Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02291 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 8.4e-151 537.0 263 100.0
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 4.9e-50 202.2 190 55.8
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 4.0e-44 182.6 164 56.7
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 1.7e-42 177.2 153 55.6
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 1.1e-41 174.5 155 55.5
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 9.2e-41 171.4 156 54.5
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 6.0e-40 168.7 155 52.3
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 3.0e-39 166.4 155 52.9
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 7.3e-38 161.8 156 50.6
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 9.5e-38 161.4 153 51.6
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 1.6e-37 160.6 157 53.5
Rhsim03G0237700 Rhododendron simsii HOM05D002350 ORTHO05D000091 1.6e-37 160.6 168 47.6
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 2.8e-37 159.8 154 51.3
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 4.7e-37 159.1 160 51.2
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 1.8e-36 157.1 156 50.6
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 6.8e-36 155.2 173 48.6
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 6.8e-36 155.2 152 52.0
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 8.9e-36 154.8 182 44.5
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 3.4e-35 152.9 167 50.9
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 3.4e-35 152.9 176 46.0
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 4.4e-35 152.5 195 43.6
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 3.8e-34 149.4 153 51.0
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 3.8e-34 149.4 168 50.6
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 8.4e-34 148.3 153 49.7
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-33 147.9 159 47.8
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.1e-33 147.9 153 49.7
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.1e-33 147.9 153 49.7
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 1.4e-33 147.5 156 48.7
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 1.9e-33 147.1 173 47.4
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 3.2e-33 146.4 189 42.9
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 4.1e-33 146.0 173 45.1
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 5.4e-33 145.6 158 48.7
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 9.2e-33 144.8 179 46.9
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 9.2e-33 144.8 155 48.4
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 2.1e-32 143.7 184 41.3
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 2.7e-32 143.3 154 48.1
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 2.7e-32 143.3 154 48.1
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 2.7e-32 143.3 169 45.0
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 4.6e-32 142.5 154 48.1
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 4.6e-32 142.5 154 43.5
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 6.0e-32 142.1 154 48.7
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 6.0e-32 142.1 154 48.1
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 6.0e-32 142.1 150 46.0
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 6.0e-32 142.1 184 41.3
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 7.8e-32 141.7 155 47.7
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 7.8e-32 141.7 157 47.1
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 7.8e-32 141.7 183 42.1
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 7.8e-32 141.7 167 42.5
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 3.0e-31 139.8 155 47.1
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 3.0e-31 139.8 154 48.1
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 3.9e-31 139.4 160 46.9
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 5.1e-31 139.0 152 46.7
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 6.6e-31 138.7 153 48.4
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 1.1e-30 137.9 155 47.1
RcHm_v2.0_Chr2g0091671 Rosa chinensis HOM05D002350 ORTHO05D000091 1.1e-30 137.9 154 44.8
A07p00750 Brassica napus HOM05D002350 ORTHO05D000091 2.5e-30 136.7 154 46.1
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 2.5e-30 136.7 154 44.8
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 3.3e-30 136.3 156 46.2
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 4.3e-30 136.0 155 46.5
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 7.3e-30 135.2 159 45.3
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 7.3e-30 135.2 155 46.5
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 7.3e-30 135.2 159 45.3
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 7.3e-30 135.2 194 41.8
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 9.6e-30 134.8 154 46.1
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 9.6e-30 134.8 155 46.5
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 9.6e-30 134.8 150 44.0
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 1.2e-29 134.4 185 40.0
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.2e-29 134.4 155 46.5
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 1.6e-29 134.0 153 44.4
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 2.8e-29 133.3 158 45.6
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 2.8e-29 133.3 152 46.7
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 2.8e-29 133.3 159 45.3
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 2.8e-29 133.3 154 46.8
SalBow5G3880 Salvia bowleyana HOM05D002350 ORTHO05D000091 3.6e-29 132.9 158 42.4
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 6.2e-29 132.1 152 46.7
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 6.2e-29 132.1 175 40.0
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 8.1e-29 131.7 155 46.5
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 8.1e-29 131.7 155 45.8
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 1.1e-28 131.3 155 45.2
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 1.4e-28 131.0 154 45.5
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 1.4e-28 131.0 155 43.2
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 2.4e-28 130.2 154 44.8
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 3.1e-28 129.8 155 41.3
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 3.1e-28 129.8 155 41.3
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 3.1e-28 129.8 152 43.4
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 4.0e-28 129.4 156 42.9
