Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01979 Aquilegia oxysepala HOM05D003121 ORTHO05D003535 1.3e-106 389.8 206 100.0
PSO541G2003 Papaver somniferum HOM05D003121 ORTHO05D003535 8.0e-40 167.9 213 52.6
Nn5g27768 Nelumbo nucifera HOM05D003121 ORTHO05D003535 4.0e-39 165.6 206 52.9
Dinv41919 Davidia involucrata HOM05D003121 ORTHO05D003535 7.5e-38 161.4 210 52.4
TAR376G0768 Trochodendron aralioides HOM05D003121 ORTHO05D003535 7.5e-38 161.4 208 52.9
GSVIVG01037045001 Vitis vinifera HOM05D003121 ORTHO05D003535 8.3e-37 157.9 206 51.5
THA.LOC104819658 Tarenaya hassleriana HOM05D003121 ORTHO05D003535 2.4e-36 156.4 209 50.2
Actinidia39167 Actinidia chinensis HOM05D003121 ORTHO05D003535 3.1e-36 156.0 211 50.2
TAR625G0403 Trochodendron aralioides HOM05D003121 ORTHO05D003535 7.0e-36 154.8 212 50.9
PSO675G0341 Papaver somniferum HOM05D003121 ORTHO05D003535 1.6e-35 153.7 214 49.1
Duzib052G0361 Durio zibethinus HOM05D003121 ORTHO05D003535 2.0e-35 153.3 205 50.2
CARHR189980 Cardamine hirsuta HOM05D003121 ORTHO05D003535 2.7e-35 152.9 208 49.0
MSTRG.27630 Avicennia marina HOM05D003121 ORTHO05D003535 3.5e-35 152.5 210 49.0
CiPaw.02G071300 Carya illinoinensis HOM05D003121 ORTHO05D003535 3.5e-35 152.5 214 50.0
Rhsim01G0025300 Rhododendron simsii HOM05D003121 ORTHO05D003535 3.5e-35 152.5 203 50.2
Cc09_g10310 Coffea canephora HOM05D003121 ORTHO05D003535 4.5e-35 152.1 210 48.6
Carub.0006s2137 Capsella rubella HOM05D003121 ORTHO05D003535 5.9e-35 151.8 209 48.8
Migut.N01332 Erythranthe guttata HOM05D003121 ORTHO05D003535 5.9e-35 151.8 209 49.8
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 1.0e-34 151.0 209 47.8
SGA_v2.0_scaffold195G40810 Striga asiatica HOM05D003121 ORTHO05D003535 2.3e-34 149.8 211 48.8
CSS0021302 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 3.8e-34 149.1 210 47.1
CAN.G756.31 Capsicum annuum HOM05D003121 ORTHO05D003535 5.0e-34 148.7 213 46.0
Peaxi162Scf00793g00345 Petunia axillaris HOM05D003121 ORTHO05D003535 5.0e-34 148.7 210 47.6
Lsat_1_v5_gn_4_72000 Lactuca sativa HOM05D003121 ORTHO05D003535 1.5e-33 147.1 210 48.1
AT5G23590 Arabidopsis thaliana HOM05D003121 ORTHO05D003535 1.9e-33 146.7 208 46.2
vmacro13056 Vaccinium macrocarpon HOM05D003121 ORTHO05D003535 2.5e-33 146.4 204 47.1
AUR62013002 Chenopodium quinoa HOM05D003121 ORTHO05D003535 3.3e-33 146.0 205 49.8
Lalb_Chr06g0163731 Lupinus albus HOM05D003121 ORTHO05D003535 3.3e-33 146.0 189 52.4
Psat6g232680 Pisum sativum HOM05D003121 ORTHO05D003535 4.2e-33 145.6 207 49.3
Thecc.02G055800 Theobroma cacao HOM05D003121 ORTHO05D003535 4.2e-33 145.6 209 46.4
Thhalv10004704m.g Eutrema salsugineum HOM05D003121 ORTHO05D003535 5.5e-33 145.2 213 47.4
Aa31LG10G14410 Aethionema arabicum HOM05D003121 ORTHO05D003535 7.2e-33 144.8 210 47.6
