Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 2.5e-104 382.9 332 100.0
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 5.2e-41 172.6 313 40.6
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.5e-35 153.7 195 58.5
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 8.1e-34 148.7 195 51.8
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 3.4e-32 143.3 309 38.5
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 3.4e-32 143.3 191 50.3
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 9.9e-32 141.7 198 57.1
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 3.2e-30 136.7 187 53.5
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 7.8e-29 132.1 200 51.0
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.0e-28 131.7 200 47.0
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 6.6e-28 129.0 209 45.9
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 1.5e-27 127.9 228 44.7
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 4.3e-27 126.3 191 48.2
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.3e-27 125.6 191 45.5
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.3e-27 125.6 201 46.3
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 1.2e-26 124.8 214 43.5
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.1e-26 124.0 187 50.8
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 2.1e-26 124.0 192 47.9
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.1e-26 124.0 203 46.3
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 6.2e-26 122.5 214 46.7
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 3.1e-25 120.2 197 46.2
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.1e-25 120.2 191 49.2
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 4.0e-25 119.8 198 44.9
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.3e-25 119.4 198 44.9
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 6.9e-25 119.0 189 42.3
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 6.9e-25 119.0 230 43.9
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 9.0e-25 118.6 196 46.4
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 9.0e-25 118.6 204 46.6
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.2e-24 118.2 191 48.7
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 3.4e-24 116.7 200 45.0
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 3.4e-24 116.7 200 45.0
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 4.4e-24 116.3 194 42.8
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 9.9e-24 115.2 196 46.9
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 1.3e-23 114.8 188 44.7
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 2.9e-23 113.6 193 42.5
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 3.8e-23 113.2 199 42.7
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 3.8e-23 113.2 202 43.1
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 1.1e-22 111.7 189 45.5
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 1.4e-22 111.3 194 44.8
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.4e-22 110.5 203 40.9
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 9.3e-22 108.6 192 47.4
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.1e-21 107.5 190 47.9
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 2.1e-21 107.5 198 42.9
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 2.1e-21 107.5 196 51.5
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 6.0e-21 105.9 195 48.7
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 6.0e-21 105.9 219 47.5
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 1.3e-20 104.8 195 47.2
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.7e-20 102.1 210 46.7
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 8.7e-20 102.1 189 39.2
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.5e-19 101.3 197 42.6
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.3e-19 100.1 210 45.7
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.3e-19 100.1 210 45.7
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 5.6e-19 99.4 213 38.5
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 9.6e-19 98.6 188 40.4
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 9.6e-19 98.6 189 43.9
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 2.8e-18 97.1 197 40.1
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 4.8e-18 96.3 190 48.9
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 4.8e-18 96.3 223 39.0
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 4.8e-18 96.3 195 49.2
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 6.2e-18 95.9 197 50.8
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 8.1e-18 95.5 190 39.5
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 4.0e-17 93.2 198 37.4
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 4.0e-17 93.2 203 35.0
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 5.3e-17 92.8 193 47.7
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.3e-17 92.8 218 41.3
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.3e-17 92.8 218 41.3
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 5.3e-17 92.8 198 35.4
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.5e-16 91.3 187 41.7
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.6e-16 90.5 187 38.0
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 3.4e-16 90.1 188 36.2
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 4.5e-16 89.7 215 44.2
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 5.8e-16 89.4 197 38.1
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 7.6e-16 89.0 170 45.3
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 7.6e-16 89.0 218 40.8
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.3e-15 88.2 188 37.2
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.3e-15 88.2 193 37.3
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 1.3e-15 88.2 189 40.7
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.7e-15 87.8 206 33.5
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 2.9e-15 87.0 219 39.3
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.9e-15 86.3 187 38.0
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 6.4e-15 85.9 189 35.4
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 8.4e-15 85.5 199 45.7
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 1.1e-14 85.1 200 45.0
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.2e-14 83.6 218 39.9
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 3.2e-14 83.6 196 44.9
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 4.2e-14 83.2 200 43.5
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 5.4e-14 82.8 192 39.6
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 7.1e-14 82.4 146 56.2
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 9.3e-14 82.0 191 37.2
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 1.6e-13 81.3 199 35.2
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.0e-13 79.3 183 39.9
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 7.9e-13 79.0 188 39.4
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.0e-12 78.6 203 34.0
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 1.3e-12 78.2 198 40.9
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.3e-12 77.4 195 35.4
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 5.1e-12 76.3 140 39.3
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 1.5e-11 74.7 216 33.3
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 1.9e-11 74.3 217 33.6
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 1.9e-11 74.3 200 33.0
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 1.9e-11 74.3 195 41.0
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 4.3e-11 73.2 194 35.6
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.6e-11 72.8 185 38.9
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 5.6e-11 72.8 195 33.3
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 7.4e-11 72.4 193 33.7
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 7.4e-11 72.4 190 42.6
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 9.6e-11 72.0 193 33.7
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 9.6e-11 72.0 193 33.7
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 9.6e-11 72.0 193 33.7
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 9.6e-11 72.0 199 35.7
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 1.3e-10 71.6 191 34.0
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 2.8e-10 70.5 187 42.2
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 6.2e-10 69.3 193 33.7
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 6.2e-10 69.3 193 33.7
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 6.2e-10 69.3 194 34.5
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 1.4e-09 68.2 186 31.7
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 2.4e-09 67.4 193 33.2
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 2.4e-09 67.4 190 38.4
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.4e-09 67.4 160 45.0
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 4.0e-09 66.6 197 34.5
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 1.2e-08 65.1 194 33.5
Ah.02g125610 Amaranthus hybridus HOM05D005407 ORTHO05D006544 2.0e-08 64.3 159 34.6
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 4.5e-08 63.2 194 34.0
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 7.6e-08 62.4 187 31.0
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 9.9e-08 62.0 126 42.1
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 1.3e-07 61.6 195 31.3
ATR0661G396 Amborella trichopoda HOM05D005407 ORTHO05D006544 2.2e-07 60.8 192 32.3
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 2.2e-07 60.8 193 32.6
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 2.9e-07 60.5 193 31.1
CDE02G0512 Ceratophyllum demersum HOM05D042405 ORTHO05D043904 2.9e-07 60.5 219 31.5
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 3.8e-07 60.1 189 31.7
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 6.4e-07 59.3 193 31.1
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 6.4e-07 59.3 193 31.1
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.9e-06 57.8 186 39.8
SEGI_38417 Sequoiadendron giganteum HOM05D019616 ORTHO05D023140 3.2e-06 57.0 203 31.0
CDE01G0807 Ceratophyllum demersum HOM05D042405 ORTHO05D043904 9.3e-06 55.5 189 32.3


User provided reference genes

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