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 4.0e-28 129.4 153 44.4
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 6.9e-28 128.6 155 43.2
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 9.0e-28 128.3 154 44.8
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 9.0e-28 128.3 170 41.8
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 9.0e-28 128.3 163 42.3
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 2.0e-27 127.1 155 44.5
Os01g0198100 Oryza sativa ssp. japonica HOM05D002350 ORTHO05D000091 2.0e-27 127.1 172 40.7
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 2.0e-27 127.1 154 43.5
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 2.6e-27 126.7 158 42.4
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 2.6e-27 126.7 134 47.0
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.4e-27 126.3 155 45.2
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 4.4e-27 125.9 156 41.7
Migut.N01382 Erythranthe guttata HOM05D002350 ORTHO05D000091 4.4e-27 125.9 155 44.5
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 5.8e-27 125.6 170 41.2
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 7.6e-27 125.2 154 44.2
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 7.6e-27 125.2 229 32.8
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 9.9e-27 124.8 155 42.6
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 1.3e-26 124.4 155 43.9
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 1.7e-26 124.0 155 41.9
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 2.2e-26 123.6 153 46.4
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 2.9e-26 123.2 153 41.8
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 2.9e-26 123.2 165 40.6
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 2.9e-26 123.2 152 43.4
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 2.9e-26 123.2 155 42.6
BolC8t51797H Brassica oleracea HOM05D002350 ORTHO05D000091 3.8e-26 122.9 162 43.8
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 3.8e-26 122.9 206 39.3
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 6.4e-26 122.1 178 37.6
Sopen06g017060 Solanum pennellii HOM05D002350 ORTHO05D000091 1.1e-25 121.3 200 38.0
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.4e-25 120.9 153 42.5
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.9e-25 120.6 124 47.6
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 1.9e-25 120.6 152 41.4
Zm00001eb088530 Zea mays HOM05D054927 ORTHO05D000091 2.4e-25 120.2 172 39.0
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 5.4e-25 119.0 157 41.4
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 5.4e-25 119.0 155 42.6
HanXRQChr16g0503801 Helianthus annuus HOM05D002350 ORTHO05D000091 7.1e-25 118.6 152 42.1
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 7.1e-25 118.6 182 37.4
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 9.3e-25 118.2 156 42.9
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 1.2e-24 117.9 154 41.6
Nitab4.5_0000165g0040 Nicotiana tabacum HOM05D002350 ORTHO05D000091 1.2e-24 117.9 155 42.6
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 2.7e-24 116.7 112 46.4
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 4.6e-24 115.9 206 35.0
Nitab4.5_0001354g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 4.6e-24 115.9 194 36.6
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 6.0e-24 115.5 152 45.4
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 1.0e-23 114.8 168 42.9
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 2.3e-23 113.6 153 42.5
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 3.9e-23 112.8 159 36.5
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 5.1e-23 112.5 153 39.9
Oeu064188.1 Olea europaea HOM05D002350 ORTHO05D000091 5.1e-23 112.5 156 41.0
Peaxi162Scf00824g00114 Petunia axillaris HOM05D002350 ORTHO05D000091 5.1e-23 112.5 162 37.7
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 2.5e-22 110.2 137 43.8
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 2.8e-21 106.7 156 37.8
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 1.1e-20 104.8 133 39.1
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 4.0e-20 102.8 184 33.7
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 4.0e-20 102.8 202 33.7
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 6.9e-20 102.1 205 31.7
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 9.0e-20 101.7 153 41.2
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.5e-19 100.9 158 36.7
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 5.8e-19 99.0 155 35.5
A01p21050 Brassica napus HOM05D002350 ORTHO05D000091 1.4e-17 94.4 170 38.8
BraA09t40056Z Brassica rapa HOM05D002350 ORTHO05D000091 1.4e-17 94.4 170 38.8
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 4.2e-17 92.8 174 35.1
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 9.3e-17 91.7 116 38.8
SEGI_26853 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 3.5e-16 89.7 162 36.4
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 3.0e-15 86.7 168 35.7
Sabra06G0125300 Salix brachista HOM05D002350 ORTHO05D000091 3.0e-15 86.7 81 45.7
MD15G1195300 Malus domestica HOM05D002350 ORTHO05D000091 3.9e-15 86.3 89 47.2
AUR62021425 Chenopodium quinoa HOM05D002350 ORTHO05D000091 5.1e-15 85.9 119 36.1
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 6.7e-15 85.5 150 34.0
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 1.5e-14 84.3 153 36.6
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 3.3e-14 83.2 163 33.1
CAN.G160.39 Capsicum annuum HOM05D002350 ORTHO05D000091 4.8e-13 79.3 92 43.5
MBI04_g40931_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 6.9e-12 75.5 92 44.6
MBI04_g17292_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 1.5e-11 74.3 67 52.2
A07p00720 Brassica napus HOM05D002350 ORTHO05D000091 2.0e-11 73.9 91 44.0
SEGI_17992 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 1.1e-09 68.2 95 41.1
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 7.1e-09 65.5 63 54.0
A10p27580 Brassica napus HOM05D002350 ORTHO05D000091 9.3e-09 65.1 121 38.0
Rhsim01G0145900 Rhododendron simsii HOM05D000449 ORTHO05D023102 2.7e-08 63.5 68 48.5
VMungo0720G0058 Vigna mungo HOM05D007130 ORTHO05D002078 1.8e-07 60.8 63 46.0
vmacro06243 Vaccinium macrocarpon HOM05D002350 ORTHO05D023102 2.3e-07 60.5 67 47.8
MBI04_g17297_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 3.0e-07 60.1 65 46.2
CDE05G2808 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 8.7e-07 58.5 61 45.9
CSS0028801 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 2.5e-06 57.0 55 49.1
RcHm_v2.0_Chr4g0418181 Rosa chinensis HOM05D002350 ORTHO05D000091 2.5e-06 57.0 61 49.2


User provided reference genes

Program Settings