Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02670 Aquilegia oxysepala HOM05D006838 ORTHO05D008915 2.1e-73 278.9 134 100.0
Aqoxy5G00461 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 3.7e-46 188.3 98 88.8
Aqoxy4G00384 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 5.4e-37 157.9 80 92.5
AUR62033621 Chenopodium quinoa HOM05D006838 ORTHO05D008915 5.0e-35 151.4 91 70.3
Sc13g0004470 Simmondsia chinensis HOM05D006838 ORTHO05D008915 6.6e-35 151.0 91 74.7
Hund12124 Selenicereus undatus HOM05D006838 ORTHO05D008915 8.6e-35 150.6 91 71.4
AUR62038604 Chenopodium quinoa HOM05D006838 ORTHO05D008915 4.3e-34 148.3 91 69.2
Nn4g26336 Nelumbo nucifera HOM05D006838 ORTHO05D008915 7.3e-34 147.5 98 70.4
EL10Ac3g06416 Beta vulgaris HOM05D006838 ORTHO05D008915 4.7e-33 144.8 91 70.3
TAR365G1174 Trochodendron aralioides HOM05D006838 ORTHO05D008915 1.4e-32 143.3 98 68.4
Dinv44539 Davidia involucrata HOM05D006838 ORTHO05D008915 3.1e-32 142.1 91 70.3
Gohir.A01G023700 Gossypium hirsutum HOM05D006838 ORTHO05D008915 2.0e-31 139.4 91 68.1
Gohir.D01G021700 Gossypium hirsutum HOM05D006838 ORTHO05D008915 2.0e-31 139.4 91 68.1
Gorai.002G024200 Gossypium raimondii HOM05D006838 ORTHO05D008915 2.0e-31 139.4 91 68.1
Ah.13g072770 Amaranthus hybridus HOM05D006838 ORTHO05D008915 3.4e-31 138.7 93 68.8
PGSC0003DMG400032255 Solanum tuberosum HOM05D006838 ORTHO05D008915 4.4e-31 138.3 116 59.5
CAN.G1094.4 Capsicum annuum HOM05D006838 ORTHO05D008915 9.8e-31 137.1 88 69.3
Manes.03G177700 Manihot esculenta HOM05D006838 ORTHO05D008915 1.7e-30 136.3 91 67.0
Duzib052G0907 Durio zibethinus HOM05D006838 ORTHO05D008915 2.2e-30 136.0 91 67.0
arahy.Tifrunner.gnm1.ann1.08EL86 Arachis hypogaea HOM05D006838 ORTHO05D008915 3.7e-30 135.2 92 68.5
Dinv13999 Davidia involucrata HOM05D006838 ORTHO05D008915 3.7e-30 135.2 91 70.3
Solyc09g082115.1 Solanum lycopersicum HOM05D006838 ORTHO05D008915 4.9e-30 134.8 116 56.9
arahy.Tifrunner.gnm1.ann1.00V3DL Arachis hypogaea HOM05D006838 ORTHO05D008915 6.4e-30 134.4 92 67.4
Cfa015659 Carpinus fangiana HOM05D006838 ORTHO05D008915 6.4e-30 134.4 90 67.8
FvH4_4g16340 Fragaria vesca HOM05D006838 ORTHO05D008915 6.4e-30 134.4 90 66.7
FAN12G2261 Fragaria x ananassa HOM05D006838 ORTHO05D008915 6.4e-30 134.4 90 66.7
Haze_00889 Corylus avellana HOM05D000001 ORTHO05D000003 8.3e-30 134.0 90 66.7
FAN17G0591 Fragaria x ananassa HOM05D006838 ORTHO05D008915 8.3e-30 134.0 90 66.7
Atru.chr4.2454 Acer truncatum HOM05D006838 ORTHO05D008915 1.4e-29 133.3 91 65.9
