714 Punica granatum HOM05D003735 ORTHO05D004550 9.5e-50 200.3 127 76.4
Haze_10190 Corylus avellana HOM05D003735 ORTHO05D004550 2.1e-49 199.1 127 77.2
Phvul.007G040800 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 2.1e-49 199.1 126 76.2
Dinv42198 Davidia involucrata HOM05D003735 ORTHO05D004550 6.2e-49 197.6 131 72.5
Nn5g30431 Nelumbo nucifera HOM05D003735 ORTHO05D004550 6.2e-49 197.6 127 74.0
Manes.07G071116 Manihot esculenta HOM05D003735 ORTHO05D004550 1.4e-48 196.4 124 75.8
Phvul.007G040700 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 1.4e-48 196.4 126 75.4
HPP92_011617 Vanilla planifolia HOM05D003735 ORTHO05D004550 1.4e-48 196.4 124 75.0
ClCG05G010320 Citrullus lanatus HOM05D003735 ORTHO05D004550 1.8e-48 196.1 127 74.8
Glyma.20G129700 Glycine max HOM05D003735 ORTHO05D004550 1.8e-48 196.1 126 74.6
arahy.Tifrunner.gnm1.ann1.28YLK9 Arachis hypogaea HOM05D003735 ORTHO05D004550 2.3e-48 195.7 126 73.8
arahy.Tifrunner.gnm1.ann1.678ZZJ Arachis hypogaea HOM05D003735 ORTHO05D004550 3.1e-48 195.3 126 73.8
arahy.Tifrunner.gnm1.ann1.HR3ZI9 Arachis hypogaea HOM05D003735 ORTHO05D004550 3.1e-48 195.3 126 73.8
TWI75G1082 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 3.1e-48 195.3 126 76.2
VMungo0720G1863 Vigna mungo HOM05D003735 ORTHO05D004550 4.0e-48 194.9 126 73.8
Hma1.2p1_0796F.1_g219280 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 6.8e-48 194.1 127 74.0
SalBow3G2544 Salvia bowleyana HOM05D003735 ORTHO05D004550 6.8e-48 194.1 127 72.4
Thecc.02G109600 Theobroma cacao HOM05D003735 ORTHO05D004550 6.8e-48 194.1 125 74.4
TPR.G3238 Trifolium pratense HOM05D003735 ORTHO05D004550 1.2e-47 193.4 124 72.6
Hund06312 Selenicereus undatus HOM05D003735 ORTHO05D004550 2.6e-47 192.2 127 72.4
arahy.Tifrunner.gnm1.ann1.SBY3PD Arachis hypogaea HOM05D003735 ORTHO05D004550 3.4e-47 191.8 126 72.2
Cpa.g.sc106.101 Carica papaya HOM05D003735 ORTHO05D004550 3.4e-47 191.8 127 70.9
Migut.N01162 Erythranthe guttata HOM05D003735 ORTHO05D004550 4.4e-47 191.4 125 71.2
TPR.G3239 Trifolium pratense HOM05D003735 ORTHO05D004550 4.4e-47 191.4 124 72.6
Glyma.10G261300 Glycine max HOM05D003735 ORTHO05D004550 5.8e-47 191.0 126 72.2
Prupe.7G233900 Prunus persica HOM05D003735 ORTHO05D004550 5.8e-47 191.0 126 73.8
Sed0001414 Sechium edule HOM05D003735 ORTHO05D004550 5.8e-47 191.0 127 71.7
Manes.07G071100 Manihot esculenta HOM05D003735 ORTHO05D004550 7.5e-47 190.7 124 73.4
QL11p033356 Quercus lobata HOM05D003735 ORTHO05D004550 7.5e-47 190.7 127 73.2
Ciclev10028518m.g Citrus clementina HOM05D003735 ORTHO05D004550 9.8e-47 190.3 125 74.4
Haze_10183 Corylus avellana HOM05D003735 ORTHO05D004550 9.8e-47 190.3 127 73.2
Lj5g0001181 Lotus japonicus HOM05D003735 ORTHO05D004550 9.8e-47 190.3 126 73.0
PSO541G1406 Papaver somniferum HOM05D003735 ORTHO05D004550 9.8e-47 190.3 127 75.6
