Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 5.0e-134 481.1 242 100.0
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 1.3e-86 323.6 245 71.8
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 2.3e-86 322.8 245 71.8
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 5.6e-85 318.2 240 67.9
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 7.3e-85 317.8 244 68.4
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 1.8e-83 313.2 244 68.0
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 4.0e-83 312.0 244 68.9
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.2e-82 310.5 241 67.2
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 2.6e-82 309.3 244 66.4
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 3.4e-82 308.9 244 68.0
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 4.4e-82 308.5 244 66.4
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 5.8e-82 308.1 244 67.2
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 1.3e-81 307.0 244 66.0
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 1.3e-81 307.0 244 66.8
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 1.3e-81 307.0 248 66.5
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 4.9e-81 305.1 244 64.8
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 1.4e-80 303.5 244 66.8
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 1.9e-80 303.1 246 67.5
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 1.9e-80 303.1 245 66.9
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.9e-80 303.1 245 66.9
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.9e-80 303.1 245 66.9
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 2.4e-80 302.8 244 66.4
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 2.4e-80 302.8 252 64.3
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 4.2e-80 302.0 245 66.9
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 5.4e-80 301.6 245 66.5
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 5.4e-80 301.6 244 66.0
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 5.4e-80 301.6 218 69.3
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 7.1e-80 301.2 245 66.5
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 7.1e-80 301.2 244 66.4
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 7.1e-80 301.2 247 65.6
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 9.3e-80 300.8 244 65.6
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 1.2e-79 300.4 244 66.8
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 1.2e-79 300.4 244 66.4
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 2.1e-79 299.7 244 65.2
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 2.1e-79 299.7 244 67.6
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 4.6e-79 298.5 245 64.9
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 4.6e-79 298.5 241 67.2
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 6.0e-79 298.1 248 64.9
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 7.9e-79 297.7 247 66.4
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 7.9e-79 297.7 244 63.5
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 7.9e-79 297.7 243 63.8
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 1.3e-78 297.0 217 70.5
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 1.7e-78 296.6 243 63.8
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 2.3e-78 296.2 245 66.5
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 2.5e-77 292.7 243 66.3
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 3.3e-77 292.4 230 68.3
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 4.3e-77 292.0 247 65.2
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 5.6e-77 291.6 245 62.9
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 7.3e-77 291.2 248 62.9
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 1.3e-76 290.4 245 65.7
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 1.3e-76 290.4 243 64.2
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 1.3e-76 290.4 244 64.8
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.6e-76 290.0 219 67.6
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 2.8e-76 289.3 219 67.6
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 3.6e-76 288.9 245 64.9
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 4.8e-76 288.5 243 63.4
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 4.8e-76 288.5 255 61.2
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 8.1e-76 287.7 246 63.4
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 1.8e-75 286.6 243 63.0
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 2.4e-75 286.2 256 61.7
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 6.9e-75 284.6 247 62.3
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 1.2e-74 283.9 244 63.1
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 1.5e-74 283.5 243 63.8
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 2.0e-74 283.1 246 61.8
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 2.6e-74 282.7 246 63.8
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.6e-74 282.7 223 65.9
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 2.6e-74 282.7 216 66.7
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 3.4e-74 282.3 233 65.2
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 3.4e-74 282.3 239 62.8
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 3.4e-74 282.3 252 63.1
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 5.8e-74 281.6 245 62.4
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 7.6e-74 281.2 245 63.3
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 9.9e-74 280.8 246 62.6
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 9.9e-74 280.8 218 67.4
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 2.2e-73 279.6 245 62.4
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 2.2e-73 279.6 249 61.0
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 2.9e-73 279.3 248 62.9
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 2.9e-73 279.3 252 61.9
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 2.9e-73 279.3 246 64.2
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 4.9e-73 278.5 251 60.2
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 8.4e-73 277.7 250 60.8
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 1.4e-72 276.9 244 59.8
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 1.9e-72 276.6 246 62.2
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 3.2e-72 275.8 246 62.2
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 3.2e-72 275.8 248 62.1
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 3.2e-72 275.8 244 61.5
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 5.4e-72 275.0 243 60.1
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 7.1e-72 274.6 245 62.4
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 7.1e-72 274.6 253 61.7
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 7.1e-72 274.6 245 62.4
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 7.1e-72 274.6 200 70.5
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 7.1e-72 274.6 202 68.3
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 2.1e-71 273.1 250 61.6
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 6.0e-71 271.6 234 62.0
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 7.9e-71 271.2 243 60.9
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 1.3e-70 270.4 234 62.4
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 1.8e-70 270.0 244 62.7
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 3.0e-70 269.2 248 60.9
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 3.9e-70 268.9 248 61.3
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 5.1e-70 268.5 247 59.5
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 5.1e-70 268.5 189 73.5
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 8.7e-70 267.7 189 71.4
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 9.6e-69 264.2 249 59.4
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 1.3e-68 263.8 255 59.6
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 2.0e-66 256.5 193 68.4
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 5.8e-66 255.0 184 71.2
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 1.3e-65 253.8 197 68.0
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 4.9e-65 251.9 189 68.3
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 3.2e-64 249.2 221 60.2
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 4.6e-63 245.4 234 60.7
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 1.0e-62 244.2 237 55.3
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 6.7e-62 241.5 167 74.3
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 1.5e-61 240.4 158 74.1
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 5.7e-61 238.4 192 64.1
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 6.9e-59 231.5 195 62.6
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 6.7e-46 188.3 120 76.7
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 1.1e-45 187.6 121 73.6
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 1.4e-43 180.6 121 73.6
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 1.8e-43 180.3 111 75.7
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 4.5e-42 175.6 194 52.1
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.9e-41 172.9 181 51.4
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 4.2e-40 169.1 142 54.9
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 9.4e-40 167.9 162 56.8
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 7.4e-37 158.3 191 44.0
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.2e-34 151.0 242 38.0
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 2.0e-34 150.2 160 45.6
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 1.2e-31 141.0 173 45.1
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 5.2e-22 109.0 142 35.9
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 1.1e-19 101.3 68 69.1
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 4.2e-16 89.4 152 32.2
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 7.5e-13 78.6 103 46.6
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 2.2e-12 77.0 118 45.8
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 7.7e-10 68.6 148 29.1
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 2.3e-09 67.0 123 38.2


User provided reference genes

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