Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.9e-117 426.0 246 100.0
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 6.2e-31 138.7 255 41.2
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.1e-27 127.9 255 38.8
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 3.5e-26 122.9 265 38.9
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.1e-24 117.9 268 37.3
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 1.6e-23 114.0 262 39.3
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 4.8e-23 112.5 296 36.1
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 6.2e-23 112.1 186 45.7
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 2.4e-22 110.2 254 37.4
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.5e-21 105.9 247 37.7
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.5e-21 105.9 264 41.3
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.3e-20 104.4 248 34.3
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.3e-20 104.4 279 35.1
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 1.3e-20 104.4 170 43.5
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 1.7e-20 104.0 175 45.1
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.2e-20 103.6 264 40.5
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.9e-20 103.2 232 38.4
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 4.9e-20 102.4 264 36.4
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 6.4e-20 102.1 254 44.5
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 8.4e-20 101.7 260 37.3
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 1.4e-19 100.9 179 46.4
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.9e-19 100.5 179 42.5
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.9e-19 100.5 154 48.1
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.9e-19 100.5 188 43.6
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.4e-19 100.1 176 43.8
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 3.2e-19 99.8 281 35.6
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.3e-19 98.2 275 37.8
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.6e-18 97.4 248 41.9
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.6e-18 97.4 170 40.0
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.6e-18 97.4 175 42.9
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.7e-18 96.7 266 35.7
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.5e-18 96.3 174 42.0
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 4.6e-18 95.9 286 37.8
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.6e-18 95.9 274 37.6
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 6.0e-18 95.5 255 34.1
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.0e-17 94.7 274 35.8
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.8e-17 94.0 274 35.0
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 5.1e-17 92.4 255 41.2
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.9e-16 90.5 192 41.1
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.3e-16 89.4 247 34.4
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 7.4e-16 88.6 181 40.3
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.6e-15 87.4 276 34.1
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 6.2e-15 85.5 283 32.5
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.1e-14 84.7 260 38.1
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.4e-14 84.3 226 33.6
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 2.4e-14 83.6 276 32.6
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 3.1e-14 83.2 176 35.2
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 3.1e-14 83.2 247 31.2
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 9.0e-14 81.6 247 34.4
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.5e-13 80.9 193 38.9
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.5e-13 80.9 265 33.2
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 4.5e-13 79.3 168 36.3
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 4.5e-13 79.3 181 43.1
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 5.8e-13 79.0 249 32.1
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 9.9e-13 78.2 169 39.6
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 9.9e-13 78.2 120 43.3
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 2.9e-12 76.6 169 38.5
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.8e-12 76.3 193 38.9
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.8e-12 76.3 193 38.9
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 4.9e-12 75.9 248 32.7
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 6.4e-12 75.5 149 37.6
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 2.4e-11 73.6 248 31.5
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 3.2e-11 73.2 246 30.1
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 1.2e-10 71.2 171 38.6
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 3.5e-10 69.7 170 38.2
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 4.6e-10 69.3 168 35.1
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 6.0e-10 68.9 247 32.0
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 7.9e-10 68.6 144 39.6
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.3e-09 67.8 247 32.0
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 1.3e-09 67.8 235 31.9
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 1.8e-09 67.4 176 35.2
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.3e-09 67.0 57 64.9
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 3.9e-09 66.2 128 39.8
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 3.9e-09 66.2 170 36.5
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.1e-09 65.9 247 32.4
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 8.7e-09 65.1 165 37.0
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.1e-08 64.7 121 38.0
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.9e-08 63.9 60 58.3
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 1.9e-08 63.9 226 31.4
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 2.5e-08 63.5 54 61.1
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 4.3e-08 62.8 98 41.8
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 9.6e-08 61.6 54 61.1
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 1.6e-07 60.8 144 34.7
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 1.6e-07 60.8 175 33.7
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.1e-07 60.5 54 59.3
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.1e-07 60.5 136 36.8
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 2.8e-07 60.1 102 36.3
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 3.7e-07 59.7 51 60.8
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 4.8e-07 59.3 54 59.3
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 4.8e-07 59.3 54 59.3
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 4.8e-07 59.3 54 59.3
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 4.8e-07 59.3 54 59.3
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 4.8e-07 59.3 54 59.3
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 1.4e-06 57.8 121 38.0
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.8e-06 57.4 177 31.1
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 1.8e-06 57.4 54 57.4
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 1.8e-06 57.4 54 57.4
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 3.1e-06 56.6 85 40.0
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 3.1e-06 56.6 85 40.0
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 6.9e-06 55.5 54 55.6


User provided reference genes

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