Sabra09G0072900 Salix brachista HOM05D003735 ORTHO05D004550 9.8e-47 190.3 127 72.4
Sabra09G0073100 Salix brachista HOM05D003735 ORTHO05D004550 9.8e-47 190.3 127 72.4
GSVIVG01037915001 Vitis vinifera HOM05D003735 ORTHO05D004550 1.3e-46 189.9 126 72.2
CSS0002879 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 1.7e-46 189.5 127 70.9
CSS0013486 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 1.7e-46 189.5 127 70.9
Psat6g217400 Pisum sativum HOM05D003735 ORTHO05D004550 1.7e-46 189.5 127 70.9
Ca_11068_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 2.9e-46 188.7 124 71.8
Eucgr.I01098 Eucalyptus grandis HOM05D003735 ORTHO05D004550 2.9e-46 188.7 124 73.4
Eucgr.I01100 Eucalyptus grandis HOM05D003735 ORTHO05D004550 2.9e-46 188.7 126 71.4
THA.LOC104825376 Tarenaya hassleriana HOM05D003735 ORTHO05D004550 2.9e-46 188.7 127 70.1
Lalb_Chr09g0319561 Lupinus albus HOM05D003735 ORTHO05D004550 3.7e-46 188.3 126 72.2
SGA_v2.0_scaffold393G50713 Striga asiatica HOM05D003735 ORTHO05D004550 3.7e-46 188.3 124 71.8
Lj9C323T5 Lonicera japonica HOM05D003735 ORTHO05D004550 4.9e-46 188.0 127 72.4
Oeu013756.1 Olea europaea HOM05D003735 ORTHO05D004550 4.9e-46 188.0 122 72.1
Potri.009G094800 Populus trichocarpa HOM05D003735 ORTHO05D004550 4.9e-46 188.0 127 70.9
C06p04320 Brassica napus HOM05D003735 ORTHO05D004550 6.4e-46 187.6 124 70.2
BolC6t35561H Brassica oleracea HOM05D003735 ORTHO05D004550 6.4e-46 187.6 124 70.2
COL.COLO4_32583 Corchorus olitorius HOM05D003735 ORTHO05D004550 6.4e-46 187.6 127 70.9
CiPaw.05G012300 Carya illinoinensis HOM05D003735 ORTHO05D004550 8.3e-46 187.2 127 71.7
GSVIVG01037913001 Vitis vinifera HOM05D003735 ORTHO05D004550 8.3e-46 187.2 126 71.4
Ca_11064_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 1.1e-45 186.8 126 71.4
Cc02_g19320 Coffea canephora HOM05D003735 ORTHO05D004550 1.1e-45 186.8 127 70.1
Duzib248G1182 Durio zibethinus HOM05D003735 ORTHO05D004550 1.4e-45 186.4 125 72.0
BcaC08g43148 Brassica carinata HOM05D003735 ORTHO05D004550 1.9e-45 186.0 124 69.4
CARHR039880 Cardamine hirsuta HOM05D003735 ORTHO05D004550 1.9e-45 186.0 124 70.2
Gohir.A12G021500 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.9e-45 186.0 127 69.3
Lalb_Chr02g0145261 Lupinus albus HOM05D003735 ORTHO05D004550 1.9e-45 186.0 126 69.0
PSO675G8377 Papaver somniferum HOM05D003735 ORTHO05D004550 1.9e-45 186.0 127 72.4
Psat6g217600 Pisum sativum HOM05D003735 ORTHO05D004550 1.9e-45 186.0 124 70.2
CSS0020963 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 2.4e-45 185.7 127 69.3
Oeu029527.5 Olea europaea HOM05D003735 ORTHO05D004550 2.4e-45 185.7 125 70.4
Thecc.02G109200 Theobroma cacao HOM05D003735 ORTHO05D004550 2.4e-45 185.7 122 73.0
vmacro01998 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 2.4e-45 185.7 128 69.5