Sopen09g031000 Solanum pennellii HOM05D006838 ORTHO05D008915 1.4e-29 133.3 116 56.9
vmacro15346 Vaccinium macrocarpon HOM05D006838 ORTHO05D008915 1.4e-29 133.3 91 69.2
Actinidia08489 Actinidia chinensis HOM05D006838 ORTHO05D008915 1.9e-29 132.9 91 67.0
Ciclev10006131m.g Citrus clementina HOM05D006838 ORTHO05D008915 1.9e-29 132.9 91 68.1
Cc03_g03870 Coffea canephora HOM05D006838 ORTHO05D008915 1.9e-29 132.9 118 56.8
CSS0050318 Camellia sinensis var. sinensis HOM05D006838 ORTHO05D008915 2.4e-29 132.5 91 67.0
RcHm_v2.0_Chr4g0416051 Rosa chinensis HOM05D006838 ORTHO05D008915 2.4e-29 132.5 89 66.3
TWI73G0194 Tripterygium wilfordii HOM05D006838 ORTHO05D008915 2.4e-29 132.5 91 65.9
Ca_24400_v3 Cicer arietinum L. HOM05D006838 ORTHO05D008915 7.0e-29 131.0 123 52.8
MSTRG.4035 Avicennia marina HOM05D006838 ORTHO05D008915 9.2e-29 130.6 91 65.9
Nitab4.5_0000316g0010 Nicotiana tabacum HOM05D006838 ORTHO05D008915 1.6e-28 129.8 142 50.0
Nitab4.5_0001342g0050 Nicotiana tabacum HOM05D006838 ORTHO05D008915 1.6e-28 129.8 142 50.0
Aa31LG5G4930 Aethionema arabicum HOM05D006838 ORTHO05D008915 2.0e-28 129.4 91 63.7
PGR004G0798 Punica granatum HOM05D006838 ORTHO05D008915 2.0e-28 129.4 89 65.2
Thecc.04G232900 Theobroma cacao HOM05D006838 ORTHO05D008915 2.0e-28 129.4 91 65.9
DCAR_030640 Daucus carota HOM05D006838 ORTHO05D008915 2.7e-28 129.0 88 67.0
CANSAT78G0040 Cannabis sativa HOM05D006838 ORTHO05D008915 4.6e-28 128.3 89 62.9
Medtr5g006360 Medicago truncatula HOM05D006838 ORTHO05D008915 6.0e-28 127.9 87 64.4
MD13G1194100 Malus domestica HOM05D006838 ORTHO05D008915 7.8e-28 127.5 90 64.4
Psat4g210280 Pisum sativum HOM05D006838 ORTHO05D008915 7.8e-28 127.5 92 63.0
Rhsim02G0025700 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.3e-27 126.7 91 67.0
CsaV3_7G022460 Cucumis sativus L. HOM05D006838 ORTHO05D008915 2.3e-27 125.9 89 64.0
HanXRQChr10g0288871 Helianthus annuus HOM05D006838 ORTHO05D008915 2.3e-27 125.9 91 63.7
THA.LOC104816050 Tarenaya hassleriana HOM05D006838 ORTHO05D008915 2.3e-27 125.9 91 60.4
PSO832G4526 Papaver somniferum HOM05D006838 ORTHO05D008915 3.9e-27 125.2 97 59.8
Potri.010G087000 Populus trichocarpa HOM05D006838 ORTHO05D008915 3.9e-27 125.2 91 61.5
QL06p002133 Quercus lobata HOM05D006838 ORTHO05D008915 3.9e-27 125.2 90 63.3
ECA246G0107 Erigeron canadensis HOM05D006838 ORTHO05D008915 8.6e-27 124.0 90 62.2
Lsat_1_v5_gn_5_35600 Lactuca sativa HOM05D006838 ORTHO05D008915 8.6e-27 124.0 88 67.0
MBI11_g31274_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 8.6e-27 124.0 99 60.6
