Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02489 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 1.5e-155 552.7 271 100.0
Aqoxy6G02459 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 7.5e-155 550.4 269 100.0
TAR375G0732 Trochodendron aralioides HOM05D005840 ORTHO05D007144 2.5e-81 306.2 280 63.2
PSO063G5360 Papaver somniferum HOM05D005840 ORTHO05D007144 1.1e-76 290.8 222 66.7
Nn3g18788 Nelumbo nucifera HOM05D005840 ORTHO05D007144 7.0e-76 288.1 233 64.8
PSO782G2283 Papaver somniferum HOM05D005840 ORTHO05D007144 2.6e-75 286.2 209 67.5
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 1.5e-73 280.4 277 56.7
CANSAT21G1965 Cannabis sativa HOM05D005840 ORTHO05D007144 9.4e-73 277.7 278 56.1
Prupe.2G319100 Prunus persica HOM05D005840 ORTHO05D007144 9.4e-73 277.7 252 60.7
CiPaw.06G041000 Carya illinoinensis HOM05D005840 ORTHO05D007144 5.2e-71 271.9 216 63.4
FAN10G3655 Fragaria x ananassa HOM05D005840 ORTHO05D007144 5.7e-70 268.5 261 57.5
QL09p007163 Quercus lobata HOM05D005840 ORTHO05D007144 1.7e-69 266.9 264 57.2
Rhsim03G0215700 Rhododendron simsii HOM05D005840 ORTHO05D007144 1.7e-69 266.9 212 62.7
Gohir.D11G016500 Gossypium hirsutum HOM05D005840 ORTHO05D007144 2.2e-69 266.5 221 62.4
FvH4_7g32940 Fragaria vesca HOM05D005840 ORTHO05D007144 2.8e-69 266.2 246 58.9
CSS0020402 Camellia sinensis var. sinensis HOM05D005840 ORTHO05D007144 3.7e-69 265.8 207 64.7
Duzib084G0063 Durio zibethinus HOM05D005840 ORTHO05D007144 4.8e-69 265.4 222 62.2
Gohir.A11G016700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 4.8e-69 265.4 217 63.6
Manes.01G043400 Manihot esculenta HOM05D005840 ORTHO05D007144 4.8e-69 265.4 228 62.3
RcHm_v2.0_Chr1g0382901 Rosa chinensis HOM05D005840 ORTHO05D007144 4.8e-69 265.4 249 58.2
FAN10G0422 Fragaria x ananassa HOM05D005840 ORTHO05D007144 6.3e-69 265.0 247 58.3
Sed0003210 Sechium edule HOM05D005840 ORTHO05D007144 6.3e-69 265.0 263 55.5
Gorai.007G017300 Gossypium raimondii HOM05D005840 ORTHO05D007144 8.2e-69 264.6 221 62.9
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla HOM05D005840 ORTHO05D007144 1.1e-68 264.2 211 63.0
Thecc.03G209000 Theobroma cacao HOM05D005840 ORTHO05D007144 1.8e-68 263.5 227 59.0
MD01G1228500 Malus domestica HOM05D005840 ORTHO05D007144 3.1e-68 262.7 251 55.8
Ah.13g070770 Amaranthus hybridus HOM05D005840 ORTHO05D007144 4.1e-68 262.3 266 56.4
PGSC0003DMG400000562 Solanum tuberosum HOM05D005840 ORTHO05D007144 5.3e-68 261.9 280 52.5
MD07G1299300 Malus domestica HOM05D005840 ORTHO05D007144 9.1e-68 261.2 202 65.3
PGR042G3207 Punica granatum HOM05D005840 ORTHO05D007144 1.2e-67 260.8 223 60.1
Gohir.A08G104700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.6e-67 260.4 203 66.0
Lalb_Chr08g0239571 Lupinus albus HOM05D005840 ORTHO05D007144 1.6e-67 260.4 253 54.9
ClCG01G000060 Citrullus lanatus HOM05D005840 ORTHO05D007144 2.0e-67 260.0 225 60.4
