Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 0.0e+00 1238.8 664 100.0
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 4.6e-214 748.4 656 64.3
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.0e-213 747.3 656 64.3
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 9.0e-202 707.6 649 60.1
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 8.4e-200 701.0 664 60.5
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 1.8e-197 693.3 642 60.3
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.0e-192 677.6 651 58.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 2.9e-192 676.0 655 59.1
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-190 670.2 668 57.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.9e-190 667.9 668 57.0
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 5.0e-184 648.7 648 57.1
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 6.5e-184 648.3 648 57.4
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.2e-183 644.8 689 56.0
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.3e-181 639.8 669 55.2
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 2.3e-181 639.8 659 56.0
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 3.9e-181 639.0 671 55.7
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 5.1e-181 638.6 650 58.2
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 9.7e-180 634.4 645 56.9
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 7.0e-178 628.2 652 56.0
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.2e-176 623.2 648 54.5
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 2.2e-176 623.2 641 55.5
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.2e-174 617.5 613 57.4
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.6e-174 617.1 655 55.4
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.7e-174 616.3 659 54.5
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 3.6e-174 615.9 640 55.5
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 3.0e-173 612.8 635 55.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.0e-173 612.5 643 55.7
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.5e-172 610.5 639 54.6
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 5.7e-172 608.6 635 55.0
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.1e-170 604.4 643 54.9
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 1.4e-170 604.0 651 54.2
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.3e-170 602.1 662 53.2
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 7.0e-170 601.7 662 53.2
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 9.1e-170 601.3 636 53.9
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 7.7e-169 598.2 650 54.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.7e-168 597.0 669 52.3
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.2e-168 596.7 646 53.9
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.2e-168 596.7 697 53.2
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.9e-168 596.3 707 49.9
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 3.8e-168 595.9 647 53.3
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 4.7e-166 589.0 643 52.9
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.4e-165 587.4 645 53.0
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 2.3e-165 586.6 644 53.3
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 5.7e-164 582.0 655 52.2
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 5.7e-164 582.0 643 54.4
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 5.7e-164 582.0 680 50.3
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 4.1e-162 575.9 635 52.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.9e-161 572.0 637 53.1
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.0e-160 571.2 641 52.3
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 6.5e-160 568.5 637 53.1
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.1e-159 567.8 609 54.8
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.6e-158 563.9 640 53.3
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.2e-157 558.9 789 44.7
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 4.4e-156 555.8 636 52.2
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.7e-155 552.7 640 51.9
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 8.3e-155 551.6 603 52.9
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 7.7e-153 545.0 680 47.6
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 4.3e-151 539.3 650 51.4
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 7.3e-151 538.5 650 50.8
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.6e-150 537.3 632 52.7
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.4e-146 524.2 638 49.2
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.4e-146 524.2 658 50.0
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 7.0e-146 521.9 669 48.6
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 3.5e-145 519.6 668 49.7
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 1.7e-144 517.3 761 44.7
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 2.3e-144 516.9 648 50.2
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.0e-144 516.5 641 48.2
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.1e-143 514.6 639 48.4
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 3.3e-143 513.1 642 48.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 3.3e-143 513.1 533 55.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 1.6e-142 510.8 638 48.0
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.1e-138 498.0 642 46.7
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.9e-138 497.3 637 48.2
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.3e-136 491.1 514 53.7
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.7e-136 490.7 631 48.3
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.9e-135 487.3 668 45.7
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 2.5e-135 486.9 672 45.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 7.3e-135 485.3 669 45.6
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 2.1e-134 483.8 669 45.4
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.1e-133 481.5 689 44.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.1e-133 481.5 603 48.6
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 4.4e-132 476.1 689 44.6
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 5.1e-128 462.6 440 58.6
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 7.6e-124 448.7 448 56.2
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 8.4e-123 445.3 455 54.3
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.2e-121 441.4 420 58.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.2e-121 441.4 661 43.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 5.1e-120 436.0 646 43.8
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 7.3e-119 432.2 645 43.4
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.4e-114 417.9 536 49.3
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.7e-112 411.0 647 41.0
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.5e-108 397.9 701 39.1
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 9.9e-108 395.2 650 41.7
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 2.8e-102 377.1 493 47.3
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.4e-101 374.8 504 47.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 4.0e-101 373.2 657 37.3
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.1e-98 365.2 645 37.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.5e-97 360.1 424 50.7
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.6e-97 359.8 636 38.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.3e-94 351.7 456 49.1
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 8.4e-91 339.0 502 42.6
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.4e-82 311.6 229 76.4
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.1e-79 302.0 503 39.8
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 7.7e-76 289.3 835 32.2
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.6e-65 255.0 294 55.1
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.7e-65 254.2 205 62.9
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.8e-59 233.8 268 55.6
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 2.5e-58 231.1 334 48.8
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 3.2e-58 230.7 821 29.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 5.7e-55 219.9 165 68.5
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.2e-54 218.0 206 57.3
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.1e-53 214.2 753 30.4
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.0e-48 199.1 162 63.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 5.7e-47 193.4 140 71.4
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 5.0e-35 153.7 195 48.2
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 4.6e-28 130.6 180 40.6
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 1.0e-27 129.4 327 33.3
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.5e-26 125.6 92 68.5
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.1e-21 107.5 94 64.9
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.4e-21 107.1 103 59.2
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.8e-20 103.2 90 67.8
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.3e-19 102.4 67 74.6
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.7e-11 75.5 109 39.4
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.1e-10 72.8 101 45.5
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.5e-10 71.6 47 72.3
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.8e-09 68.2 42 73.8
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 1.4e-08 65.9 85 40.0
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 9.9e-07 59.7 50 68.0
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 1.7e-06 58.9 41 73.2
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-06 58.9 132 37.1


User provided reference genes

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