SalBow2G1460 Salvia bowleyana HOM05D001359 ORTHO05D001200 8.6e-27 124.0 136 47.1
SGA_v2.0_scaffold39G15215 Striga asiatica HOM05D006838 ORTHO05D008915 8.6e-27 124.0 90 62.2
PSO210G6947 Papaver somniferum HOM05D006838 ORTHO05D008915 1.1e-26 123.6 97 58.8
GSVIVG01017987001 Vitis vinifera HOM05D006838 ORTHO05D008915 1.1e-26 123.6 98 58.2
Peaxi162Scf00092g00717 Petunia axillaris HOM05D006838 ORTHO05D008915 1.5e-26 123.2 142 48.6
Cpa.g.sc58.98 Carica papaya HOM05D006838 ORTHO05D008915 1.9e-26 122.9 91 59.3
BcaB02g10450 Brassica carinata HOM05D006838 ORTHO05D008915 2.5e-26 122.5 83 62.7
Thhalv10017983m.g Eutrema salsugineum HOM05D006838 ORTHO05D008915 2.5e-26 122.5 83 62.7
Prupe.1G014900 Prunus persica HOM05D006838 ORTHO05D008915 3.3e-26 122.1 90 64.4
Eucgr.H03460 Eucalyptus grandis HOM05D006838 ORTHO05D008915 5.6e-26 121.3 128 50.8
Lsat_1_v5_gn_5_35680 Lactuca sativa HOM05D006838 ORTHO05D008915 5.6e-26 121.3 88 64.8
Sabra08G0117200 Salix brachista HOM05D006838 ORTHO05D008915 5.6e-26 121.3 91 61.5
TPR.G37905 Trifolium pratense HOM05D006838 ORTHO05D008915 5.6e-26 121.3 149 43.6
CARHR125890 Cardamine hirsuta HOM05D006838 ORTHO05D008915 7.3e-26 120.9 83 63.9
MELO3C012654.2 Cucumis melo HOM05D006838 ORTHO05D008915 7.3e-26 120.9 89 61.8
AL4G27470 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 1.6e-25 119.8 83 61.4
Sp4g14500 Schrenkiella parvula HOM05D006838 ORTHO05D008915 1.6e-25 119.8 139 44.6
Sed0026467 Sechium edule HOM05D006838 ORTHO05D008915 2.1e-25 119.4 89 60.7
LjContig00408g0014048 Lotus japonicus HOM05D006838 ORTHO05D008915 4.7e-25 118.2 89 58.4
AT2G32090 Arabidopsis thaliana HOM05D006838 ORTHO05D008915 6.2e-25 117.9 83 59.0
Eucgr.H03458 Eucalyptus grandis HOM05D006838 ORTHO05D008915 6.2e-25 117.9 128 49.2
AL103U10040 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 8.1e-25 117.5 83 61.4
C04p17530 Brassica napus HOM05D006838 ORTHO05D008915 1.1e-24 117.1 83 61.4
BolC4t23300H Brassica oleracea HOM05D006838 ORTHO05D008915 1.1e-24 117.1 83 61.4
A05p13410 Brassica napus HOM05D006838 ORTHO05D008915 2.3e-24 115.9 83 61.4
CiPaw.01G167000 Carya illinoinensis HOM05D006838 ORTHO05D008915 3.1e-24 115.5 90 58.9
MBI11_g31275_MAGBIO Magnolia biondii HOM05D006838 ORTHO05D008915 4.0e-24 115.2 92 59.8
BraA05t20279Z Brassica rapa HOM05D006838 ORTHO05D008915 6.8e-24 114.4 83 60.2
AagrBONN_evm.TU.Sc2ySwM_362.295 Anthoceros agrestis HOM05D006838 ORTHO05D008915 2.0e-23 112.8 99 48.5
MBI12_g03925_MAGBIO Magnolia biondii HOM05D006838 ORTHO05D008915 2.6e-23 112.5 92 58.7
Migut.G00344 Erythranthe guttata HOM05D006838 ORTHO05D008915 5.8e-23 111.3 83 61.4