Haze_00300 Corylus avellana HOM05D005840 ORTHO05D007144 2.0e-67 260.0 211 62.6
FAN03G2485 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.0e-67 260.0 261 56.3
Solyc03g081220.1 Solanum lycopersicum HOM05D005840 ORTHO05D007144 2.0e-67 260.0 280 51.4
Cpa.g.sc3.150 Carica papaya HOM05D005840 ORTHO05D007144 2.7e-67 259.6 217 60.8
Ca_16781_v3 Cicer arietinum L. HOM05D005840 ORTHO05D007144 2.7e-67 259.6 237 56.5
Peaxi162Scf00912g10012 Petunia axillaris HOM05D005840 ORTHO05D007144 2.7e-67 259.6 219 60.7
Oeu055391.1 Olea europaea HOM05D005840 ORTHO05D007144 4.5e-67 258.8 232 56.9
Sopen03g021950 Solanum pennellii HOM05D005840 ORTHO05D007144 5.9e-67 258.5 280 52.1
Medtr3g092810 Medicago truncatula HOM05D005840 ORTHO05D007144 1.0e-66 257.7 209 61.7
MBI12_g45814_MAGBIO Magnolia biondii HOM05D005840 ORTHO05D007144 2.2e-66 256.5 226 59.7
Nitab4.5_0000319g0020 Nicotiana tabacum HOM05D005840 ORTHO05D007144 2.2e-66 256.5 276 51.8
Cc02_g00800 Coffea canephora HOM05D005840 ORTHO05D007144 2.9e-66 256.1 231 59.7
COL.COLO4_14373 Corchorus olitorius HOM05D005840 ORTHO05D007144 3.8e-66 255.8 206 62.6
Gorai.004G125300 Gossypium raimondii HOM05D005840 ORTHO05D007144 3.8e-66 255.8 225 60.4
Lalb_Chr23g0271941 Lupinus albus HOM05D005840 ORTHO05D007144 5.0e-66 255.4 274 52.6
CAN.G303.23 Capsicum annuum HOM05D005840 ORTHO05D007144 6.5e-66 255.0 237 56.1
Nitab4.5_0010809g0010 Nicotiana tabacum HOM05D005840 ORTHO05D007144 6.5e-66 255.0 276 51.8
Ciclev10021557m.g Citrus clementina HOM05D005840 ORTHO05D007144 1.1e-65 254.2 230 59.1
Lsat_1_v5_gn_9_49980 Lactuca sativa HOM05D005840 ORTHO05D007144 1.5e-65 253.8 270 50.7
Atru.chr12.2435 Acer truncatum HOM05D005840 ORTHO05D007144 9.4e-65 251.1 221 63.3
Aa31LG11G3710 Aethionema arabicum HOM05D005840 ORTHO05D007144 9.4e-65 251.1 220 56.8
AUR62028079 Chenopodium quinoa HOM05D005840 ORTHO05D007144 1.2e-64 250.8 241 57.7
DCAR_008987 Daucus carota HOM05D005840 ORTHO05D007144 1.2e-64 250.8 259 53.3
Potri.015G002500 Populus trichocarpa HOM05D005840 ORTHO05D007144 1.2e-64 250.8 231 58.0
Sabra15G0001600 Salix brachista HOM05D005840 ORTHO05D007144 1.2e-64 250.8 261 54.4
MELO3C005919.2 Cucumis melo HOM05D005840 ORTHO05D007144 1.6e-64 250.4 255 53.7
Phvul.009G044800 Phaseolus vulgaris HOM05D005840 ORTHO05D007144 1.6e-64 250.4 219 59.4
FAN01G0139 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.1e-64 250.0 228 59.6
Psat5g071840 Pisum sativum HOM05D005840 ORTHO05D007144 4.7e-64 248.8 243 53.9
AL6G36040 Arabidopsis lyrata HOM05D005840 ORTHO05D007144 6.1e-64 248.4 216 57.9
VMungo1309G2416 Vigna mungo HOM05D005840 ORTHO05D007144 6.1e-64 248.4 219 58.4
BcaB04g19821 Brassica carinata HOM05D005840 ORTHO05D007144 8.0e-64 248.1 217 59.0
C07p43220 Brassica napus HOM05D005840 ORTHO05D007144 8.0e-64 248.1 217 59.0
TPR.G33360 Trifolium pratense HOM05D005840 ORTHO05D007144 8.0e-64 248.1 243 54.3
