Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02126 Aquilegia oxysepala HOM05D003331 ORTHO05D003264 2.8e-115 418.7 222 100.0
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 9.9e-28 127.9 180 46.7
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 3.0e-24 116.3 200 44.0
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 5.1e-24 115.5 186 45.7
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 8.6e-24 114.8 224 41.5
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 2.8e-22 109.8 197 41.1
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 2.8e-22 109.8 196 44.4
Manes.02G109000 Manihot esculenta HOM05D003331 ORTHO05D003264 8.1e-22 108.2 198 41.9
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 2.4e-21 106.7 209 42.6
TAR628G1529 Trochodendron aralioides HOM05D003331 ORTHO05D003264 4.0e-21 105.9 189 45.0
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 8.9e-21 104.8 170 45.3
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 5.8e-20 102.1 188 40.4
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 9.9e-20 101.3 204 41.7
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 1.3e-19 100.9 180 43.3
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 2.2e-19 100.1 180 41.7
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 4.9e-19 99.0 187 40.6
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.1e-18 97.8 176 40.3
THA.LOC104807508 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 5.4e-18 95.5 178 40.4
Aa31LG6G12860 Aethionema arabicum HOM05D003331 ORTHO05D003264 9.3e-18 94.7 201 37.3
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 9.3e-18 94.7 184 43.5
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 9.3e-18 94.7 181 42.0
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 1.2e-17 94.4 188 38.8
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 2.7e-17 93.2 176 42.0
Sabra05G0188500 Salix brachista HOM05D003331 ORTHO05D003264 6.0e-17 92.0 241 37.3
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.0e-16 91.3 181 37.0
Haze_03715 Corylus avellana HOM05D003331 ORTHO05D003264 1.0e-16 91.3 179 40.8
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.3e-16 90.9 182 39.6
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 1.7e-16 90.5 192 40.6
A08p21610 Brassica napus HOM05D003331 ORTHO05D003264 3.0e-16 89.7 191 41.4
BraA08t34108Z Brassica rapa HOM05D003331 ORTHO05D003264 3.0e-16 89.7 191 41.4
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 3.9e-16 89.4 176 40.3
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.9e-16 89.4 186 38.7
QL02p012465 Quercus lobata HOM05D003331 ORTHO05D003264 3.9e-16 89.4 209 37.3
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 5.1e-16 89.0 180 39.4
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 8.7e-16 88.2 185 42.2
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 1.1e-15 87.8 186 41.9
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 1.1e-15 87.8 186 40.9
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 1.5e-15 87.4 186 41.4
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 1.5e-15 87.4 189 38.1
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 1.5e-15 87.4 187 39.0
MD15G1240800 Malus domestica HOM05D003331 ORTHO05D003264 2.5e-15 86.7 202 36.1
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 4.3e-15 85.9 185 41.6
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 4.3e-15 85.9 191 36.6
Cfa013989 Carpinus fangiana HOM05D003331 ORTHO05D003264 7.3e-15 85.1 201 37.3
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 9.6e-15 84.7 180 40.6
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 9.6e-15 84.7 180 40.6
BolC1t00299H Brassica oleracea HOM05D003331 ORTHO05D003264 9.6e-15 84.7 180 40.6
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 3.6e-14 82.8 200 36.0
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 4.8e-14 82.4 185 39.5
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 4.8e-14 82.4 154 37.7
A01p02810 Brassica napus HOM05D003331 ORTHO05D003264 8.1e-14 81.6 174 39.7
BraA01t00264Z Brassica rapa HOM05D003331 ORTHO05D003264 8.1e-14 81.6 174 39.7
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 8.1e-14 81.6 191 40.3
Psat2g152560 Pisum sativum HOM05D003331 ORTHO05D003264 8.1e-14 81.6 204 37.7
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.1e-13 81.3 159 39.6
Haze_22676 Corylus avellana HOM05D003331 ORTHO05D003264 1.4e-13 80.9 190 37.4
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 1.8e-13 80.5 187 37.4
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 3.1e-13 79.7 175 39.4
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 4.0e-13 79.3 187 38.5
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 5.3e-13 79.0 187 38.5
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 5.3e-13 79.0 180 38.9
Prupe.7G173300 Prunus persica HOM05D003331 ORTHO05D003264 5.3e-13 79.0 223 37.2
BcaNung04885 Brassica carinata HOM05D003331 ORTHO05D003264 6.9e-13 78.6 193 37.3
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 1.2e-12 77.8 223 36.8
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 1.5e-12 77.4 175 40.0
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.5e-12 77.4 174 40.2
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.0e-12 77.0 171 37.4
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.0e-12 77.0 177 38.4
Cc07_g11170 Coffea canephora HOM05D003331 ORTHO05D003264 2.6e-12 76.6 180 35.6
AT4G35900 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 3.4e-12 76.3 185 38.4
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 3.4e-12 76.3 204 35.8
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 3.4e-12 76.3 179 38.5
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 3.4e-12 76.3 195 36.9
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 3.4e-12 76.3 171 39.8
PSO541G2637 Papaver somniferum HOM05D003331 ORTHO05D003264 4.5e-12 75.9 272 35.7
