Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 0.0e+00 1080.1 576 100.0
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 7.3e-309 1063.1 576 98.6
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 3.6e-207 725.3 583 65.4
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 6.2e-207 724.5 580 66.0
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 8.9e-206 720.7 583 69.0
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 1.3e-204 716.8 568 69.4
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 2.4e-203 712.6 581 65.1
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 5.1e-201 704.9 584 63.5
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.5e-200 703.4 583 65.2
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 2.5e-200 702.6 583 64.2
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 5.6e-200 701.4 581 65.9
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 3.6e-199 698.7 582 65.1
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 4.7e-199 698.4 583 65.7
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 8.1e-199 697.6 585 64.3
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 4.0e-198 695.3 583 63.5
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 4.4e-197 691.8 584 64.9
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 4.4e-197 691.8 581 63.0
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 5.8e-197 691.4 501 70.3
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 5.8e-197 691.4 586 63.1
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.3e-196 690.3 584 62.0
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.3e-196 690.3 581 62.8
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 1.3e-196 690.3 582 62.4
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.9e-196 689.1 584 65.2
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.8e-196 688.7 502 69.9
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 4.9e-196 688.3 584 65.1
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 4.2e-195 685.3 498 68.3
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 1.2e-194 683.7 583 63.1
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 2.1e-194 682.9 576 60.9
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.7e-194 682.6 585 62.4
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 3.5e-194 682.2 611 60.6
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 3.5e-194 682.2 583 64.7
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 6.0e-194 681.4 585 62.4
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.3e-193 680.2 585 62.6
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 3.9e-193 678.7 505 68.5
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 8.7e-193 677.6 501 69.5
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 1.9e-192 676.4 584 62.8
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 1.9e-192 676.4 495 69.1
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 9.6e-192 674.1 504 68.5
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 9.6e-192 674.1 503 67.8
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 9.6e-192 674.1 584 63.7
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 9.6e-192 674.1 582 61.5
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 1.3e-191 673.7 584 63.9
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 1.6e-191 673.3 563 63.2
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 2.1e-191 672.9 585 61.4
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 6.2e-191 671.4 590 60.7
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 3.1e-190 669.1 585 61.4
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 4.0e-190 668.7 579 61.8
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 5.3e-190 668.3 507 67.9
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 5.3e-190 668.3 590 61.0
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 6.9e-190 667.9 582 61.9
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 9.0e-190 667.5 588 61.2
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 1.2e-189 667.2 578 61.6
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 2.6e-189 666.0 579 61.3
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 3.4e-189 665.6 587 60.8
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 7.6e-189 664.5 580 62.1
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 9.9e-189 664.1 589 61.0
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 2.9e-188 662.5 587 61.0
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 2.9e-188 662.5 586 60.9
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 2.9e-188 662.5 584 62.3
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 4.9e-188 661.8 584 64.0
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 4.9e-188 661.8 584 61.1
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 2.4e-187 659.4 585 63.1
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 5.4e-187 658.3 583 60.4
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 1.6e-186 656.8 589 58.9
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 3.9e-185 652.1 587 60.3
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.1e-184 650.6 585 61.2
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 1.9e-184 649.8 587 59.6
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 1.3e-183 647.1 494 65.0
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 2.1e-183 646.4 588 59.7
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 4.8e-183 645.2 500 67.0
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 6.2e-183 644.8 590 58.5
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 6.2e-183 644.8 490 66.3
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 8.1e-183 644.4 502 65.3
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 1.1e-182 644.0 588 59.7
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.1e-182 644.0 585 60.2
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 1.4e-182 643.7 581 59.2
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.8e-182 643.3 500 67.2
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 2.4e-182 642.9 587 57.9
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.2e-181 640.6 579 61.7
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 7.6e-181 637.9 500 65.2
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 7.6e-181 637.9 502 64.5
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.9e-180 636.0 503 66.0
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 3.8e-180 635.6 584 61.3
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 8.4e-180 634.4 503 65.4
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 1.9e-179 633.3 585 59.0
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.5e-179 632.9 584 61.6
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 4.2e-179 632.1 503 65.4
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 2.7e-178 629.4 502 64.7
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 3.5e-178 629.0 500 64.4
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 4.6e-178 628.6 585 59.3
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 8.7e-177 624.4 582 59.5
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 8.7e-177 624.4 501 65.3
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 1.1e-176 624.0 429 72.3
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.5e-176 623.6 500 64.4
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 3.3e-176 622.5 499 64.3
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 3.3e-176 622.5 588 57.1
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 6.2e-175 618.2 579 56.5
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 6.2e-175 618.2 571 62.0
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 1.1e-174 617.5 537 62.8
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 4.0e-174 615.5 513 61.2
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 5.3e-174 615.1 560 58.0
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 9.0e-174 614.4 503 62.2
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 1.2e-173 614.0 497 63.4
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 2.0e-173 613.2 580 60.0
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 4.5e-173 612.1 580 58.1
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 2.9e-172 609.4 499 62.9
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 1.4e-171 607.1 590 54.7
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 1.4e-171 607.1 580 57.2
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.5e-171 605.1 455 67.7
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 1.6e-170 603.6 495 64.0
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 6.0e-170 601.7 583 57.1
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 3.1e-166 589.3 422 69.0
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 2.9e-164 582.8 348 80.7
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 1.1e-163 580.9 581 56.1
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 9.4e-163 577.8 464 63.4
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 4.1e-158 562.4 504 58.9
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 2.1e-154 550.1 484 59.1
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 4.7e-154 548.9 383 70.2
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 7.4e-152 541.6 504 55.0
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 6.5e-148 528.5 499 58.3
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 7.5e-136 488.4 499 51.1
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.2e-132 476.9 478 48.7
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 2.7e-130 469.9 403 60.3
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 3.4e-128 463.0 432 53.7
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.7e-119 434.1 258 78.3
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 1.4e-118 431.0 410 57.3
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 1.8e-113 414.1 512 42.8
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 6.4e-111 405.6 441 47.6
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.5e-96 357.8 466 47.2
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.6e-93 347.8 500 43.8
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 4.3e-91 339.7 447 46.5
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.1e-86 325.1 298 59.7
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 3.9e-84 316.6 469 39.2
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 4.3e-83 313.2 377 50.1
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.1e-82 310.8 307 50.5
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 1.0e-68 265.4 326 42.6
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 1.3e-68 265.0 450 36.0
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 5.3e-65 253.1 240 59.2
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.2e-55 221.1 577 33.8
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 8.5e-39 166.0 264 39.8
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 7.2e-30 136.3 392 25.8
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 7.0e-25 119.8 143 49.0
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 2.2e-15 88.2 92 57.6
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 1.7e-07 62.0 77 42.9
Mapoly0032s0048 Marchantia polymorpha HOM05D012385 ORTHO05D014380 7.3e-06 56.6 146 30.1


User provided reference genes

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