Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.4e-86 321.6 160 100.0
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.3e-69 266.5 138 96.4
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.6e-32 143.3 141 56.0
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.5e-30 136.7 140 55.7
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 6.4e-29 131.3 163 52.8
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 7.1e-28 127.9 155 50.3
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.6e-27 126.7 162 48.1
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 4.6e-27 125.2 156 48.1
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 1.0e-26 124.0 157 47.1
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 8.7e-26 120.9 157 46.5
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 8.7e-26 120.9 136 44.9
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.1e-25 120.6 158 46.2
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 2.5e-25 119.4 154 48.7
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 5.6e-25 118.2 152 48.0
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 1.3e-24 117.1 133 51.9
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.6e-24 116.7 157 45.9
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 2.1e-24 116.3 158 48.7
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 2.8e-24 115.9 154 47.4
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.7e-24 115.5 157 45.9
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 8.1e-24 114.4 149 44.3
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.4e-23 113.6 151 51.7
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 1.8e-23 113.2 145 49.0
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 3.1e-23 112.5 161 46.6
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 4.0e-23 112.1 149 47.7
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 6.9e-23 111.3 157 42.7
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.5e-22 110.2 149 48.3
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.5e-22 110.2 142 49.3
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 1.5e-22 110.2 159 45.3
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 2.0e-22 109.8 162 40.1
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.6e-22 109.4 154 48.1
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.4e-22 109.0 116 50.9
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 5.8e-22 108.2 160 43.8
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 5.8e-22 108.2 151 49.7
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 7.6e-22 107.8 118 51.7
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 9.9e-22 107.5 147 44.9
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 3.8e-21 105.5 132 46.2
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.9e-21 105.1 146 46.6
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 8.4e-21 104.4 110 51.8
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 8.4e-21 104.4 149 45.0
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 8.4e-21 104.4 147 44.2
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.1e-20 104.0 139 48.2
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 7.1e-20 101.3 153 40.5
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 7.1e-20 101.3 164 42.7
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 1.6e-19 100.1 177 43.5
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 2.1e-19 99.8 186 38.2
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 2.1e-19 99.8 157 42.0
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.5e-19 99.0 160 46.9
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 3.5e-19 99.0 156 41.7
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 6.0e-19 98.2 164 42.7
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 1.8e-18 96.7 148 45.9
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 2.3e-18 96.3 134 44.0
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 2.3e-18 96.3 142 44.4
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 3.9e-18 95.5 146 44.5
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.9e-18 95.5 152 44.7
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 8.7e-18 94.4 155 39.4
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 1.5e-17 93.6 149 42.3
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 1.9e-17 93.2 160 46.9
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 3.3e-17 92.4 161 40.4
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 1.3e-16 90.5 177 39.5
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.1e-16 89.7 152 42.8
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.8e-16 89.4 164 44.5
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 6.2e-16 88.2 155 41.9
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 6.2e-16 88.2 148 40.5
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 6.2e-16 88.2 171 36.8
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 8.2e-16 87.8 142 41.5
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 8.2e-16 87.8 154 40.3
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 8.2e-16 87.8 160 42.5
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 8.2e-16 87.8 165 44.2
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 8.2e-16 87.8 160 40.0
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 1.1e-15 87.4 179 39.1
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-15 87.4 162 35.2
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 1.4e-15 87.0 106 48.1
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 1.4e-15 87.0 163 39.3
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 2.4e-15 86.3 153 35.9
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.4e-15 86.3 179 38.5
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 2.4e-15 86.3 149 38.3
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 5.3e-15 85.1 142 40.1
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 6.9e-15 84.7 158 38.6
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 9.0e-15 84.3 177 36.2
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 9.0e-15 84.3 160 38.8
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 9.0e-15 84.3 150 42.0
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.2e-14 84.0 182 34.6
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-14 84.0 149 40.9
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-14 83.6 154 46.1
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.5e-14 83.6 154 46.1
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.0e-14 83.2 164 35.4
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.0e-14 83.2 177 36.2