SHI00446 Sapria himalayana HOM05D006838 ORTHO05D008915 7.5e-23 110.9 83 57.8
Carub.0004s1344 Capsella rubella HOM05D006838 ORTHO05D008915 1.3e-22 110.2 83 57.8
unitig_32.g11729 Utricularia gibba HOM05D006838 ORTHO05D008915 1.3e-22 110.2 89 58.4
Pp3c10_20820 Physcomitrium patens HOM05D006838 ORTHO05D008915 2.2e-22 109.4 95 52.6
SalBow2G1378 Salvia bowleyana HOM05D006838 ORTHO05D008915 3.7e-22 108.6 110 50.0
CDE05G3614 Ceratophyllum demersum HOM05D006838 ORTHO05D008915 8.3e-22 107.5 124 44.4
AagrBONN_evm.TU.Sc2ySwM_362.293 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-21 105.5 99 47.5
Actinidia36957 Actinidia chinensis HOM05D006838 ORTHO05D008915 4.6e-20 101.7 91 54.9
Medtr5g006370 Medicago truncatula HOM05D006838 ORTHO05D008915 7.8e-20 100.9 133 42.9
Mapoly0185s0021 Marchantia polymorpha HOM05D006838 ORTHO05D008915 1.3e-19 100.1 94 47.9
FvH4_1g03680 Fragaria vesca HOM05D006838 ORTHO05D008915 2.3e-19 99.4 145 40.7
RcHm_v2.0_Chr4g0416061 Rosa chinensis HOM05D006838 ORTHO05D008915 3.0e-19 99.0 94 46.8
RcHm_v2.0_Chr4g0409411 Rosa chinensis HOM05D006838 ORTHO05D008915 6.6e-19 97.8 136 40.4
FAN22G1840 Fragaria x ananassa HOM05D006838 ORTHO05D008915 1.1e-18 97.1 137 40.1
SEGI_21646 Sequoiadendron giganteum HOM05D006838 ORTHO05D008915 4.3e-18 95.1 91 49.5
FAN19G3212 Fragaria x ananassa HOM05D006838 ORTHO05D008915 1.6e-17 93.2 146 39.7
Os03g0659300 Oryza sativa ssp. japonica HOM05D006838 ORTHO05D008915 2.1e-17 92.8 93 48.4
Zm00001eb052640 Zea mays HOM05D006838 ORTHO05D008915 6.2e-17 91.3 93 50.5
COL.COLO4_21487 Corchorus olitorius HOM05D006838 ORTHO05D000003 3.1e-16 89.0 64 64.1
SMO304G0126 Selaginella moellendorffii HOM05D006838 ORTHO05D008915 3.1e-16 89.0 98 44.9
TPR.G14291 Trifolium pratense HOM05D006838 ORTHO05D008915 4.0e-16 88.6 142 39.4
ATR0697G082 Amborella trichopoda HOM05D006838 ORTHO05D008915 8.9e-16 87.4 86 50.0
TPR.G38007 Trifolium pratense HOM05D006838 ORTHO05D008915 5.8e-15 84.7 129 39.5
FAN17G0416 Fragaria x ananassa HOM05D006838 ORTHO05D001690 1.4e-13 80.1 118 38.1
HPP92_017391 Vanilla planifolia HOM05D006838 ORTHO05D008915 3.2e-13 79.0 76 48.7
FAN12G2595 Fragaria x ananassa HOM05D006838 ORTHO05D046149 3.9e-11 72.0 87 43.7
Sabra10G0056600 Salix brachista HOM05D006838 ORTHO05D008915 9.6e-10 67.4 52 57.7
Actinidia25664 Actinidia chinensis HOM05D006838 ORTHO05D008915 1.4e-08 63.5 39 66.7
Pp3c24_12430 Physcomitrium patens HOM05D006838 ORTHO05D008915 4.4e-07 58.5 84 34.5


User provided reference genes

Program Settings