Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 5.7e-68 260.8 129 100.0
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 8.8e-53 210.3 119 86.6
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.0e-52 209.1 129 79.1
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 5.7e-52 207.6 129 78.3
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 5.7e-52 207.6 129 78.3
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 7.4e-52 207.2 129 79.1
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 9.7e-52 206.8 129 79.8
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 2.2e-51 205.7 129 78.3
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 3.7e-51 204.9 129 77.5
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 4.8e-51 204.5 129 77.5
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 6.3e-51 204.1 129 78.3
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 6.3e-51 204.1 129 77.5
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 8.2e-51 203.8 129 77.5
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 1.8e-50 202.6 129 76.7
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 3.1e-50 201.8 129 76.7
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 4.1e-50 201.4 129 75.2
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 4.1e-50 201.4 129 76.7
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 5.3e-50 201.1 129 75.2
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 5.3e-50 201.1 129 76.7
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 5.3e-50 201.1 129 76.0
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 7.0e-50 200.7 129 76.7
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 9.1e-50 200.3 129 76.0
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 1.2e-49 199.9 129 75.2
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 2.0e-49 199.1 129 76.0
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 3.5e-49 198.4 129 72.9
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 1.3e-48 196.4 129 74.4
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 1.7e-48 196.1 127 74.8
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 2.2e-48 195.7 129 74.4
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 2.9e-48 195.3 129 73.6
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 2.9e-48 195.3 119 78.2
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 2.9e-48 195.3 129 74.4
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 3.8e-48 194.9 128 73.4
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 5.0e-48 194.5 119 79.0
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 6.5e-48 194.1 124 75.0
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 6.5e-48 194.1 129 73.6
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 6.5e-48 194.1 129 73.6
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 6.5e-48 194.1 129 73.6
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 8.5e-48 193.7 127 73.2
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 1.1e-47 193.4 127 74.0
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 1.5e-47 193.0 128 74.2
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.5e-47 193.0 129 73.6
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 1.9e-47 192.6 122 75.4
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.9e-47 192.6 121 76.9
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.9e-47 192.6 129 72.9
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 1.9e-47 192.6 120 77.5
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 2.5e-47 192.2 129 74.4
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 3.2e-47 191.8 129 72.9
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 4.2e-47 191.4 129 74.4
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 5.5e-47 191.0 121 76.9
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 5.5e-47 191.0 128 71.9
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 7.2e-47 190.7 129 72.9
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 7.2e-47 190.7 129 73.6
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 7.2e-47 190.7 116 77.6
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 9.4e-47 190.3 129 73.6
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 1.6e-46 189.5 129 71.3
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 2.1e-46 189.1 119 78.2
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 2.1e-46 189.1 119 77.3
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 2.1e-46 189.1 129 72.1
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 3.6e-46 188.3 129 71.3
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 3.6e-46 188.3 129 71.3
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 4.7e-46 188.0 127 71.7
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 6.1e-46 187.6 129 69.0
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 6.1e-46 187.6 129 69.0
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 6.1e-46 187.6 129 69.0
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 6.1e-46 187.6 129 69.0
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 8.0e-46 187.2 127 72.4
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 8.0e-46 187.2 127 69.3
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 1.4e-45 186.4 121 76.9
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 2.3e-45 185.7 119 75.6
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 3.0e-45 185.3 129 71.3
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 4.0e-45 184.9 115 76.5
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 4.0e-45 184.9 127 72.4
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 4.0e-45 184.9 127 67.7
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 5.2e-45 184.5 119 74.8
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 6.7e-45 184.1 127 67.7
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 6.7e-45 184.1 129 69.8
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 6.7e-45 184.1 129 69.0
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 8.8e-45 183.7 127 69.3
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 1.5e-44 183.0 119 73.1
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 2.0e-44 182.6 115 75.7
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 2.0e-44 182.6 130 69.2
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 2.6e-44 182.2 129 67.4
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 2.6e-44 182.2 129 68.2
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 3.3e-44 181.8 127 67.7
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 4.4e-44 181.4 121 73.6
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 5.7e-44 181.0 128 65.6
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 5.7e-44 181.0 119 74.8
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 5.7e-44 181.0 119 73.9
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 7.5e-44 180.6 115 74.8
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 9.7e-44 180.3 129 68.2
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 9.7e-44 180.3 115 74.8
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 1.3e-43 179.9 121 69.4
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 1.3e-43 179.9 121 69.4
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 1.7e-43 179.5 127 67.7
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 1.7e-43 179.5 129 67.4
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 2.2e-43 179.1 115 74.8
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 2.2e-43 179.1 129 67.4
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 2.8e-43 178.7 129 68.2
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 2.8e-43 178.7 128 68.8
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 4.8e-43 177.9 127 66.9
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 8.2e-43 177.2 129 66.7
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.8e-42 176.0 119 68.1
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.8e-42 176.0 119 68.1
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 2.4e-42 175.6 116 69.8
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 4.1e-42 174.9 122 68.0
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 5.3e-42 174.5 127 69.3
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 5.3e-42 174.5 122 69.7
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 7.0e-42 174.1 115 72.2
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 1.0e-40 170.2 111 71.2
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 1.7e-40 169.5 119 68.9
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 6.5e-40 167.5 116 69.0
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.2e-39 165.2 121 68.6
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 5.5e-39 164.5 122 67.2
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 5.5e-39 164.5 124 64.5
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.6e-38 161.8 122 68.0
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 1.4e-37 159.8 116 69.0
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 1.8e-37 159.5 107 72.0
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 4.8e-35 151.4 129 59.7
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 1.6e-33 146.4 107 64.5
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 3.5e-33 145.2 129 57.4
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 5.9e-33 144.4 105 64.8
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 2.5e-31 139.0 93 68.8
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 4.7e-30 134.8 100 66.0
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 1.4e-29 133.3 114 54.4
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 3.0e-29 132.1 97 63.9
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 6.8e-29 131.0 96 64.6
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 2.0e-28 129.4 95 64.2
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 3.4e-28 128.6 143 47.6
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 5.7e-28 127.9 96 63.5
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 1.1e-26 123.6 113 52.2
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 1.4e-26 123.2 141 46.8
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 4.1e-26 121.7 92 67.4
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 1.6e-25 119.8 98 54.1
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 8.6e-24 114.0 87 63.2
arahy.Tifrunner.gnm1.ann1.3DP3ZG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.1e-13 80.5 51 74.5
CBR_g48744 Chara braunii HOM05D005344 ORTHO05D006444 1.6e-06 56.6 66 39.4
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 8.1e-06 54.3 39 61.5


User provided reference genes

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