Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 8.8e-78 293.5 144 100.0
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 8.2e-76 287.0 142 96.5
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 4.1e-75 284.6 142 95.1
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 7.0e-75 283.9 142 94.4
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 7.0e-75 283.9 144 93.8
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 7.0e-75 283.9 144 93.8
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 9.1e-75 283.5 141 95.7
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 1.2e-74 283.1 142 94.4
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 1.2e-74 283.1 142 95.1
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 1.6e-74 282.7 142 94.4
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.6e-74 282.7 142 95.1
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.6e-74 282.7 142 95.1
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 1.6e-74 282.7 144 93.1
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 2.0e-74 282.3 142 95.8
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 3.5e-74 281.6 142 93.7
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 3.5e-74 281.6 142 94.4
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 4.5e-74 281.2 142 94.4
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 4.5e-74 281.2 142 93.7
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 5.9e-74 280.8 142 94.4
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 5.9e-74 280.8 142 93.0
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 5.9e-74 280.8 144 95.1
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 7.7e-74 280.4 142 93.7
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 7.7e-74 280.4 142 94.4
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 1.0e-73 280.0 142 93.7
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.0e-73 280.0 142 93.7
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.0e-73 280.0 142 94.4
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.0e-73 280.0 144 93.1
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 1.3e-73 279.6 142 92.3
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 1.3e-73 279.6 141 93.6
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 1.7e-73 279.3 142 93.7
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 2.9e-73 278.5 142 93.0
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 2.9e-73 278.5 142 93.7
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 2.9e-73 278.5 144 92.4
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 2.9e-73 278.5 144 91.0
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 2.9e-73 278.5 144 91.0
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 2.9e-73 278.5 144 91.0
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 2.9e-73 278.5 144 91.0
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 2.9e-73 278.5 141 93.6
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 2.9e-73 278.5 141 93.6
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 3.8e-73 278.1 142 93.0
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 3.8e-73 278.1 144 91.7
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 5.0e-73 277.7 142 92.3
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 5.0e-73 277.7 141 92.2
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 5.0e-73 277.7 141 93.6
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 6.5e-73 277.3 141 91.5
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 8.5e-73 276.9 140 92.9
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 1.1e-72 276.6 144 91.0
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 1.5e-72 276.2 142 91.5
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 1.5e-72 276.2 142 91.5
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 1.5e-72 276.2 142 91.5
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 1.9e-72 275.8 142 92.3
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 1.9e-72 275.8 142 91.5
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 92.9
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 3.2e-72 275.0 144 91.0
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 5.5e-72 274.2 142 91.5
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 5.5e-72 274.2 138 94.9
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 7.2e-72 273.9 141 90.1
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 7.2e-72 273.9 144 93.1
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 7.2e-72 273.9 141 90.1
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 7.2e-72 273.9 142 90.1
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 9.4e-72 273.5 142 90.8
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 9.4e-72 273.5 141 92.2
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 1.2e-71 273.1 141 89.4
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.2e-71 273.1 141 89.4
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 1.6e-71 272.7 141 92.2
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 1.6e-71 272.7 144 92.4
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 2.1e-71 272.3 142 90.1
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.7e-71 271.9 141 88.7
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 3.6e-71 271.6 142 90.8
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 4.7e-71 271.2 141 91.5
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 6.1e-71 270.8 141 88.7
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.0e-70 270.0 141 88.7
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.5e-69 266.2 165 80.0
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 1.5e-69 266.2 142 88.0
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 2.0e-69 265.8 142 90.1
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 2.6e-69 265.4 142 88.7
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 2.6e-69 265.4 152 86.2
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 2.6e-69 265.4 168 79.2
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 2.6e-69 265.4 144 86.8
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 9.8e-69 263.5 141 88.7
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 4.8e-68 261.2 140 87.9
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 8.3e-68 260.4 140 87.9
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 1.1e-67 260.0 140 88.6
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.4e-67 259.6 130 93.1
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.4e-67 259.6 140 86.4
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 1.8e-67 259.2 140 87.1
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.8e-67 259.2 140 86.4
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.8e-67 259.2 140 86.4
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 4.1e-67 258.1 140 86.4
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 4.1e-67 258.1 137 88.3
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.2e-66 256.5 140 86.4
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 2.7e-66 255.4 144 84.0
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 1.0e-65 253.4 140 84.3
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 1.7e-65 252.7 140 83.6
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.7e-65 252.7 138 84.8
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 3.8e-65 251.5 205 64.9
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 6.5e-65 250.8 140 83.6
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 6.5e-65 250.8 140 83.6
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 1.1e-64 250.0 206 64.6
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 85.0
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 82.1
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 85.0
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 82.1
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 85.0
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 2.5e-64 248.8 140 85.0
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 5.5e-64 247.7 140 83.6
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 2.8e-63 245.4 154 79.2
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 3.6e-63 245.0 168 72.6
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 3.6e-63 245.0 137 85.4
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 6.1e-63 244.2 138 82.6
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 5.7e-61 237.7 144 79.9
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 1.7e-60 236.1 129 87.6
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 5.4e-59 231.1 144 73.6
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 2.7e-58 228.8 140 77.9
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 9.5e-56 220.3 144 70.8
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 1.1e-51 206.8 138 65.2
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.1e-51 206.8 122 79.5
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.4e-51 206.5 114 86.0
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 4.1e-51 204.9 160 65.0
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 2.0e-50 202.6 133 68.4
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 3.9e-49 198.4 120 81.7
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 1.5e-48 196.4 97 96.9
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 9.5e-48 193.7 99 90.9
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 2.9e-44 182.2 120 76.7
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 4.3e-32 141.7 72 97.2
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.3e-28 130.2 71 88.7
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 1.3e-28 130.2 139 47.5
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 6.4e-28 127.9 72 84.7
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.1e-27 127.1 71 85.9
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 1.6e-26 123.2 140 49.3
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 3.9e-17 92.0 43 97.7
Cfa022471 Carpinus fangiana HOM05D000441 ORTHO05D124224 1.7e-12 76.6 161 32.9
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 1.7e-12 76.6 157 31.2
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 6.4e-12 74.7 53 66.0
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 1.4e-11 73.6 117 35.0
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 1.2e-10 70.5 44 75.0
Cre13.g571600 Chlamydomonas reinhardtii HOM05D004554 ORTHO05D005360 1.6e-07 60.1 133 29.3
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 2.1e-07 59.7 36 69.4
C03p66780 Brassica napus HOM05D046457 ORTHO05D032727 4.0e-06 55.5 83 38.6


User provided reference genes

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