Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02539 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 8.6e-54 213.4 107 100.0
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 4.9e-25 117.9 102 63.7
Aqoxy6G02540 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 3.7e-20 101.7 104 55.8
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 1.3e-17 93.2 92 51.1
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 1.3e-14 83.2 86 55.8
Dinv23033 Davidia involucrata HOM05D001896 ORTHO05D001862 3.9e-14 81.6 99 44.4
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.9e-13 79.3 87 50.6
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 1.9e-13 79.3 91 48.4
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 2.5e-13 79.0 109 41.3
PGSC0003DMG400021411 Solanum tuberosum HOM05D001896 ORTHO05D001862 2.5e-13 79.0 93 50.5
Nitab4.5_0000142g0290 Nicotiana tabacum HOM05D001896 ORTHO05D001862 4.3e-13 78.2 87 50.6
Solyc02g092190.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 5.6e-13 77.8 105 44.8
Sopen02g036760 Solanum pennellii HOM05D001896 ORTHO05D001862 5.6e-13 77.8 105 44.8
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 1.3e-12 76.6 87 48.3
PSO017G0117 Papaver somniferum HOM05D001896 ORTHO05D001862 1.3e-12 76.6 103 49.5
CAN.G1075.50 Capsicum annuum HOM05D001896 ORTHO05D001862 2.8e-12 75.5 84 53.6
PSO170G5938 Papaver somniferum HOM05D001896 ORTHO05D001862 3.7e-12 75.1 103 48.5
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 4.8e-12 74.7 97 43.3
DCAR_003516 Daucus carota HOM05D001896 ORTHO05D001862 4.8e-12 74.7 97 44.3
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 4.8e-12 74.7 95 41.1
TWI74G0977 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 1.8e-11 72.8 100 47.0
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 1.8e-11 72.8 98 37.8
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 2.4e-11 72.4 97 41.2
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 2.4e-11 72.4 100 40.0
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 3.1e-11 72.0 93 44.1
Oeu053665.1 Olea europaea HOM05D001896 ORTHO05D001862 4.0e-11 71.6 80 48.8
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 5.3e-11 71.2 105 38.1
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 5.3e-11 71.2 105 39.0
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 5.3e-11 71.2 86 45.3
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 5.3e-11 71.2 100 40.0
Duzib264G0605 Durio zibethinus HOM05D001896 ORTHO05D001862 6.9e-11 70.9 99 45.5
Nn1g09572 Nelumbo nucifera HOM05D001896 ORTHO05D001862 6.9e-11 70.9 96 40.6
Oeu054204.1 Olea europaea HOM05D001896 ORTHO05D001862 9.0e-11 70.5 80 48.8
ATR0739G076 Amborella trichopoda HOM05D001896 ORTHO05D001862 1.2e-10 70.1 83 51.8
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 1.2e-10 70.1 96 42.7
Cpa.g.c26343.5 Carica papaya HOM05D001896 ORTHO05D001862 1.5e-10 69.7 114 43.0
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 1.5e-10 69.7 91 44.0
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 1.5e-10 69.7 91 42.9
PGR031G2497 Punica granatum HOM05D001896 ORTHO05D001862 1.5e-10 69.7 78 43.6
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 2.6e-10 68.9 103 41.7
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 3.4e-10 68.6 100 36.0
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 4.5e-10 68.2 92 43.5
Rhsim08G0092500 Rhododendron simsii HOM05D001896 ORTHO05D001862 4.5e-10 68.2 92 38.0