EL10Ac3g05171 Beta vulgaris HOM05D005840 ORTHO05D007144 1.0e-63 247.7 213 61.0
CDE04G1956 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.0e-63 247.7 221 61.1
CDE12G0905 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.0e-63 247.7 222 61.7
AUR62005991 Chenopodium quinoa HOM05D005840 ORTHO05D007144 1.0e-63 247.7 241 56.8
Actinidia34271 Actinidia chinensis HOM05D005840 ORTHO05D007144 1.4e-63 247.3 200 64.0
A06p35290 Brassica napus HOM05D005840 ORTHO05D007144 1.4e-63 247.3 208 60.6
Lsat_1_v5_gn_2_135020 Lactuca sativa HOM05D005840 ORTHO05D007144 1.8e-63 246.9 267 53.9
Sc19g0000580 Simmondsia chinensis HOM05D005840 ORTHO05D007144 1.8e-63 246.9 220 55.0
Carub.0006s2229 Capsella rubella HOM05D005840 ORTHO05D007144 2.3e-63 246.5 215 59.1
Sp2g22870 Schrenkiella parvula HOM05D005840 ORTHO05D007144 2.3e-63 246.5 220 58.2
CARHR188950 Cardamine hirsuta HOM05D005840 ORTHO05D007144 3.0e-63 246.1 220 56.8
vmacro22785 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 5.2e-63 245.4 304 47.0
BraA06t26455Z Brassica rapa HOM05D005840 ORTHO05D007144 6.8e-63 245.0 225 57.8
Lj3P895T18 Lonicera japonica HOM05D005840 ORTHO05D007144 6.8e-63 245.0 212 60.4
Oeu023690.1 Olea europaea HOM05D005840 ORTHO05D007144 6.8e-63 245.0 273 51.3
Thhalv10005309m.g Eutrema salsugineum HOM05D005840 ORTHO05D007144 8.8e-63 244.6 216 58.3
Glyma.06G136800 Glycine max HOM05D005840 ORTHO05D007144 8.8e-63 244.6 219 57.5
CsaV3_5G000100 Cucumis sativus L. HOM05D005840 ORTHO05D007144 1.2e-62 244.2 253 53.8
MSTRG.8611 Avicennia marina HOM05D005840 ORTHO05D007144 1.5e-62 243.8 230 55.7
TWI14G0550 Tripterygium wilfordii HOM05D005840 ORTHO05D007144 1.5e-62 243.8 253 53.4
AT5G24460 Arabidopsis thaliana HOM05D005840 ORTHO05D007144 2.0e-62 243.4 211 59.2
BolC9t53635H Brassica oleracea HOM05D005840 ORTHO05D007144 2.0e-62 243.4 213 58.2
Lj1g0001826 Lotus japonicus HOM05D005840 ORTHO05D007144 4.4e-62 242.3 209 58.4
Glyma.04G228100 Glycine max HOM05D005840 ORTHO05D007144 5.7e-62 241.9 221 57.5
SGA_v2.0_scaffold18G08468 Striga asiatica HOM05D005840 ORTHO05D007144 5.7e-62 241.9 218 57.8
BcaC04g23543 Brassica carinata HOM05D005840 ORTHO05D007144 1.3e-61 240.7 213 57.3
C09p07230 Brassica napus HOM05D005840 ORTHO05D007144 1.3e-61 240.7 213 57.3
A09p06480 Brassica napus HOM05D005840 ORTHO05D007144 2.8e-61 239.6 216 56.0
MSTRG.26975 Avicennia marina HOM05D005840 ORTHO05D007144 4.8e-61 238.8 237 54.4
HanXRQChr10g0305331 Helianthus annuus HOM05D005840 ORTHO05D007144 6.3e-61 238.4 210 58.6
BraA09t36291Z Brassica rapa HOM05D005840 ORTHO05D007144 8.3e-61 238.0 213 56.3
ECA232G4892 Erigeron canadensis HOM05D005840 ORTHO05D007144 3.1e-60 236.1 213 57.3
Migut.F00150 Erythranthe guttata HOM05D005840 ORTHO05D007144 3.1e-60 236.1 238 53.4
BcaNung01236 Brassica carinata HOM05D005840 ORTHO05D007144 4.1e-60 235.7 208 58.7
