Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 1.9e-89 332.4 157 100.0
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 9.3e-57 223.8 148 70.9
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 2.7e-56 222.2 150 66.7
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 1.9e-54 216.1 148 66.2
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 2.5e-54 215.7 148 66.2
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 4.3e-54 214.9 148 66.9
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 4.3e-54 214.9 149 64.4
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 4.3e-54 214.9 148 66.2
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 5.7e-54 214.5 148 66.9
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 5.7e-54 214.5 149 64.4
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 9.7e-54 213.8 149 63.8
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 1.6e-53 213.0 148 65.5
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.2e-53 212.6 149 63.8
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 2.2e-53 212.6 148 63.5
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 2.8e-53 212.2 148 64.9
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 8.2e-53 210.7 148 65.5
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 3.1e-52 208.8 148 62.8
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 6.9e-52 207.6 148 64.2
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 2.0e-51 206.1 148 65.5
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 3.4e-51 205.3 148 62.2
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 3.4e-51 205.3 148 63.5
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 7.7e-51 204.1 148 62.2
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.0e-50 203.8 148 62.2
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 1.3e-50 203.4 149 66.4
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 1.7e-50 203.0 148 61.5
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 1.7e-50 203.0 149 65.8
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 6.5e-50 201.1 148 62.8
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 6.5e-50 201.1 148 62.2
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 8.5e-50 200.7 148 59.5
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 1.1e-49 200.3 148 62.8
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 1.4e-49 199.9 148 61.5
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 1.9e-49 199.5 148 58.8
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 5.5e-49 198.0 148 60.1
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.5e-49 198.0 148 60.1
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 7.2e-49 197.6 148 60.1
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 9.4e-49 197.2 148 60.8
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 9.4e-49 197.2 148 60.8
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 9.4e-49 197.2 148 61.5
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 1.2e-48 196.8 150 58.0
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 1.2e-48 196.8 150 58.0
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 1.2e-48 196.8 148 60.8
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 1.2e-48 196.8 148 60.1
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 1.6e-48 196.4 148 60.1
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 1.6e-48 196.4 148 60.1
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 1.6e-48 196.4 148 59.5
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.1e-48 196.1 148 59.5
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.1e-48 196.1 148 59.5
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 2.1e-48 196.1 148 59.5
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 2.7e-48 195.7 148 61.5
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 2.7e-48 195.7 148 57.4
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 2.7e-48 195.7 148 60.1
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 2.7e-48 195.7 148 58.8
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 3.6e-48 195.3 148 60.8
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 4.6e-48 194.9 148 59.5
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 4.6e-48 194.9 148 61.5
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 4.6e-48 194.9 148 59.5
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 1.0e-47 193.7 154 61.0
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 1.0e-47 193.7 148 59.5
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 1.4e-47 193.4 148 58.1
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 1.4e-47 193.4 149 57.7
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 1.4e-47 193.4 148 58.1
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 1.4e-47 193.4 148 60.1
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 1.4e-47 193.4 148 60.1
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 1.8e-47 193.0 149 58.4
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 3.9e-47 191.8 148 59.5
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 5.1e-47 191.4 148 58.8
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.1e-46 190.3 148 58.1
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 1.5e-46 189.9 148 57.4
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 1.5e-46 189.9 148 58.8
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 2.0e-46 189.5 148 56.1
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 3.3e-46 188.7 148 57.4
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 3.3e-46 188.7 148 60.1
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 3.3e-46 188.7 148 58.1
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 4.4e-46 188.3 148 58.1
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 5.7e-46 188.0 148 57.4
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 5.7e-46 188.0 148 58.8
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 7.4e-46 187.6 149 61.7
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 3.7e-45 185.3 148 56.1
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 4.8e-45 184.9 148 57.4
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 8.2e-45 184.1 148 57.4
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.8e-44 183.0 151 56.3
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 9.1e-44 180.6 148 60.1
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 1.2e-43 180.3 148 54.7
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.5e-43 179.9 127 59.1
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 3.8e-42 175.3 170 49.4
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 3.8e-42 175.3 125 62.4
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 3.2e-41 172.2 149 54.4
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 9.4e-41 170.6 126 60.3
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 4.7e-40 168.3 126 59.5
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 6.7e-39 164.5 125 56.0
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.7e-37 158.7 150 48.0
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.8e-36 156.4 125 57.6
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.8e-36 156.4 116 58.6
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 3.5e-35 152.1 157 46.5
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 1.3e-34 150.2 107 61.7
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.2e-34 149.4 107 61.7
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 5.0e-34 148.3 126 56.3
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 2.1e-32 142.9 128 51.6
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 4.0e-31 138.7 168 40.5
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 3.3e-30 135.6 157 41.4
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.7e-29 133.3 159 40.3
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 4.1e-28 128.6 157 40.1
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 4.1e-28 128.6 157 40.1
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 9.1e-28 127.5 150 46.0
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 2.9e-26 122.5 158 39.2
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 4.4e-22 108.6 128 45.3
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 4.5e-19 98.6 64 68.8
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 5.0e-18 95.1 104 43.3
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 3.6e-16 89.0 64 57.8
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 1.7e-13 80.1 100 37.0
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 1.3e-10 70.5 54 51.9
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 6.6e-10 68.2 92 34.8
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 1.1e-09 67.4 121 28.9


User provided reference genes

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