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 5.8e-10 67.8 95 40.0
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 5.8e-10 67.8 94 34.0
Eucgr.I00689 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.0e-09 67.0 84 45.2
Glyma.17G159800 Glycine max HOM05D001896 ORTHO05D001862 1.0e-09 67.0 96 41.7
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.0e-09 67.0 81 48.1
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.3e-09 66.6 103 37.9
ClCG08G016610 Citrullus lanatus HOM05D001896 ORTHO05D001862 1.7e-09 66.2 87 44.8
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 1.7e-09 66.2 97 39.2
Potri.002G117100 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.7e-09 66.2 106 40.6
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 2.2e-09 65.9 68 50.0
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.9e-09 65.5 98 39.8
Atru.chr3.1040 Acer truncatum HOM05D001896 ORTHO05D001862 3.8e-09 65.1 103 40.8
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 3.8e-09 65.1 90 46.7
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 4.9e-09 64.7 99 42.4
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 6.5e-09 64.3 98 38.8
Phvul.003G233900 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 1.1e-08 63.5 87 42.5
Cpa.g.sc106.35 Carica papaya HOM05D001896 ORTHO05D001862 1.4e-08 63.2 78 44.9
CiPaw.01G002900 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.9e-08 62.8 84 41.7
Actinidia32848 Actinidia chinensis HOM05D001896 ORTHO05D001862 3.2e-08 62.0 100 39.0
Aqoxy4G03183 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 3.2e-08 62.0 85 38.8
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 4.2e-08 61.6 83 42.2
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 4.2e-08 61.6 83 42.2
Sopen02g036750 Solanum pennellii HOM05D001896 ORTHO05D001862 4.2e-08 61.6 77 48.1
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 7.1e-08 60.8 85 41.2
Sabra14G0008700 Salix brachista HOM05D001896 ORTHO05D001862 9.3e-08 60.5 84 42.9
Lalb_Chr08g0245301 Lupinus albus HOM05D001896 ORTHO05D001862 1.2e-07 60.1 77 42.9
Manes.18G048000 Manihot esculenta HOM05D001896 ORTHO05D001862 1.2e-07 60.1 98 41.8
Solyc02g092180.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 1.6e-07 59.7 78 46.2
Glyma.06G047600 Glycine max HOM05D001896 ORTHO05D001862 2.1e-07 59.3 99 37.4
Potri.014G014500 Populus trichocarpa HOM05D001896 ORTHO05D001862 2.1e-07 59.3 88 43.2
CiPaw.02G001600 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.7e-07 58.9 95 38.9
DCAR_010808 Daucus carota HOM05D001896 ORTHO05D001862 2.7e-07 58.9 93 38.7
Lj1g0008502 Lotus japonicus HOM05D001896 ORTHO05D001862 2.7e-07 58.9 95 35.8
Manes.05G182700 Manihot esculenta HOM05D001896 ORTHO05D001862 2.7e-07 58.9 83 43.4
Duzib041G0206 Durio zibethinus HOM05D001896 ORTHO05D001862 3.5e-07 58.5 106 39.6
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 3.5e-07 58.5 106 40.6
TPR.G33724 Trifolium pratense HOM05D001896 ORTHO05D001862 3.5e-07 58.5 98 37.8
CANSAT01G1870 Cannabis sativa HOM05D001896 ORTHO05D001862 4.6e-07 58.2 106 38.7
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.6e-07 58.2 106 36.8
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 4.6e-07 58.2 110 31.8
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 4.6e-07 58.2 98 30.6
Cc07_g07270 Coffea canephora HOM05D001896 ORTHO05D001862 6.0e-07 57.8 103 35.9
Duzib093G0976 Durio zibethinus HOM05D001896 ORTHO05D001862 7.9e-07 57.4 86 41.9
