Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 1.3e-62 243.0 138 100.0
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 5.0e-30 134.8 140 52.9
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 5.0e-30 134.8 140 53.6
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 2.5e-29 132.5 126 58.7
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 2.1e-28 129.4 120 55.0
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 2.1e-28 129.4 136 52.9
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 3.6e-28 128.6 123 55.3
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 3.6e-28 128.6 134 52.2
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 4.7e-28 128.3 124 53.2
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 6.1e-28 127.9 126 53.2
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.4e-27 126.7 107 64.5
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.8e-27 126.3 105 61.0
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 2.3e-27 125.9 134 49.3
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 3.0e-27 125.6 103 64.1
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 4.0e-27 125.2 102 60.8
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 5.2e-27 124.8 97 70.1
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 6.8e-27 124.4 132 51.5
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 6.8e-27 124.4 132 51.5
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 6.8e-27 124.4 105 61.9
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 6.8e-27 124.4 120 54.2
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 8.9e-27 124.0 102 67.6
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 1.2e-26 123.6 117 57.3
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 1.2e-26 123.6 117 57.3
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 1.2e-26 123.6 126 54.8
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 2.0e-26 122.9 117 55.6
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.6e-26 122.5 118 57.6
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 5.7e-26 121.3 100 62.0
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 7.5e-26 120.9 97 62.9
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.7e-25 119.8 136 50.0
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 2.9e-25 119.0 137 45.3
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 3.7e-25 118.6 104 58.7
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 4.9e-25 118.2 123 53.7
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 8.3e-25 117.5 103 56.3
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.8e-24 116.3 97 58.8
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.8e-24 116.3 114 51.8
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 4.1e-24 115.2 129 51.9
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 5.4e-24 114.8 122 50.8
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 1.2e-23 113.6 113 52.2
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 2.7e-23 112.5 126 51.6
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 2.7e-23 112.5 131 49.6
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 3.5e-23 112.1 128 52.3
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 4.6e-23 111.7 138 46.4
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 5.9e-23 111.3 104 58.7
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.9e-23 111.3 102 53.9
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 7.8e-23 110.9 130 52.3
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 7.8e-23 110.9 137 43.8
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 7.8e-23 110.9 133 49.6
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.3e-22 110.2 132 43.9
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 1.7e-22 109.8 104 51.9
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 2.3e-22 109.4 114 50.0
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 2.3e-22 109.4 97 55.7
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.3e-22 109.4 101 56.4
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.9e-22 108.6 97 54.6
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.9e-22 108.6 97 54.6
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 3.9e-22 108.6 100 55.0
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 5.0e-22 108.2 135 44.4
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 6.6e-22 107.8 137 46.0
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 6.6e-22 107.8 135 45.2
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 8.6e-22 107.5 103 61.2
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 8.6e-22 107.5 132 47.0
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 8.6e-22 107.5 103 51.5
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 1.5e-21 106.7 137 46.0
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 1.5e-21 106.7 95 57.9
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 3.3e-21 105.5 122 47.5
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 3.3e-21 105.5 137 46.0
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 5.6e-21 104.8 125 46.4
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 5.6e-21 104.8 96 56.2
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 5.6e-21 104.8 97 55.7
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 7.3e-21 104.4 95 55.8
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 9.5e-21 104.0 136 44.1
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 9.5e-21 104.0 134 45.5
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 9.5e-21 104.0 134 45.5
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 9.5e-21 104.0 139 45.3
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 2.1e-20 102.8 133 46.6
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.1e-20 102.8 139 45.3
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 2.8e-20 102.4 102 50.0
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 3.6e-20 102.1 113 49.6
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 6.1e-20 101.3 134 44.8
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 6.1e-20 101.3 134 44.8
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 1.4e-19 100.1 135 45.9
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.4e-19 100.1 110 49.1
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 5.2e-19 98.2 141 44.0
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 1.2e-18 97.1 103 46.6
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 1.2e-18 97.1 110 50.0
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 1.2e-18 97.1 80 60.0
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 2.6e-18 95.9 95 52.6
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 9.8e-18 94.0 104 51.0
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.7e-17 93.2 97 48.5
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.1e-16 90.5 97 47.4
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 1.9e-16 89.7 81 59.3
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 1.3e-14 83.6 98 46.9
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 1.9e-13 79.7 67 64.2
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.6e-12 76.6 75 53.3
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 3.1e-11 72.4 55 69.1
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 4.0e-11 72.0 49 65.3
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 2.6e-10 69.3 89 44.9
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 1.9e-08 63.2 64 50.0
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 1.9e-08 63.2 64 50.0
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 4.1e-08 62.0 57 54.4
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.0e-06 55.8 105 28.6
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 3.9e-06 55.5 24 87.5
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 8.6e-06 54.3 57 50.9
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 8.6e-06 54.3 26 80.8


User provided reference genes

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