Potri.001G299700 Populus trichocarpa HOM05D003735 ORTHO05D004550 3.2e-45 185.3 125 69.6
Actinidia00406 Actinidia chinensis HOM05D003735 ORTHO05D004550 4.1e-45 184.9 127 68.5
CiPaw.05G012200 Carya illinoinensis HOM05D003735 ORTHO05D004550 4.1e-45 184.9 127 70.9
AT1G49820 Arabidopsis thaliana HOM05D003735 ORTHO05D004550 5.4e-45 184.5 124 69.4
MSTRG.27746 Avicennia marina HOM05D003735 ORTHO05D004550 5.4e-45 184.5 122 70.5
MSTRG.5338 Avicennia marina HOM05D003735 ORTHO05D004550 5.4e-45 184.5 122 72.1
Gorai.008G022500 Gossypium raimondii HOM05D003735 ORTHO05D004550 5.4e-45 184.5 127 68.5
Medtr1g107235 Medicago truncatula HOM05D003735 ORTHO05D004550 5.4e-45 184.5 126 69.0
Glyma.01G244132 Glycine max HOM05D003735 ORTHO05D004550 7.1e-45 184.1 126 69.8
Os04g0669800 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 7.1e-45 184.1 125 68.0
A06p03780 Brassica napus HOM05D003735 ORTHO05D004550 9.2e-45 183.7 124 68.5
BraA06t23583Z Brassica rapa HOM05D003735 ORTHO05D004550 9.2e-45 183.7 124 68.5
Os04g0669900 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 9.2e-45 183.7 125 68.0
vmacro01999 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 9.2e-45 183.7 128 69.5
AUR62025585 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.2e-44 183.3 127 66.9
CsaV3_3G018170 Cucumis sativus L. HOM05D003735 ORTHO05D004550 1.2e-44 183.3 127 68.5
Rhsim11G0159400 Rhododendron simsii HOM05D003735 ORTHO05D004550 1.2e-44 183.3 127 70.1
TWI79G0069 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 1.2e-44 183.3 125 71.2
CANSAT25G2742 Cannabis sativa HOM05D003735 ORTHO05D004550 1.6e-44 183.0 127 68.5
Atru.chr5.2510 Acer truncatum HOM05D003735 ORTHO05D004550 2.1e-44 182.6 125 72.0
MD10G1147300 Malus domestica HOM05D003735 ORTHO05D004550 2.1e-44 182.6 124 73.4
QL11p033367 Quercus lobata HOM05D003735 ORTHO05D004550 2.1e-44 182.6 126 70.6
Sp1g36700 Schrenkiella parvula HOM05D003735 ORTHO05D004550 2.1e-44 182.6 124 68.5
TPR.G19078 Trifolium pratense HOM05D003735 ORTHO05D004550 2.1e-44 182.6 130 69.2
unitig_747.g21222 Utricularia gibba HOM05D003735 ORTHO05D004550 2.1e-44 182.6 125 68.8
MELO3C019550.2 Cucumis melo HOM05D003735 ORTHO05D004550 2.7e-44 182.2 127 68.5
Lj9A323T50 Lonicera japonica HOM05D003735 ORTHO05D004550 2.7e-44 182.2 127 70.1
Ah.01g018310 Amaranthus hybridus HOM05D003735 ORTHO05D004550 6.0e-44 181.0 127 65.4
AUR62001369 Chenopodium quinoa HOM05D003735 ORTHO05D004550 6.0e-44 181.0 127 66.1
Gohir.D12G022100 Gossypium hirsutum HOM05D003735 ORTHO05D004550 6.0e-44 181.0 127 66.9
Carub.0001s3903 Capsella rubella HOM05D003735 ORTHO05D004550 1.0e-43 180.3 124 68.5
Gohir.D12G022000 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.0e-43 180.3 127 67.7