EL10Ac9g21341 Beta vulgaris HOM05D003121 ORTHO05D003535 9.5e-33 144.4 208 48.1
A06p34540 Brassica napus HOM05D000059 ORTHO05D003535 9.5e-33 144.4 204 47.1
C07p43950 Brassica napus HOM05D003121 ORTHO05D003535 9.5e-33 144.4 212 45.8
QL11p052350 Quercus lobata HOM05D003121 ORTHO05D003535 9.5e-33 144.4 202 48.0
PGSC0003DMG401001724 Solanum tuberosum HOM05D003121 ORTHO05D003535 9.5e-33 144.4 214 46.3
HanXRQChr10g0298091 Helianthus annuus HOM05D003121 ORTHO05D003535 1.2e-32 144.1 208 47.6
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 1.2e-32 144.1 202 48.5
Sed0021457 Sechium edule HOM05D003121 ORTHO05D003535 2.1e-32 143.3 208 47.1
Ciclev10030221m.g Citrus clementina HOM05D003121 ORTHO05D003535 2.8e-32 142.9 199 48.7
Dinv40527 Davidia involucrata HOM05D003121 ORTHO05D003535 2.8e-32 142.9 201 48.8
MBI07_g07805_MAGBIO Magnolia biondii HOM05D003121 ORTHO05D003535 2.8e-32 142.9 199 47.2
AL6G34890 Arabidopsis lyrata HOM05D003121 ORTHO05D003535 3.6e-32 142.5 208 45.7
Sp2g23600 Schrenkiella parvula HOM05D003121 ORTHO05D003535 4.7e-32 142.1 212 46.2
Nitab4.5_0000563g0090 Nicotiana tabacum HOM05D003121 ORTHO05D003535 6.1e-32 141.7 208 48.6
Ca_03297_v3 Cicer arietinum L. HOM05D003121 ORTHO05D003535 8.0e-32 141.4 206 49.5
CsaV3_7G001220 Cucumis sativus L. HOM05D003121 ORTHO05D003535 1.0e-31 141.0 211 47.9
MD05G1124900 Malus domestica HOM05D003121 ORTHO05D003535 1.0e-31 141.0 208 48.1
Nitab4.5_0002341g0030 Nicotiana tabacum HOM05D003121 ORTHO05D003535 1.4e-31 140.6 210 46.7
Hund00013 Selenicereus undatus HOM05D003121 ORTHO05D003535 1.4e-31 140.6 201 47.3
BraA06t26383Z Brassica rapa HOM05D003121 ORTHO05D003535 1.8e-31 140.2 205 45.9
Haze_00809 Corylus avellana HOM05D003121 ORTHO05D003535 1.8e-31 140.2 201 47.8
AUR62010012 Chenopodium quinoa HOM05D003121 ORTHO05D003535 2.3e-31 139.8 202 50.0
Solyc01g088730.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 3.0e-31 139.4 214 44.9
CDE02G2638 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 4.0e-31 139.0 202 48.0
Gohir.A01G170400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 4.0e-31 139.0 207 46.9
Sopen01g035570 Solanum pennellii HOM05D003121 ORTHO05D003535 4.0e-31 139.0 214 44.9
BolC7t44923H Brassica oleracea HOM05D003121 ORTHO05D003535 1.2e-30 137.5 207 44.0
DCAR_022799 Daucus carota HOM05D003121 ORTHO05D003535 1.2e-30 137.5 201 49.8
ClCG02G003910 Citrullus lanatus HOM05D003121 ORTHO05D003535 1.5e-30 137.1 209 46.9
Gorai.002G200100 Gossypium raimondii HOM05D003121 ORTHO05D003535 1.5e-30 137.1 210 46.2
Prupe.8G168900 Prunus persica HOM05D003121 ORTHO05D003535 1.5e-30 137.1 210 47.6
arahy.Tifrunner.gnm1.ann1.TJ1SRC Arachis hypogaea HOM05D003121 ORTHO05D003535 2.0e-30 136.7 205 48.8
Ah.01g023230 Amaranthus hybridus HOM05D003121 ORTHO05D003535 2.6e-30 136.3 205 48.3
Gohir.D01G161400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 2.6e-30 136.3 210 46.2
