Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 5.1e-123 444.5 236 100.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 5.0e-62 241.9 244 57.8
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.4e-51 207.2 242 50.8
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 5.7e-50 201.8 230 52.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 9.8e-50 201.1 226 53.1
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 3.7e-49 199.1 243 51.0
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 4.8e-49 198.7 242 52.1
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 8.3e-49 198.0 193 57.5
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 8.3e-49 198.0 253 52.6
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 8.3e-49 198.0 244 50.4
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.4e-48 197.2 225 52.4
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 7.0e-48 194.9 224 52.7
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 7.0e-48 194.9 238 50.8
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 5.9e-47 191.8 246 49.2
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 7.7e-47 191.4 197 56.9
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.9e-46 189.5 240 47.9
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.9e-46 189.5 196 55.6
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 5.0e-46 188.7 193 55.4
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 5.0e-46 188.7 230 50.9
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.5e-45 187.2 240 48.8
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.5e-45 186.4 250 48.0
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.2e-45 186.0 180 57.8
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 9.4e-45 184.5 243 49.4
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.2e-44 184.1 216 51.9
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.6e-44 183.7 180 57.2
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.6e-44 183.7 193 53.9
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 2.7e-44 183.0 190 54.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.6e-44 182.6 247 50.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 3.6e-44 182.6 209 54.5
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 4.7e-44 182.2 249 46.6
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 4.7e-44 182.2 197 54.3
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.0e-43 181.0 221 50.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.4e-43 180.6 257 46.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.4e-43 180.6 197 52.8
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.8e-43 180.3 233 50.6
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 2.3e-43 179.9 197 53.8
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.0e-43 179.1 212 50.5
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 5.2e-43 178.7 224 49.6
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.2e-43 178.7 186 56.5
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 8.8e-43 177.9 224 50.0
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.0e-42 176.8 240 47.9
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 2.0e-42 176.8 227 48.5
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 5.7e-42 175.3 209 51.2
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 6.3e-41 171.8 198 51.5
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.1e-40 171.0 190 52.6
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 2.4e-40 169.9 190 53.2
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.4e-40 168.7 200 53.0
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 7.0e-40 168.3 198 52.0
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 9.1e-40 167.9 212 48.6
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 9.1e-40 167.9 244 45.1
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.2e-39 167.5 178 56.2
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.0e-39 166.8 236 44.1
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 2.7e-39 166.4 192 53.6
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.3e-38 164.1 234 46.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.7e-38 163.7 115 73.0
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.9e-38 162.9 249 45.8
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.9e-38 162.9 245 45.7
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.8e-38 162.5 259 45.2
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 3.8e-38 162.5 246 44.3
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 5.0e-38 162.2 120 70.8
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 5.0e-38 162.2 222 48.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 5.0e-38 162.2 141 61.0
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.1e-37 161.0 259 44.4
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.1e-37 161.0 259 44.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 1.9e-37 160.2 243 44.9
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 2.5e-37 159.8 211 47.4
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 9.5e-37 157.9 232 43.1
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.6e-36 157.1 191 49.7
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.1e-36 156.8 266 42.1
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 2.8e-36 156.4 234 47.0
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.1e-36 155.2 104 74.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.1e-36 155.2 104 74.0
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 6.1e-36 155.2 255 45.5
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 8.0e-36 154.8 257 45.1
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 8.0e-36 154.8 255 44.7
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.0e-35 154.5 154 56.5
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-35 154.1 152 53.9
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-35 154.1 152 53.9
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 1.8e-35 153.7 152 53.9
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.3e-35 153.3 250 42.8
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 5.2e-35 152.1 229 46.3
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 1.2e-34 151.0 118 65.3
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.0e-34 150.2 116 65.5
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.6e-34 149.8 131 59.5
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.6e-34 149.8 116 66.4
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.6e-34 149.8 118 64.4
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 5.7e-34 148.7 137 57.7
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 7.5e-34 148.3 138 63.0
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 9.8e-34 147.9 113 69.0
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.7e-33 147.1 116 63.8
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.7e-33 146.0 161 53.4
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 6.4e-33 145.2 118 63.6
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 6.4e-33 145.2 244 41.4
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 1.8e-32 143.7 159 54.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.0e-30 137.9 157 53.5
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.1e-29 134.4 156 53.8
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 8.0e-28 128.3 163 47.9
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.4e-27 127.5 133 57.1
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.3e-27 126.7 155 49.0
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 5.0e-22 109.0 84 64.3
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 8.1e-20 101.7 152 46.1
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.8e-19 100.5 169 42.0
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 5.2e-19 99.0 191 39.8
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 3.2e-08 63.2 175 33.7


User provided reference genes

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