BcaB07g33662 Brassica carinata HOM05D003735 ORTHO05D004550 1.3e-43 179.9 124 67.7
Rhsim11G0159300 Rhododendron simsii HOM05D003735 ORTHO05D004550 1.7e-43 179.5 127 68.5
Thhalv10011522m.g Eutrema salsugineum HOM05D003735 ORTHO05D004550 2.3e-43 179.1 124 66.9
Gorai.008G022400 Gossypium raimondii HOM05D003735 ORTHO05D004550 3.0e-43 178.7 124 67.7
Prupe.8G136000 Prunus persica HOM05D003735 ORTHO05D004550 3.0e-43 178.7 127 70.9
VMungo1215G1247 Vigna mungo HOM05D003735 ORTHO05D004550 3.0e-43 178.7 126 65.9
Aa31LG10G4250 Aethionema arabicum HOM05D003735 ORTHO05D004550 3.9e-43 178.3 124 69.4
HanXRQChr10g0296961 Helianthus annuus HOM05D003735 ORTHO05D004550 3.9e-43 178.3 121 70.2
Peaxi162Scf00016g02426 Petunia axillaris HOM05D003735 ORTHO05D004550 3.9e-43 178.3 126 67.5
Nitab4.5_0011634g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 6.6e-43 177.6 127 66.9
RcHm_v2.0_Chr2g0122061 Rosa chinensis HOM05D003735 ORTHO05D004550 6.6e-43 177.6 127 68.5
EL10Ac9g22264 Beta vulgaris HOM05D003735 ORTHO05D004550 8.6e-43 177.2 127 65.4
RcHm_v2.0_Chr6g0254911 Rosa chinensis HOM05D003735 ORTHO05D004550 8.6e-43 177.2 127 68.5
AUR62010319 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.1e-42 176.8 128 63.3
Lsat_1_v5_gn_5_115400 Lactuca sativa HOM05D003735 ORTHO05D004550 1.1e-42 176.8 121 70.2
MD10G1098700 Malus domestica HOM05D003735 ORTHO05D004550 1.1e-42 176.8 124 71.0
FAN24G3115 Fragaria x ananassa HOM05D003735 ORTHO05D004550 1.5e-42 176.4 127 68.5
FAN27G1495 Fragaria x ananassa HOM05D003735 ORTHO05D004550 1.5e-42 176.4 127 69.3
MD10G1098200 Malus domestica HOM05D003735 ORTHO05D004550 1.5e-42 176.4 126 69.0
DCAR_021982 Daucus carota HOM05D003735 ORTHO05D004550 1.9e-42 176.0 126 66.7
FvH4_2g05040 Fragaria vesca HOM05D003735 ORTHO05D004550 1.9e-42 176.0 127 69.3
Sopen01g049750 Solanum pennellii HOM05D003735 ORTHO05D004550 2.5e-42 175.6 127 65.4
PGSC0003DMG400025861 Solanum tuberosum HOM05D003735 ORTHO05D004550 2.5e-42 175.6 127 66.1
Duzib132G0856 Durio zibethinus HOM05D003735 ORTHO05D004550 4.3e-42 174.9 147 60.5
Solyc01g107550.3 Solanum lycopersicum HOM05D003735 ORTHO05D004550 4.3e-42 174.9 127 65.4
Cc01_g17410 Coffea canephora HOM05D003735 ORTHO05D004550 5.6e-42 174.5 124 67.7
CAN.G606.4 Capsicum annuum HOM05D003735 ORTHO05D004550 1.2e-41 173.3 127 65.4
ECA234G0132 Erigeron canadensis HOM05D003735 ORTHO05D004550 1.2e-41 173.3 123 67.5
Zm00001eb433310 Zea mays HOM05D003735 ORTHO05D004550 1.2e-41 173.3 121 67.8
Cc02_g18410 Coffea canephora HOM05D003735 ORTHO05D004550 1.6e-41 172.9 124 66.9
FAN20G1457 Fragaria x ananassa HOM05D003735 ORTHO05D004550 2.1e-41 172.6 127 66.9
AL1G57300 Arabidopsis lyrata HOM05D003735 ORTHO05D004550 2.8e-41 172.2 123 67.5
FAN15G3608 Fragaria x ananassa HOM05D003735 ORTHO05D004550 3.1e-40 168.7 127 66.9