Actinidia32029 Actinidia chinensis HOM05D003121 ORTHO05D003535 3.4e-30 136.0 209 47.8
BcaNung05203 Brassica carinata HOM05D003121 ORTHO05D003535 4.4e-30 135.6 215 45.6
Glyma.20G106400 Glycine max HOM05D003121 ORTHO05D003535 5.7e-30 135.2 202 50.5
EL10Ac6g13967 Beta vulgaris HOM05D003121 ORTHO05D003535 7.5e-30 134.8 201 45.3
DCAR_020880 Daucus carota HOM05D003121 ORTHO05D003535 7.5e-30 134.8 199 49.2
Medtr1g112910 Medicago truncatula HOM05D003121 ORTHO05D003535 9.8e-30 134.4 199 49.7
CiPaw.01G132000 Carya illinoinensis HOM05D003121 ORTHO05D003535 1.3e-29 134.0 211 48.3
AUR62015153 Chenopodium quinoa HOM05D003121 ORTHO05D003535 1.7e-29 133.7 203 47.8
Eucgr.G01791 Eucalyptus grandis HOM05D003121 ORTHO05D003535 1.7e-29 133.7 208 45.7
Manes.15G059200 Manihot esculenta HOM05D003121 ORTHO05D003535 1.7e-29 133.7 203 46.3
Phvul.007G017900 Phaseolus vulgaris HOM05D003121 ORTHO05D003535 1.7e-29 133.7 187 51.3
ECA234G0462 Erigeron canadensis HOM05D003121 ORTHO05D003535 2.2e-29 133.3 210 44.8
PGR042G3155 Punica granatum HOM05D003121 ORTHO05D003535 2.2e-29 133.3 208 47.1
Lj5g0004060 Lotus japonicus HOM05D003121 ORTHO05D003535 3.7e-29 132.5 203 49.8
MELO3C013333.2 Cucumis melo HOM05D003121 ORTHO05D003535 4.9e-29 132.1 211 46.4
RcHm_v2.0_Chr6g0278841 Rosa chinensis HOM05D003121 ORTHO05D003535 6.3e-29 131.7 213 43.7
COL.COLO4_17374 Corchorus olitorius HOM05D003121 ORTHO05D003535 1.8e-28 130.2 205 45.9
FvH4_2g15640 Fragaria vesca HOM05D003121 ORTHO05D003535 1.8e-28 130.2 213 42.3
arahy.Tifrunner.gnm1.ann1.LP37DI Arachis hypogaea HOM05D003121 ORTHO05D003535 2.4e-28 129.8 199 48.2
ATR0661G016 Amborella trichopoda HOM05D003121 ORTHO05D003535 4.1e-28 129.0 206 45.1
Glyma.10G283300 Glycine max HOM05D003121 ORTHO05D003535 5.4e-28 128.6 187 50.8
Actinidia21476 Actinidia chinensis HOM05D003121 ORTHO05D003535 2.7e-27 126.3 210 43.8
unitig_746.g26872 Utricularia gibba HOM05D003121 ORTHO05D003535 2.7e-27 126.3 214 43.5
MBI15_g18375_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D000087 3.5e-27 125.9 204 43.6
TPR.G2486 Trifolium pratense HOM05D003121 ORTHO05D003535 1.0e-26 124.4 204 46.1
VMungo0720G1452 Vigna mungo HOM05D003121 ORTHO05D003535 1.3e-26 124.0 202 48.0
FAN20G1288 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.6e-26 121.7 204 41.2
FAN24G0024 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.6e-26 121.7 204 41.2
Sed0012540 Sechium edule HOM05D003121 ORTHO05D003535 1.1e-25 120.9 207 42.5
TWI60G0855 Tripterygium wilfordii HOM05D003121 ORTHO05D003535 3.0e-23 112.8 201 45.8
Oeu028963.1 Olea europaea HOM05D003121 ORTHO05D003535 6.8e-23 111.7 157 46.5
SEGI_06864 Sequoiadendron giganteum HOM05D003121 ORTHO05D003535 2.0e-22 110.2 207 39.6
Lsat_1_v5_gn_4_71980 Lactuca sativa HOM05D003121 ORTHO05D003535 3.4e-22 109.4 208 42.8
