Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.7e-85 319.3 159 100.0
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 9.8e-70 266.9 138 96.4
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 6.2e-24 114.8 112 58.0
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 7.6e-22 107.8 109 57.8
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 8.4e-21 104.4 113 54.9
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 4.2e-20 102.1 113 53.1
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.1e-19 99.8 105 50.5
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 2.1e-19 99.8 122 48.4
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.7e-19 99.4 120 54.2
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 4.6e-19 98.6 107 55.1
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 7.8e-19 97.8 108 46.3
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.3e-18 97.1 126 48.4
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.3e-18 96.3 120 48.3
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 3.9e-18 95.5 127 46.5
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.9e-17 93.2 109 50.5
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 7.3e-17 91.3 109 51.4
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 9.6e-17 90.9 133 42.9
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 9.6e-17 90.9 107 49.5
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.3e-16 90.5 107 48.6
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.3e-16 90.5 101 54.5
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 4.8e-16 88.6 103 50.5
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 4.8e-16 88.6 116 45.7
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.8e-15 86.7 107 46.7
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.8e-15 86.7 116 47.4
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 1.8e-15 86.7 107 47.7
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 3.1e-15 85.9 110 50.0
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 3.1e-15 85.9 119 46.2
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.0e-15 85.5 107 46.7
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.5e-14 83.6 110 48.2
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.5e-14 83.6 116 47.4
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 4.4e-14 82.0 125 45.6
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 4.4e-14 82.0 134 43.3
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 7.6e-14 81.3 139 37.4
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 7.6e-14 81.3 100 47.0
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.3e-13 80.5 100 45.0
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 1.7e-13 80.1 81 53.1
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 2.9e-13 79.3 116 44.8
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 3.8e-13 79.0 99 50.5
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 6.4e-13 78.2 133 40.6
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 6.4e-13 78.2 129 45.0
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 6.4e-13 78.2 123 43.9
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 1.4e-12 77.0 101 48.5
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.9e-12 76.6 83 50.6
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 5.4e-12 75.1 88 48.9
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 5.4e-12 75.1 88 47.7
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.6e-11 73.6 129 40.3
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.7e-11 72.8 118 42.4
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 2.7e-11 72.8 112 43.8
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 4.6e-11 72.0 121 40.5
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 4.6e-11 72.0 130 40.8
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 4.6e-11 72.0 117 45.3
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 7.9e-11 71.2 137 38.0
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.7e-10 70.1 115 37.4
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.3e-10 69.7 113 47.8
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 3.0e-10 69.3 112 42.0
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 5.1e-10 68.6 116 42.2
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 6.6e-10 68.2 120 38.3
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 8.7e-10 67.8 110 40.0
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 8.7e-10 67.8 108 45.4
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 1.1e-09 67.4 90 44.4
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 1.1e-09 67.4 86 46.5
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 1.5e-09 67.0 119 39.5
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.3e-09 65.9 118 39.8
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 3.3e-09 65.9 120 45.0
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 3.3e-09 65.9 123 41.5
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 4.3e-09 65.5 94 41.5
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 5.6e-09 65.1 107 42.1
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.3e-08 63.9 82 51.2
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-08 63.5 123 31.7
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.1e-08 63.2 79 48.1
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 2.8e-08 62.8 125 40.0
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.2e-08 61.6 92 50.0
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.2e-08 61.6 92 50.0
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 6.2e-08 61.6 125 36.8
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea HOM05D005317 ORTHO05D005146 1.1e-07 60.8 42 69.0
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 1.1e-07 60.8 105 41.9
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 1.1e-07 60.8 119 33.6
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.8e-07 60.1 109 39.4
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-07 60.1 104 48.1
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.8e-07 60.1 104 48.1
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.8e-07 60.1 114 37.7
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 1.8e-07 60.1 146 34.9
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.4e-07 59.7 84 44.0
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 2.4e-07 59.7 119 37.0
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.4e-07 59.7 113 46.9
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 2.4e-07 59.7 90 44.4
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 3.1e-07 59.3 112 39.3
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.0e-07 58.9 122 36.1
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.0e-07 58.9 114 32.5
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea HOM05D005317 ORTHO05D005146 5.3e-07 58.5 96 42.7
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 5.3e-07 58.5 138 35.5
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 5.3e-07 58.5 138 35.5
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 6.9e-07 58.2 124 33.9
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.9e-07 58.2 122 38.5
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.2e-06 57.4 109 35.8
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.2e-06 57.4 137 35.8
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 1.5e-06 57.0 65 49.2
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 1.5e-06 57.0 90 45.6
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.4e-06 55.8 109 35.8
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.5e-06 55.5 109 35.8
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 5.8e-06 55.1 99 41.4
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 7.6e-06 54.7 113 39.8
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 7.6e-06 54.7 74 47.3
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 7.6e-06 54.7 121 34.7


User provided reference genes

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