Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 2.4e-69 265.4 133 100.0
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.3e-62 243.0 133 88.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 3.7e-62 241.5 133 88.0
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 4.1e-61 238.0 133 86.5
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 4.1e-61 238.0 133 87.2
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 6.9e-61 237.3 133 86.5
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 6.9e-61 237.3 133 87.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 9.0e-61 236.9 133 86.5
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 2.0e-60 235.7 133 86.5
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 84.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 84.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 84.2
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 4.5e-60 234.6 133 82.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.7e-59 232.6 132 86.4
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 2.9e-59 231.9 132 84.1
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 3.8e-59 231.5 133 83.5
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 82.0
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 83.5
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.1e-58 229.9 131 83.2
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.1e-58 229.9 132 83.3
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.4e-58 229.6 133 82.7
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.9e-58 229.2 132 84.1
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 82.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 81.2
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 4.2e-58 228.0 133 82.0
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 7.2e-58 227.3 133 80.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.7
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 81.2
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 82.0
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 2.1e-57 225.7 133 79.7
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 81.2
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 82.0
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 80.5
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.4e-56 223.0 133 81.2
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.8e-56 222.6 134 83.6
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 78.9
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.9e-56 221.5 140 78.6
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 79.7
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 79.7
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 78.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 77.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.7e-54 216.1 133 77.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 6.3e-54 214.2 130 78.5
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 5.3e-53 211.1 139 77.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 76.7
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.0e-52 209.1 113 87.6
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 4.5e-52 208.0 128 75.0
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 5.9e-52 207.6 133 74.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.3e-51 206.5 133 72.9
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.0e-51 204.5 133 74.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 8.5e-51 203.8 133 73.7
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.1e-50 203.4 116 84.5
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 1.4e-50 203.0 176 59.7
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 3.2e-50 201.8 181 60.2
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.8e-48 196.1 133 69.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 1.8e-48 196.1 133 69.9
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 5.1e-48 194.5 133 68.4
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 5.1e-48 194.5 113 80.5
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 8.8e-48 193.7 118 75.4
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.5e-47 193.0 133 67.7
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.5e-47 193.0 128 77.3
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.0e-47 192.6 133 67.7
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 67.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 69.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 66.9
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 9.7e-47 190.3 133 67.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.2e-46 189.1 133 69.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 4.8e-46 188.0 133 66.9
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 8.2e-46 187.2 133 66.2
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 2.4e-45 185.7 196 52.6
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.2e-44 183.3 118 73.7
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 3.5e-44 181.8 128 68.0
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 9.4e-42 173.7 137 62.0
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 9.4e-42 173.7 136 61.0
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.6e-41 172.9 98 82.7
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 2.1e-41 172.6 105 77.1
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 3.6e-41 171.8 105 76.2
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 4.7e-41 171.4 100 79.0
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 3.0e-40 168.7 103 75.7
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 3.0e-40 168.7 121 63.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 8.8e-40 167.2 128 64.1
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.7e-38 162.9 105 74.3
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.1e-37 160.2 105 69.5
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 1.4e-37 159.8 98 76.5
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.6e-36 155.6 92 78.3
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 2.1e-33 146.0 133 62.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 2.0e-31 139.4 122 54.9
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.6e-31 139.0 133 57.9
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.2e-28 130.2 111 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.2e-25 120.2 113 52.2
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.2e-25 120.2 70 84.3
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.4e-21 105.9 102 48.0
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.6e-20 103.2 111 47.7
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 3.5e-20 102.1 63 74.6
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.7e-19 99.8 67 71.6
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 3.8e-19 98.6 111 45.9
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.2e-17 93.6 130 39.2
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 1.6e-12 76.6 68 57.4
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 5.6e-10 68.2 47 59.6
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 9.5e-10 67.4 76 42.1
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 2.8e-09 65.9 89 40.4
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.6e-09 65.5 55 61.8
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 7.5e-07 57.8 36 63.9
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 9.8e-07 57.4 34 61.8


User provided reference genes

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