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 5.8e-12 75.5 90 52.2
Phvul.002G105700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 5.8e-12 75.5 170 37.1
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 7.6e-12 75.1 222 38.3
BcaB07g31705 Brassica carinata HOM05D003331 ORTHO05D003264 1.3e-11 74.3 175 36.0
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 1.3e-11 74.3 177 38.4
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 1.3e-11 74.3 173 38.7
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.7e-11 73.9 184 37.5
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.7e-11 73.9 90 51.1
PSO675G4415 Papaver somniferum HOM05D003331 ORTHO05D003264 1.7e-11 73.9 273 35.9
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.2e-11 73.6 184 37.0
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 2.2e-11 73.6 174 37.4
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 2.2e-11 73.6 197 40.1
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 2.9e-11 73.2 176 39.8
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 3.8e-11 72.8 211 35.1
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 4.9e-11 72.4 179 35.8
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 4.9e-11 72.4 175 36.0
Actinidia17008 Actinidia chinensis HOM05D003331 ORTHO05D003264 8.4e-11 71.6 174 36.2
A03p63930 Brassica napus HOM05D003331 ORTHO05D003264 8.4e-11 71.6 182 37.9
BraA03t15462Z Brassica rapa HOM05D003331 ORTHO05D003264 8.4e-11 71.6 182 37.9
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 8.4e-11 71.6 184 37.5
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 8.4e-11 71.6 173 37.6
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 8.4e-11 71.6 175 38.3
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.1e-10 71.2 187 37.4
AT2G17770 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 1.9e-10 70.5 175 37.1
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 2.4e-10 70.1 181 35.4
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 2.4e-10 70.1 173 37.0
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 4.2e-10 69.3 200 36.0
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 7.1e-10 68.6 178 39.3
Eucgr.J02482 Eucalyptus grandis HOM05D003331 ORTHO05D003264 7.1e-10 68.6 185 37.8
Gohir.D01G096500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 9.3e-10 68.2 170 36.5
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 1.2e-09 67.8 170 34.7
Ciclev10003845m.g Citrus clementina HOM05D003331 ORTHO05D003264 1.2e-09 67.8 187 35.3
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 1.2e-09 67.8 176 36.4
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.2e-09 67.8 170 35.9
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-09 67.4 170 35.9
Gorai.009G269300 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-09 67.4 177 37.9
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 1.6e-09 67.4 180 37.8
Peaxi162Scf00328g00414 Petunia axillaris HOM05D003331 ORTHO05D003264 2.1e-09 67.0 185 36.8
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 4.6e-09 65.9 170 34.7
Atru.chr13.244 Acer truncatum HOM05D003331 ORTHO05D003264 6.0e-09 65.5 214 31.3
Cpa.g.sc26.287 Carica papaya HOM05D003331 ORTHO05D003264 6.0e-09 65.5 186 33.3
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 7.9e-09 65.1 172 34.9
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 7.9e-09 65.1 172 34.9
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 7.9e-09 65.1 172 34.9
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.3e-08 64.3 171 38.6
Rhsim10G0207400 Rhododendron simsii HOM05D003331 ORTHO05D003264 1.3e-08 64.3 179 36.3
CiPaw.08G068400 Carya illinoinensis HOM05D003331 ORTHO05D003264 2.3e-08 63.5 211 30.8
MELO3C013748.2 Cucumis melo HOM05D003331 ORTHO05D003264 3.0e-08 63.2 175 35.4
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 8.7e-08 61.6 171 36.8
A07p03180 Brassica napus HOM05D003331 ORTHO05D003264 1.1e-07 61.2 171 34.5
BraA07t28114Z Brassica rapa HOM05D003331 ORTHO05D003264 1.1e-07 61.2 171 34.5
Cpa.g.sc6.298 Carica papaya HOM05D003331 ORTHO05D003264 1.1e-07 61.2 151 37.1
BcaC06g36320 Brassica carinata HOM05D003331 ORTHO05D003264 1.5e-07 60.8 172 35.5
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 1.5e-07 60.8 220 32.3
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 1.5e-07 60.8 169 34.9
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 1.9e-07 60.5 190 35.8
Rhsim08G0031400 Rhododendron simsii HOM05D003331 ORTHO05D003264 2.5e-07 60.1 179 34.1
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 3.3e-07 59.7 175 37.1
C07p05420 Brassica napus HOM05D003331 ORTHO05D003264 4.3e-07 59.3 171 34.5
FAN19G3075 Fragaria x ananassa HOM05D003331 ORTHO05D003264 4.3e-07 59.3 223 31.4
Solyc02g061990.3 Solanum lycopersicum HOM05D003331 ORTHO05D003264 4.3e-07 59.3 174 33.9
BcaNung05055 Brassica carinata HOM05D003331 ORTHO05D003264 5.6e-07 58.9 176 33.5
FAN20G2542 Fragaria x ananassa HOM05D003331 ORTHO05D003264 5.6e-07 58.9 193 33.2
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 5.6e-07 58.9 185 33.5
TPR.G10558 Trifolium pratense HOM05D003331 ORTHO05D003264 5.6e-07 58.9 221 32.6
CsaV3_3G000600 Cucumis sativus L. HOM05D003331 ORTHO05D003264 9.6e-07 58.2 180 36.1
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 9.6e-07 58.2 213 31.5
FAN26G3159 Fragaria x ananassa HOM05D003331 ORTHO05D003264 9.6e-07 58.2 222 31.5
BolC7t40942H Brassica oleracea HOM05D003331 ORTHO05D003264 1.6e-06 57.4 171 33.9
Gohir.A05G256250 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.1e-06 57.0 170 35.3
Actinidia15450 Actinidia chinensis HOM05D003331 ORTHO05D003264 2.8e-06 56.6 47 68.1
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 2.8e-06 56.6 186 34.4
PGR083G0975 Punica granatum HOM05D003331 ORTHO05D003264 4.8e-06 55.8 182 33.0
SalBow3G1427 Salvia bowleyana HOM05D003331 ORTHO05D003264 4.8e-06 55.8 184 32.1


User provided reference genes

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