AUR62039068 Chenopodium quinoa HOM05D003735 ORTHO05D004550 6.8e-40 167.5 127 62.2
CDE02G0578 Ceratophyllum demersum HOM05D003735 ORTHO05D004550 4.4e-39 164.9 127 62.2
ECA232G2787 Erigeron canadensis HOM05D003735 ORTHO05D004550 2.2e-38 162.5 123 63.4
DCAR_001652 Daucus carota HOM05D003735 ORTHO05D004550 3.8e-38 161.8 124 61.3
ATR0589G073 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.1e-37 160.2 124 62.9
ATR0589G028 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.4e-37 159.8 124 61.3
QL11p033306 Quercus lobata HOM05D003735 ORTHO05D004550 8.6e-35 150.6 115 66.1
AagrBONN_evm.TU.Sc2ySwM_344.2850 Anthoceros agrestis HOM05D003735 ORTHO05D004550 3.4e-31 138.7 123 55.3
Mapoly0029s0020 Marchantia polymorpha HOM05D003735 ORTHO05D004550 3.4e-31 138.7 125 51.2
SMO340G0152 Selaginella moellendorffii HOM05D003735 ORTHO05D004550 4.4e-31 138.3 126 54.0
Pp3c6_19060 Physcomitrium patens HOM05D003735 ORTHO05D004550 6.4e-30 134.4 123 52.8
TPR.G20408 Trifolium pratense HOM05D003735 ORTHO05D004550 2.1e-28 129.4 88 71.6
Gorai.013G047400 Gossypium raimondii HOM05D003735 ORTHO05D004550 1.9e-26 122.9 128 53.1
Gohir.D13G042333 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.6e-25 119.8 127 52.0
Gohir.A13G043900 Gossypium hirsutum HOM05D003735 ORTHO05D004550 2.8e-25 119.0 127 52.0
BcaC08g43149 Brassica carinata HOM05D003735 ORTHO05D004550 4.8e-25 118.2 77 76.6
arahy.Tifrunner.gnm1.ann1.TAI6X1 Arachis hypogaea HOM05D003735 ORTHO05D004550 1.4e-24 116.7 73 69.9
Hma1.2p1_1023F.1_g249070 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 1.4e-24 116.7 72 68.1
arahy.Tifrunner.gnm1.ann1.Z6IW8Q Arachis hypogaea HOM05D003735 ORTHO05D004550 1.8e-24 116.3 73 71.2
CBR_g23696 Chara braunii HOM05D003735 ORTHO05D004550 4.0e-24 115.2 129 45.0
Ciclev10029480m.g Citrus clementina HOM05D003735 ORTHO05D004550 2.6e-23 112.5 110 54.5
Nitab4.5_0026736g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 9.9e-23 110.5 73 65.8
Nitab4.5_0001143g0070 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.3e-22 110.2 73 65.8
Nitab4.5_0001143g0030 Nicotiana tabacum HOM05D003735 ORTHO05D004550 2.7e-20 102.4 73 61.6
CBR_g12222 Chara braunii HOM05D003735 ORTHO05D004550 7.9e-20 100.9 157 37.6
RcHm_v2.0_Chr6g0254921 Rosa chinensis HOM05D003735 ORTHO05D004550 3.0e-19 99.0 73 61.6
Cre16.g673550 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D007494 2.1e-17 92.8 126 40.5
TPR.G31649 Trifolium pratense HOM05D000067 ORTHO05D000097 4.0e-16 88.6 87 49.4
TPR.G13570 Trifolium pratense HOM05D003735 ORTHO05D004354 1.2e-15 87.0 94 46.8
MCO11G261 Micromonas commoda HOM05D003735 ORTHO05D007494 1.5e-15 86.7 130 36.2
PRCOL_00000373 Prasinoderma coloniale HOM05D003735 ORTHO05D006943 3.8e-14 82.0 112 39.3


User provided reference genes

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