vmacro06444 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 7.0e-60 235.0 267 48.3
THA.LOC104798983 Tarenaya hassleriana HOM05D005840 ORTHO05D007144 2.7e-59 233.0 222 57.7
Sed0025728 Sechium edule HOM05D005840 ORTHO05D007144 7.7e-59 231.5 211 57.8
unitig_37.g11995 Utricularia gibba HOM05D005840 ORTHO05D007144 1.7e-58 230.3 213 53.1
SalBow6G2506 Salvia bowleyana HOM05D005840 ORTHO05D007144 4.2e-57 225.7 239 53.6
Actinidia08699 Actinidia chinensis HOM05D005840 ORTHO05D007144 2.8e-56 223.0 214 54.7
HPP92_022381 Vanilla planifolia HOM05D005840 ORTHO05D007144 4.4e-54 215.7 212 58.0
unitig_0.g2444 Utricularia gibba HOM05D005840 ORTHO05D007144 1.9e-49 200.3 203 50.7
unitig_92.g28240 Utricularia gibba HOM05D005840 ORTHO05D007144 1.9e-49 200.3 205 51.2
ATR0661G235 Amborella trichopoda HOM05D005840 ORTHO05D007144 9.5e-49 198.0 208 54.3
SEGI_38224 Sequoiadendron giganteum HOM05D005840 ORTHO05D007144 2.0e-46 190.3 214 47.2
Cc11_g13290 Coffea canephora HOM05D005840 ORTHO05D007144 9.8e-46 188.0 176 59.7
SHI02291 Sapria himalayana HOM05D005840 ORTHO05D007144 1.9e-44 183.7 206 49.5
COL.COLO4_35601 Corchorus olitorius HOM05D005840 ORTHO05D007144 4.6e-43 179.1 210 47.6
BcaB04g19819 Brassica carinata HOM05D005840 ORTHO05D007144 6.6e-42 175.3 159 56.0
Zm00001eb272540 Zea mays HOM05D005840 ORTHO05D007144 5.2e-39 165.6 212 47.6
Os06g0712200 Oryza sativa ssp. japonica HOM05D005840 ORTHO05D007144 5.8e-38 162.2 225 45.8
SMO140G0013 Selaginella moellendorffii HOM05D005840 ORTHO05D007144 1.2e-35 154.5 222 42.8
COL.COLO4_12096 Corchorus olitorius HOM05D005840 ORTHO05D007144 7.8e-35 151.8 174 52.3
Mapoly0031s0111 Marchantia polymorpha HOM05D005840 ORTHO05D007144 1.0e-34 151.4 212 43.4
Pp3c3_29470 Physcomitrium patens HOM05D005840 ORTHO05D007144 1.2e-32 144.4 236 41.9
BcaNung02020 Brassica carinata HOM05D005840 ORTHO05D007144 8.1e-32 141.7 130 58.5
CBR_g20004 Chara braunii HOM05D005840 ORTHO05D007144 2.9e-29 133.3 172 47.7
Gohir.D08G116401 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.9e-25 120.6 106 60.4
BcaB04g19822 Brassica carinata HOM05D005840 ORTHO05D007144 2.8e-24 116.7 118 54.2
Duzib114G0266 Durio zibethinus HOM05D005840 ORTHO05D007144 1.3e-21 107.8 154 44.8
Potri.010G149800 Populus trichocarpa HOM05D005840 ORTHO05D007144 1.5e-17 94.4 78 56.4
COL.COLO4_35602 Corchorus olitorius HOM05D005840 ORTHO05D007144 2.1e-16 90.5 92 51.1
Cre01.g012300 Chlamydomonas reinhardtii HOM05D005840 ORTHO05D007144 1.1e-15 88.2 184 35.9
MCO06G087 Micromonas commoda HOM05D005840 ORTHO05D007144 9.0e-15 85.1 202 34.2
SalBow4G0698 Salvia bowleyana HOM05D001856 ORTHO05D007144 6.4e-13 79.0 73 52.1
CAN.G2.4 Capsicum annuum HOM05D005840 ORTHO05D007144 6.6e-10 68.9 81 45.7
SalBow6G2140 Salvia bowleyana HOM05D005840 ORTHO05D007144 6.6e-10 68.9 53 58.5


User provided reference genes

Program Settings