Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.1e-111 406.8 218 100.0
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.2e-46 190.7 224 54.9
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.9e-44 183.3 214 53.7
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.3e-43 180.6 219 53.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.1e-43 179.9 216 51.4
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.8e-43 179.5 217 53.0
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 6.3e-43 178.3 217 54.4
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 8.2e-43 177.9 214 53.3
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.4e-42 176.4 217 52.5
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.1e-42 175.6 219 52.1
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 6.9e-42 174.9 217 52.1
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 1.0e-40 171.0 216 50.9
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.7e-40 170.2 217 52.1
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.2e-40 169.9 216 50.9
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.1e-39 167.5 217 48.8
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.1e-39 167.5 222 51.8
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.1e-39 167.5 220 51.4
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.4e-39 167.2 217 51.6
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.2e-39 166.0 217 48.8
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 7.2e-39 164.9 218 51.4
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 7.2e-39 164.9 218 53.2
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.2e-38 164.1 222 51.4
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 6.1e-38 161.8 224 50.0
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 6.1e-38 161.8 212 51.9
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.8e-37 160.2 216 51.4
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.8e-37 160.2 217 50.2
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.9e-37 159.1 214 49.1
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.5e-36 156.4 215 50.7
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.3e-36 155.6 216 52.3
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.3e-36 155.6 219 47.9
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 7.4e-36 154.8 216 49.5
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 9.7e-36 154.5 217 48.4
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.3e-35 154.1 218 50.5
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.6e-35 153.7 215 50.2
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.6e-35 153.7 215 50.2
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.2e-35 153.3 213 47.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 2.8e-35 152.9 220 50.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 6.3e-35 151.8 214 48.6
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.2e-35 151.4 222 50.0
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.1e-34 149.4 213 49.8
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 5.3e-34 148.7 220 47.7
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 6.9e-34 148.3 213 48.4
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 9.1e-34 147.9 219 47.9
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.1e-34 147.9 219 46.1
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 9.1e-34 147.9 217 47.5
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.2e-33 147.5 219 46.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.2e-33 147.5 220 50.5
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 3.4e-33 146.0 220 47.7
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 4.5e-33 145.6 218 50.0
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 5.9e-33 145.2 228 46.9
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.0e-32 144.4 211 46.9
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.3e-32 144.1 210 48.6
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 1.3e-32 144.1 223 48.0
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 2.2e-32 143.3 218 47.2
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.8e-32 142.5 216 46.8
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 5.0e-32 142.1 225 46.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.5e-32 141.7 219 45.2
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.1e-31 141.0 228 46.5
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 7.2e-31 138.3 218 45.0
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 7.2e-31 138.3 215 42.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.6e-30 135.6 213 44.6
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-29 134.0 223 45.7
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.3e-29 133.3 222 45.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.8e-29 131.3 214 47.2
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.5e-28 130.6 189 49.2
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.5e-28 130.6 215 43.3
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.0e-28 130.2 224 48.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 2.6e-28 129.8 220 43.6
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.7e-28 127.9 189 48.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.7e-27 127.1 218 42.7
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.2e-27 126.7 218 45.9
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.8e-27 126.3 210 43.8
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 4.8e-27 125.6 184 48.9
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 6.3e-27 125.2 229 43.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.4e-26 124.0 217 42.9
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.8e-26 123.6 215 41.9
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 5.3e-26 122.1 230 41.7
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 6.9e-26 121.7 218 42.7
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.5e-25 120.6 226 41.2
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-25 120.6 218 42.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.6e-25 119.8 224 43.3
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 3.4e-25 119.4 222 43.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 5.9e-25 118.6 220 42.3
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 2.2e-24 116.7 224 40.6
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.2e-24 116.7 200 48.0
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.2e-24 116.7 228 43.0
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.9e-24 116.3 234 41.9
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 3.8e-24 115.9 217 42.9
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 5.0e-24 115.5 218 41.3
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 5.0e-24 115.5 218 41.3
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.5e-24 114.8 152 50.7
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.1e-23 114.4 216 39.8
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.1e-23 114.4 220 40.9
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.5e-23 113.2 224 43.3
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 4.2e-23 112.5 215 43.3
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 5.5e-23 112.1 210 41.4
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 9.4e-23 111.3 154 50.0
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 3.6e-22 109.4 201 43.3
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.0e-21 107.8 223 39.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.8e-21 107.1 221 39.8
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 8.8e-21 104.8 217 39.2
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 8.8e-21 104.8 209 38.8
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.5e-20 104.0 193 43.0
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.0e-20 103.6 193 44.0
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 4.4e-20 102.4 208 40.9
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.7e-19 100.5 213 39.0
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 2.2e-19 100.1 231 42.0
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.2e-19 100.1 177 42.9
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.2e-19 100.1 177 42.9
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 3.7e-19 99.4 249 37.8
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.1e-18 97.8 187 40.1
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 4.1e-18 95.9 213 39.4
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 6.5e-16 88.6 128 47.7
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 5.5e-15 85.5 181 38.1
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.1e-14 83.6 195 38.5
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 4.7e-14 82.4 159 42.8
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 4.0e-13 79.3 225 38.7
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.5e-12 77.4 219 36.1
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.7e-11 73.9 175 36.0
Thecc.06G128900 Theobroma cacao HOM05D005571 ORTHO05D006919 8.2e-11 71.6 74 51.4
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 8.2e-11 71.6 212 35.8
Thecc.04G308600 Theobroma cacao HOM05D005571 ORTHO05D006919 1.4e-10 70.9 74 51.4
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 4.1e-10 69.3 81 55.6
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 7.0e-10 68.6 191 36.6
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 9.1e-10 68.2 192 36.5
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 9.1e-10 68.2 192 36.5
Thecc.07G149400 Theobroma cacao HOM05D005571 ORTHO05D004433 2.7e-09 66.6 68 54.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-08 63.5 127 42.5
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 2.2e-08 63.5 127 42.5
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 3.8e-08 62.8 118 46.6
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 3.8e-08 62.8 118 46.6
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 1.2e-06 57.8 111 39.6


User provided reference genes

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