Potri.009G138100 Populus trichocarpa HOM05D003121 ORTHO05D003535 2.2e-21 106.7 206 39.3
HPP92_007329 Vanilla planifolia HOM05D003121 ORTHO05D003535 2.9e-21 106.3 205 39.5
Sabra09G0107000 Salix brachista HOM05D003121 ORTHO05D003535 3.7e-21 105.9 200 40.0
CDE09G1210 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 8.3e-21 104.8 151 46.4
Lj5P177T42 Lonicera japonica HOM05D003121 ORTHO05D003535 1.7e-18 97.1 138 45.7
Eucgr.L03152 Eucalyptus grandis HOM05D003121 ORTHO05D003535 3.9e-18 95.9 186 40.3
Mapoly0015s0100 Marchantia polymorpha HOM05D003121 ORTHO05D003535 5.0e-18 95.5 223 36.8
CSS0049142 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.2e-16 90.9 130 46.9
CSS0005739 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.4e-15 87.4 143 41.3
COL.COLO4_32987 Corchorus olitorius HOM05D003121 ORTHO05D003535 1.4e-15 87.4 163 39.9
CSS0045143 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.8e-15 87.0 166 42.2
Pp3c8_9650 Physcomitrium patens HOM05D003121 ORTHO05D003535 1.8e-15 87.0 113 45.1
ECA236G3931 Erigeron canadensis HOM05D003121 ORTHO05D003535 6.8e-15 85.1 185 35.7
Sc14g0002330 Simmondsia chinensis HOM05D003121 ORTHO05D003535 8.9e-15 84.7 139 45.3
Aqoxy6G02792 Aquilegia oxysepala HOM05D003121 ORTHO05D003535 1.7e-13 80.5 42 95.2
SHI04584 Sapria himalayana HOM05D003121 ORTHO05D003535 6.4e-13 78.6 201 33.8
Zm00001eb002940 Zea mays HOM05D003121 ORTHO05D003535 1.1e-12 77.8 134 38.8
Os03g0136800 Oryza sativa ssp. japonica HOM05D003121 ORTHO05D003535 6.0e-11 72.0 142 37.3
BcaB07g29983 Brassica carinata HOM05D000059 ORTHO05D000128 1.0e-10 71.2 200 29.5
AagrBONN_evm.TU.Sc2ySwM_362.2486 Anthoceros agrestis HOM05D003121 ORTHO05D003535 1.7e-10 70.5 81 45.7
Aqoxy3G00398 Aquilegia oxysepala HOM05D003121 ORTHO05D003535 1.7e-10 70.5 64 65.6
Cre07.g348900 Chlamydomonas reinhardtii HOM05D003121 ORTHO05D003535 2.3e-10 70.1 107 41.1
DCAR_029977 Daucus carota HOM05D003121 ORTHO05D003535 9.5e-09 64.7 85 44.7
MD10G1127700 Malus domestica HOM05D003121 ORTHO05D003535 1.2e-08 64.3 79 51.9
PGSC0003DMG400015012 Solanum tuberosum HOM05D003121 ORTHO05D003535 6.2e-08 62.0 140 35.0
CBR_g49670 Chara braunii HOM05D002303 ORTHO05D007639 8.1e-08 61.6 143 34.3
Solyc12g056890.1 Solanum lycopersicum HOM05D003121 ORTHO05D003535 8.1e-08 61.6 147 35.4
SMO364G0026 Selaginella moellendorffii HOM05D003121 ORTHO05D003535 1.8e-07 60.5 183 31.7
Cpa.g.sc14.232 Carica papaya HOM05D003121 ORTHO05D003535 5.2e-07 58.9 84 44.0
PGSC0003DMG400045980 Solanum tuberosum HOM05D003121 ORTHO05D003535 8.9e-07 58.2 128 39.1
Sopen04g007110 Solanum pennellii HOM05D003121 ORTHO05D003535 3.4e-06 56.2 138 37.0
PGSC0003DMG401018151 Solanum tuberosum HOM05D003121 ORTHO05D003535 3.4e-06 56.2 159 32.1


User provided reference genes

Program Settings