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 7.9e-07 57.4 106 34.9
Manes.10G086100 Manihot esculenta HOM05D001896 ORTHO05D001862 7.9e-07 57.4 84 46.4
Potri.014G014600 Populus trichocarpa HOM05D001896 ORTHO05D001862 7.9e-07 57.4 105 39.0
Ciclev10026650m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.0e-06 57.0 83 38.6
Gohir.D01G110900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.0e-06 57.0 97 40.2
Gorai.002G135700 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.0e-06 57.0 97 40.2
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 1.0e-06 57.0 85 36.5
VMungo0251G2220 Vigna mungo HOM05D001896 ORTHO05D001862 1.0e-06 57.0 80 40.0
Dinv44941 Davidia involucrata HOM05D001896 ORTHO05D001862 1.3e-06 56.6 91 37.4
Migut.H00334 Erythranthe guttata HOM05D001896 ORTHO05D001862 1.3e-06 56.6 91 35.2
Cpa.g.sc142.51 Carica papaya HOM05D001896 ORTHO05D001862 1.8e-06 56.2 90 42.2
DCAR_010809 Daucus carota HOM05D001896 ORTHO05D001862 1.8e-06 56.2 76 43.4
Glyma.04G046800 Glycine max HOM05D001896 ORTHO05D001862 1.8e-06 56.2 96 35.4
Potri.007G006100 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.8e-06 56.2 91 37.4
Cc10_g05130 Coffea canephora HOM05D001896 ORTHO05D001862 2.3e-06 55.8 96 37.5
Gohir.A01G123300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.3e-06 55.8 91 39.6
PGR004G2665 Punica granatum HOM05D001896 ORTHO05D001862 2.3e-06 55.8 85 37.6
Sabra07G0004400 Salix brachista HOM05D001896 ORTHO05D001862 2.3e-06 55.8 91 37.4
Migut.L00422 Erythranthe guttata HOM05D001896 ORTHO05D001862 3.0e-06 55.5 93 36.6
Phvul.009G073000 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 3.0e-06 55.5 93 36.6
Potri.014G006300 Populus trichocarpa HOM05D001896 ORTHO05D001862 3.0e-06 55.5 96 37.5
AL7G12990 Arabidopsis lyrata HOM05D012766 ORTHO05D014775 3.9e-06 55.1 85 38.8
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 3.9e-06 55.1 92 34.8
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 3.9e-06 55.1 82 40.2
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 3.9e-06 55.1 84 39.3
ClCG01G017710 Citrullus lanatus HOM05D001896 ORTHO05D001862 5.1e-06 54.7 90 40.0
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 5.1e-06 54.7 101 34.7
Lj4C73T24 Lonicera japonica HOM05D001896 ORTHO05D001862 5.1e-06 54.7 76 42.1
CiPaw.05G020300 Carya illinoinensis HOM05D001896 ORTHO05D001862 6.7e-06 54.3 68 35.3
MELO3C007649.2 Cucumis melo HOM05D001896 ORTHO05D001862 6.7e-06 54.3 91 40.7
VMungo1309G2110 Vigna mungo HOM05D001896 ORTHO05D001862 6.7e-06 54.3 93 35.5
Ah.15g097370 Amaranthus hybridus HOM05D001896 ORTHO05D001862 8.7e-06 53.9 82 40.2
A02p44110 Brassica napus HOM05D007502 ORTHO05D011692 8.7e-06 53.9 74 40.5
C02p64370 Brassica napus HOM05D007502 ORTHO05D011692 8.7e-06 53.9 74 40.5
BolC2t12501H Brassica oleracea HOM05D007502 ORTHO05D011692 8.7e-06 53.9 74 40.5
BraA02t09334Z Brassica rapa HOM05D007502 ORTHO05D011692 8.7e-06 53.9 74 40.5
CANSAT25G3829 Cannabis sativa HOM05D001896 ORTHO05D001862 8.7e-06 53.9 83 39.8
Gohir.D05G214500 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.7e-06 53.9 106 35.8
Lalb_Chr22g0355731 Lupinus albus HOM05D001896 ORTHO05D001862 8.7e-06 53.9 98 35.7
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 8.7e-06 53.9 81 40.7
TPR.G24259 Trifolium pratense HOM05D001896 ORTHO05D001862 8.7e-06 53.9 83 43.4


User provided reference genes

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