Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 6.4e-149 530.8 283 100.0
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.4e-26 124.4 331 33.8
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.2e-25 121.3 310 34.8
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 2.0e-25 120.6 313 35.5
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.3e-24 117.9 313 34.2
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 8.4e-24 115.2 333 36.6
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 9.3e-23 111.7 334 32.9
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 7.9e-22 108.6 341 34.6
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 8.7e-21 105.1 330 33.0
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 6.3e-19 99.0 339 31.0
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 8.2e-19 98.6 320 30.0
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 1.1e-18 98.2 340 35.3
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.1e-18 96.7 327 31.8
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 4.1e-18 96.3 316 30.4
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 5.3e-18 95.9 314 31.5
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 6.9e-18 95.5 350 33.1
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.4e-17 93.2 329 35.3
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 7.7e-17 92.0 322 31.7
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.3e-16 91.3 327 31.5
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 1.7e-16 90.9 335 34.9
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 2.2e-16 90.5 389 30.8
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 2.9e-16 90.1 327 30.9
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.9e-16 90.1 329 33.1
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 2.9e-16 90.1 288 36.8
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 6.5e-16 89.0 365 31.8
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 6.5e-16 89.0 333 33.6
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 1.1e-15 88.2 341 33.7
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 2.5e-15 87.0 332 28.9
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.5e-15 87.0 329 33.7
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 7.2e-15 85.5 325 31.7
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 7.2e-15 85.5 322 32.0
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 1.6e-14 84.3 354 32.8
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 2.7e-14 83.6 367 29.7
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.7e-14 83.6 329 33.7
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 6.1e-14 82.4 309 29.8
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.8e-13 80.9 288 25.0
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.8e-13 80.9 330 33.0
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 1.8e-13 80.9 331 31.7
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 2.3e-13 80.5 324 30.9
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 3.9e-13 79.7 310 30.6
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 6.7e-13 79.0 318 29.6
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 8.8e-13 78.6 258 29.8
Haze_02143 Corylus avellana HOM05D015147 ORTHO05D003197 1.1e-12 78.2 312 32.4
Potri.009G134800 Populus trichocarpa HOM05D015147 ORTHO05D003197 1.1e-12 78.2 325 29.2
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 1.1e-12 78.2 333 30.6
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 2.0e-12 77.4 319 30.1
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 2.0e-12 77.4 288 29.9
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.5e-12 77.0 329 27.1
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 2.5e-12 77.0 211 32.2
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 2.5e-12 77.0 313 28.1
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.3e-12 76.6 308 30.8
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 3.3e-12 76.6 345 31.9
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.3e-12 76.3 311 27.3
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 5.7e-12 75.9 310 30.3
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.7e-12 75.9 304 31.9
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 5.7e-12 75.9 305 32.5
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 5.7e-12 75.9 334 29.9
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 9.7e-12 75.1 357 31.4
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 9.7e-12 75.1 262 28.2
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.3e-11 74.7 310 29.7
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.3e-11 74.7 357 31.7
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 1.3e-11 74.7 388 29.9
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.7e-11 74.3 285 25.3
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.7e-11 74.3 218 30.3
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.2e-11 73.9 308 30.2
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 2.2e-11 73.9 234 29.5
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 2.8e-11 73.6 289 31.1
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 3.7e-11 73.2 317 30.3
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 3.7e-11 73.2 329 32.2
GSVIVG01024025001 Vitis vinifera HOM05D004095 ORTHO05D003197 3.7e-11 73.2 318 28.3
Cfa005239 Carpinus fangiana HOM05D004095 ORTHO05D003197 6.3e-11 72.4 307 25.4
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 6.3e-11 72.4 346 29.5
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 8.2e-11 72.0 285 25.3
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 8.2e-11 72.0 223 30.0
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 8.2e-11 72.0 289 30.4
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 1.1e-10 71.6 387 26.4
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.4e-10 71.2 321 27.7
TAR625G0988 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.4e-10 71.2 176 30.7
FAN27G1813 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.8e-10 70.9 292 26.7
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.8e-10 70.9 346 28.9
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 2.4e-10 70.5 353 28.0
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 5.3e-10 69.3 317 28.4
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 1.5e-09 67.8 313 24.6
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 2.0e-09 67.4 236 27.1
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 2.6e-09 67.0 111 32.4
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.6e-09 67.0 322 33.2
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 2.6e-09 67.0 315 34.0
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 2.6e-09 67.0 328 29.6
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 4.5e-09 66.2 339 30.4
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 5.9e-09 65.9 315 27.6
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 3.8e-08 63.2 376 28.2
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 1.1e-07 61.6 366 30.1
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 1.1e-07 61.6 314 26.1
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 1.4e-07 61.2 328 25.0
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 1.9e-07 60.8 338 32.2
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 2.5e-07 60.5 254 26.4
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 3.2e-07 60.1 81 35.8
Lj1g0024400 Lotus japonicus HOM05D004095 ORTHO05D003197 4.2e-07 59.7 287 28.2
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 5.5e-07 59.3 336 30.7
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 9.4e-07 58.5 263 29.7
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 1.2e-06 58.2 206 26.2
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.2e-06 58.2 222 30.2
unitig_0.g2088 Utricularia gibba HOM05D004095 ORTHO05D003197 1.2e-06 58.2 82 39.0
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.6e-06 57.8 138 42.8
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.6e-06 57.8 145 46.9
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 1.6e-06 57.8 135 45.9
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 1.6e-06 57.8 66 37.9
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 2.1e-06 57.4 128 32.0
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.1e-06 57.4 299 25.4
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 2.7e-06 57.0 325 32.6
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 2.7e-06 57.0 137 32.1
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 2.7e-06 57.0 231 26.0
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 3.6e-06 56.6 307 29.6
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 3.6e-06 56.6 326 25.2
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 3.6e-06 56.6 345 29.3
Medtr1g034990 Medicago truncatula HOM05D013708 ORTHO05D003197 6.1e-06 55.8 314 32.2
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 6.1e-06 55.8 71 40.8
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 7.9e-06 55.5 145 45.5


User provided reference genes

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