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.5e-14 82.0 154 45.5
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 4.5e-14 82.0 162 38.9
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 5.8e-14 81.6 154 36.4
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 5.8e-14 81.6 145 39.3
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 5.8e-14 81.6 141 36.2
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 5.8e-14 81.6 153 39.9
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 1.0e-13 80.9 148 37.8
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 1.3e-13 80.5 145 37.2
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.3e-13 80.5 150 38.7
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 1.7e-13 80.1 100 50.0
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 2.2e-13 79.7 154 41.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 3.8e-13 79.0 155 39.4
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 3.8e-13 79.0 153 35.3
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 6.5e-13 78.2 157 41.4
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.5e-13 78.2 152 37.5
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.4e-12 77.0 146 38.4
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.9e-12 76.6 157 34.4
FAN15G0380 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.5e-12 76.3 180 36.1
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 2.5e-12 76.3 153 37.9
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 3.2e-12 75.9 149 37.6
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 4.2e-12 75.5 145 37.9
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 7.1e-12 74.7 153 35.3
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.6e-11 73.6 141 40.4
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.1e-11 73.2 177 35.0
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 3.5e-11 72.4 141 36.2
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 4.6e-11 72.0 161 37.3
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 6.1e-11 71.6 165 33.3
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 6.1e-11 71.6 146 37.0
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 7.9e-11 71.2 142 36.6
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.0e-10 70.9 136 36.8
FAN20G0770 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.3e-10 69.7 164 35.4
Potri.014G012900 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.3e-10 69.7 154 33.8
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 3.0e-10 69.3 140 35.0
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.0e-10 69.3 136 36.0
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 3.9e-10 68.9 131 38.2
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 5.1e-10 68.6 164 31.7
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 5.1e-10 68.6 93 37.6
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.7e-10 68.2 134 35.1
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.7e-10 68.2 136 39.0
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 3.3e-09 65.9 138 38.4
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.4e-09 64.7 136 38.2
Sc02g0008110 Simmondsia chinensis HOM05D005317 ORTHO05D005146 9.7e-09 64.3 148 32.4
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 1.3e-08 63.9 97 40.2
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 1.3e-08 63.9 97 40.2
HPP92_026659 Vanilla planifolia HOM05D066124 ORTHO05D051582 1.3e-08 63.9 141 33.3
PGSC0003DMG400021404 Solanum tuberosum HOM05D061607 ORTHO05D005146 1.6e-08 63.5 148 35.8
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 2.8e-08 62.8 135 36.3
CsaV3_6G044310 Cucumis sativus L. HOM05D005317 ORTHO05D005146 2.8e-08 62.8 142 36.6
Glyma.06G048800 Glycine max HOM05D014755 ORTHO05D005146 2.8e-08 62.8 130 34.6
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea HOM05D005317 ORTHO05D005146 4.8e-08 62.0 188 31.9
CARHR010290 Cardamine hirsuta HOM05D011270 ORTHO05D012905 6.3e-08 61.6 93 36.6
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea HOM05D005317 ORTHO05D005146 8.2e-08 61.2 107 42.1
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 8.2e-08 61.2 141 31.9
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 1.1e-07 60.8 117 35.0
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 1.1e-07 60.8 117 35.0
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 1.1e-07 60.8 97 37.1
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 1.1e-07 60.8 122 34.4
FAN24G2816 Fragaria x ananassa HOM05D030376 ORTHO05D005146 1.8e-07 60.1 106 36.8
Gohir.A11G212400 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.8e-07 60.1 156 34.6
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 3.1e-07 59.3 157 32.5
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 4.1e-07 58.9 141 31.2
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 5.3e-07 58.5 94 38.3
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 5.3e-07 58.5 94 38.3
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 6.9e-07 58.2 94 38.3
C05p08330 Brassica napus HOM05D011270 ORTHO05D012905 6.9e-07 58.2 94 38.3
BolC5t29583H Brassica oleracea HOM05D011270 ORTHO05D012905 6.9e-07 58.2 94 38.3
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 6.9e-07 58.2 151 31.1
HPP92_015703 Vanilla planifolia HOM05D066124 ORTHO05D051582 6.9e-07 58.2 136 31.6
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 9.0e-07 57.8 94 37.2
ClCG05G026550 Citrullus lanatus HOM05D029900 ORTHO05D005146 9.0e-07 57.8 141 34.0
RcHm_v2.0_Chr6g0310031 Rosa chinensis HOM05D025097 ORTHO05D025563 9.0e-07 57.8 174 31.6
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.2e-06 57.4 135 31.1
Glyma.17G232800 Glycine max HOM05D014755 ORTHO05D005146 1.2e-06 57.4 132 34.8
Gohir.D05G215433 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-06 57.0 137 33.6
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 1.5e-06 57.0 93 35.5
Glyma.14G089087 Glycine max HOM05D014755 ORTHO05D005146 2.0e-06 56.6 130 33.1
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 3.4e-06 55.8 129 34.1
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 3.4e-06 55.8 122 34.4
ECA246G5098 Erigeron canadensis HOM05D005317 ORTHO05D005146 4.5e-06 55.5 147 31.3
Carub.0001s0960 Capsella rubella HOM05D011270 ORTHO05D012905 5.9e-06 55.1 156 28.8
Gohir.D01G111366 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.9e-06 55.1 81 46.9
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.0e-05 54.3 145 30.3
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.0e-05 54.3 142 29.6


User provided reference genes

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