Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.7e-177 625.9 331 100.0
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 5.7e-80 302.0 309 55.7
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 3.5e-69 266.2 258 54.3
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 1.3e-68 264.2 258 53.9
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 1.3e-68 264.2 258 53.9
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 2.9e-68 263.1 256 54.7
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 3.8e-68 262.7 256 53.9
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 3.8e-68 262.7 256 53.9
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 3.8e-68 262.7 256 55.5
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 5.0e-68 262.3 256 54.3
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 5.0e-68 262.3 256 53.9
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 5.0e-68 262.3 257 54.9
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 6.5e-68 261.9 256 54.7
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 6.5e-68 261.9 250 56.4
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 8.5e-68 261.5 256 53.9
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 8.5e-68 261.5 256 53.9
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 8.5e-68 261.5 256 53.9
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 1.1e-67 261.2 256 55.1
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 1.1e-67 261.2 256 54.3
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.9e-67 260.4 256 53.9
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 2.5e-67 260.0 256 54.3
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 4.2e-67 259.2 257 54.5
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 4.2e-67 259.2 256 53.5
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 4.2e-67 259.2 256 54.7
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 5.5e-67 258.8 268 53.0
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 7.2e-67 258.5 256 54.3
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 7.2e-67 258.5 256 53.9
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 9.4e-67 258.1 256 53.9
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 9.4e-67 258.1 256 53.9
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 9.4e-67 258.1 256 53.1
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 2.1e-66 256.9 300 48.3
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 2.7e-66 256.5 256 52.7
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 2.7e-66 256.5 258 53.5
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.6e-66 256.1 256 53.5
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.6e-66 256.1 256 53.9
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.6e-66 256.1 256 53.9
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 4.7e-66 255.8 256 53.1
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 4.7e-66 255.8 257 53.3
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 6.1e-66 255.4 257 53.3
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 6.1e-66 255.4 256 53.1
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 6.1e-66 255.4 256 53.5
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 8.0e-66 255.0 256 53.1
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 1.0e-65 254.6 238 55.9
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 53.9
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 52.3
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 52.3
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 53.1
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 53.5
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.4e-65 254.2 256 52.3
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 1.8e-65 253.8 256 53.9
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 1.8e-65 253.8 256 52.7
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 1.8e-65 253.8 256 52.7
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.8e-65 253.8 256 53.1
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 3.0e-65 253.1 256 52.0
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 4.0e-65 252.7 256 52.7
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 4.0e-65 252.7 257 52.5
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 5.2e-65 252.3 249 54.6
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 6.8e-65 251.9 256 52.0
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 6.8e-65 251.9 256 52.3
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 6.8e-65 251.9 256 51.6
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 8.8e-65 251.5 256 52.0
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 8.8e-65 251.5 256 52.3
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 1.5e-64 250.8 256 53.5
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 1.5e-64 250.8 256 50.4
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.5e-64 250.8 256 50.8
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 2.0e-64 250.4 256 51.6
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 3.4e-64 249.6 256 52.7
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 3.4e-64 249.6 256 52.7
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 3.4e-64 249.6 257 53.3
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 5.7e-64 248.8 256 50.8
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 7.5e-64 248.4 257 52.1
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 7.5e-64 248.4 255 51.8
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 7.5e-64 248.4 256 50.4
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 9.8e-64 248.1 250 52.4
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 1.3e-63 247.7 256 50.8
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.2e-63 246.9 310 46.8
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 2.8e-63 246.5 263 52.1
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 6.3e-63 245.4 256 50.8
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 6.3e-63 245.4 256 50.8
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 8.3e-63 245.0 238 54.2
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.1e-62 244.6 256 49.6
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.1e-62 244.6 246 53.3
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 1.8e-62 243.8 249 51.8
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 2.4e-62 243.4 257 50.6
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 5.4e-62 242.3 257 51.4
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 7.0e-62 241.9 256 50.0
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 9.1e-62 241.5 255 51.4
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 2.7e-61 240.0 238 53.4
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 2.7e-61 240.0 238 53.4
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 3.5e-61 239.6 256 49.6
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.7e-60 237.3 256 51.6
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 5.0e-60 235.7 256 48.8
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 6.5e-60 235.3 256 48.8
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 1.1e-59 234.6 310 45.5
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 7.2e-59 231.9 253 51.4
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 7.2e-59 231.9 300 45.0
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 1.5e-56 224.2 246 50.8
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 4.9e-55 219.2 255 47.5
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 8.3e-55 218.4 256 46.9
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 5.4e-54 215.7 256 46.5
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 1.6e-53 214.2 262 46.2
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 2.0e-53 213.8 255 45.5
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 1.0e-49 201.4 206 56.3
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 1.2e-48 198.0 173 59.5
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 1.2e-48 198.0 175 56.0
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 2.0e-48 197.2 175 55.4
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 9.8e-48 194.9 172 58.1
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 6.4e-47 192.2 229 49.8
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 8.3e-47 191.8 156 58.3
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 5.9e-45 185.7 258 43.4
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 8.6e-44 181.8 259 42.1
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 7.3e-43 178.7 196 52.6
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 4.7e-42 176.0 225 47.6
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.5e-40 171.0 237 40.9
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.9e-39 166.8 212 46.2
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 1.1e-38 164.9 201 47.3
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.4e-38 164.5 251 39.8
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 3.2e-38 163.3 186 50.5
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 2.7e-37 160.2 173 53.8
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 7.3e-27 125.6 184 41.3
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 7.8e-21 105.5 255 32.5
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 7.8e-21 105.5 136 44.1
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 5.1e-20 102.8 81 56.8
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 4.0e-09 66.6 104 40.4


User provided reference genes

Program Settings