Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 2.9e-219 765.0 406 100.0
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 9.4e-77 291.6 407 47.7
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 9.5e-69 265.0 404 43.1
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.5e-63 246.5 407 43.7
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-57 228.0 402 39.1
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 3.3e-53 213.4 400 38.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 5.6e-53 212.6 402 39.6
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.8e-51 207.6 435 39.5
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 3.2e-48 196.8 396 38.4
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.2e-47 194.9 411 37.5
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.6e-47 194.5 391 36.3
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 4.6e-47 193.0 438 39.0
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.7e-46 191.0 390 36.2
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.1e-46 189.5 401 38.7
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.0e-43 179.9 380 38.9
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.0e-42 177.6 400 37.2
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.9e-42 175.3 385 35.8
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.9e-41 172.9 387 35.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 8.3e-41 172.2 384 35.4
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.1e-40 169.9 397 36.5
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.2e-39 168.3 411 35.8
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 1.1e-37 161.8 415 33.5
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.6e-36 157.9 403 35.5
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.1e-36 157.5 398 34.7
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.8e-36 157.1 398 34.9
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.7e-33 147.9 392 32.1
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.8e-33 146.7 282 37.6
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-32 144.4 403 35.2
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-32 144.4 403 35.2
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.9e-32 144.4 397 32.7
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 4.2e-32 143.3 399 30.8
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.4e-32 142.9 399 33.1
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-31 141.7 407 34.9
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.7e-31 140.6 319 37.0
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.0e-30 138.7 404 33.4
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.7e-30 137.9 409 32.3
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 3.0e-30 137.1 400 32.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.1e-29 135.2 399 33.1
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.9e-29 134.4 396 32.8
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.9e-29 134.4 404 33.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.5e-29 134.0 409 31.1
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 7.3e-29 132.5 408 30.4
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.8e-28 130.6 391 33.5
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.6e-28 130.2 411 30.4
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 3.6e-28 130.2 409 30.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.1e-27 128.6 393 32.8
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 4.0e-27 126.7 391 30.9
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 5.3e-27 126.3 401 31.7
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 5.3e-27 126.3 399 31.6
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.2e-26 125.2 150 46.0
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.5e-26 124.8 393 31.3
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 2.6e-26 124.0 405 29.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.8e-26 122.9 393 30.5
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 9.9e-26 122.1 401 30.7
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.3e-25 121.7 401 30.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.7e-25 121.3 407 29.2
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-25 121.3 401 30.4
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.2e-25 120.9 405 30.1
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 6.4e-25 119.4 399 29.8
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.1e-24 118.6 389 29.6
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.4e-24 118.2 402 28.4
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.4e-24 116.3 410 29.8
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 7.1e-24 115.9 396 29.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.3e-24 115.5 397 30.0
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.2e-23 115.2 385 30.4
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.2e-23 115.2 382 30.9
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 3.5e-23 113.6 382 30.9
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 4.6e-23 113.2 395 27.8
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 7.8e-23 112.5 397 30.7
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.0e-22 112.1 381 29.9
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.3e-22 111.7 402 30.3
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.7e-22 111.3 384 28.4
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.0e-22 110.5 399 30.3
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 5.1e-22 109.8 392 30.9
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.1e-21 108.6 394 30.2
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.5e-21 107.5 399 30.1
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 2.5e-21 107.5 382 29.6
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.3e-21 107.1 184 44.0
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 5.6e-21 106.3 412 27.7
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.6e-20 104.8 411 29.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 2.1e-20 104.4 395 26.8
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.1e-19 102.1 397 28.0
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.1e-19 102.1 203 36.5
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.4e-19 101.7 404 28.2
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-19 101.3 400 29.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.0e-19 100.1 208 34.6
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 5.3e-19 99.8 391 27.6
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 6.9e-19 99.4 399 30.1
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.2e-18 98.6 395 28.9
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 7.6e-18 95.9 392 28.6
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 7.6e-18 95.9 392 28.6
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.2e-17 94.4 209 35.9
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 4.9e-17 93.2 399 24.6
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.1e-16 92.0 402 29.4
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.4e-16 91.7 397 28.5
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.4e-16 90.9 240 34.6
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 5.4e-16 89.7 393 27.5
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.7e-15 87.4 390 26.7
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.0e-14 85.5 404 28.5
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-14 85.1 329 29.5
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.1e-13 82.0 395 25.8
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.3e-13 80.5 133 40.6
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 5.6e-13 79.7 112 42.0
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 7.4e-13 79.3 309 27.2
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.7e-12 77.0 405 26.7
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 4.8e-12 76.6 407 26.8
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 6.2e-12 76.3 396 24.2
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.4e-11 75.1 262 27.5
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.2e-10 72.0 392 26.3
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 2.0e-10 71.2 152 39.5
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 1.3e-09 68.6 395 25.6
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 2.2e-09 67.8 354 27.7
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.2e-09 67.8 106 34.9
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.9e-08 64.7 114 34.2
HPP92_019577 Vanilla planifolia HOM05D025517 ORTHO05D019338 3.2e-08 63.9 405 26.2
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 4.2e-08 63.5 418 25.6
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 5.5e-08 63.2 395 25.6
Ah.00g238010 Amaranthus hybridus HOM05D024306 ORTHO05D012960 2.1e-07 61.2 407 24.8
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 2.1e-07 61.2 159 28.3
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 3.0e-06 57.4 150 34.7


User provided reference genes

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