Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 8.7e-237 824.3 876 100.0
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.5e-119 434.1 874 78.7
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 1.0e-104 385.6 870 74.3
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 3.7e-102 377.1 877 75.1
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 3.1e-101 374.0 876 72.0
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 2.6e-100 370.9 879 74.6
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 1.1e-95 355.5 876 73.9
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 1.8e-93 348.2 874 73.0
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 9.1e-93 345.9 870 72.0
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 1.7e-91 341.7 879 73.3
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 1.9e-90 338.2 872 67.0
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 8.0e-89 332.8 879 74.4
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 2.3e-88 331.3 875 73.4
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 3.3e-87 327.4 870 72.2
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 7.5e-87 326.2 878 62.6
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 1.3e-86 325.5 880 73.1
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 3.7e-86 323.9 874 73.3
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.4e-85 322.0 879 70.6
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 4.5e-84 317.0 876 68.7
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 1.7e-83 315.1 877 73.7
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 2.9e-83 314.3 878 72.8
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 6.5e-83 313.2 873 71.6
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 6.5e-83 313.2 875 72.5
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 1.1e-82 312.4 882 66.7
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 3.2e-82 310.8 873 72.7
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 7.2e-82 309.7 877 70.6
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 2.1e-81 308.1 877 65.1
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 4.7e-81 307.0 877 65.2
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 2.3e-80 304.7 877 68.2
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 5.2e-80 303.5 877 70.9
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 1.5e-79 302.0 863 70.6
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 2.0e-76 291.6 874 71.1
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 5.9e-76 290.0 876 69.5
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 2.5e-74 284.6 886 60.8
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 1.2e-73 282.3 878 61.2
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 6.1e-73 280.0 878 69.6
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 8.0e-73 279.6 871 69.2
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 8.9e-72 276.2 874 69.5
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 7.5e-71 273.1 879 69.5
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 9.8e-71 272.7 879 70.0
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 2.8e-70 271.2 876 69.7
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 6.3e-70 270.0 875 68.6
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 1.8e-69 268.5 883 69.2
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 5.4e-69 266.9 870 69.4
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 2.0e-68 265.0 873 69.3
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 3.5e-68 264.2 858 65.6
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 3.5e-68 264.2 880 69.5
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 7.8e-68 263.1 899 66.3
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 6.6e-67 260.0 870 69.1
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 7.3e-66 256.5 876 62.3
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 7.3e-66 256.5 876 62.3
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 9.5e-66 256.1 878 62.3
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 1.2e-65 255.8 878 68.5
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 2.8e-65 254.6 880 64.9
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 6.1e-65 253.4 878 69.5
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 2.3e-64 251.5 872 67.4
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 3.1e-64 251.1 878 68.3
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 3.1e-64 251.1 878 68.2
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 4.0e-64 250.8 871 60.0
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 5.2e-64 250.4 872 69.8
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 6.8e-64 250.0 873 61.2
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 3.4e-63 247.7 880 60.8
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 1.7e-62 245.4 380 71.6
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 2.4e-61 241.5 877 67.0
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 7.0e-61 240.0 869 68.4
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 2.0e-60 238.4 438 57.8
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.7e-59 235.3 200 62.0
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 3.9e-59 234.2 878 68.2
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 1.1e-58 232.6 887 57.8
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 1.2e-57 229.2 872 60.7
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 2.8e-57 228.0 875 68.9
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 3.6e-57 227.6 850 68.4
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 8.0e-57 226.5 781 74.6
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 1.8e-56 225.3 889 66.4
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 2.3e-56 224.9 368 71.2
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 5.2e-56 223.8 889 53.0
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 5.2e-56 223.8 368 70.9
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 6.8e-56 223.4 385 67.0
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 2.0e-55 221.9 805 71.1
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 5.8e-55 220.3 368 70.7
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 3.7e-54 217.6 385 67.8
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 3.7e-54 217.6 874 66.5
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.9e-53 215.3 839 68.2
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 3.2e-53 214.5 836 68.3
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.1e-50 206.1 878 66.7
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 9.5e-50 203.0 855 60.8
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 1.6e-49 202.2 380 65.8
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 2.3e-48 198.4 870 67.0
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 8.6e-43 179.9 382 61.5
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 1.1e-42 179.5 856 62.3
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.2e-39 169.5 332 37.7
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 9.9e-39 166.4 871 63.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.7e-38 165.6 412 49.3
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 6.4e-38 163.7 183 44.8
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 1.0e-35 156.4 886 64.2
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 1.5e-34 152.5 363 61.2
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 8.1e-33 146.7 156 50.0
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 7.1e-29 133.7 149 51.0
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 7.8e-28 130.2 185 37.8
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 1.0e-27 129.8 879 53.8
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 2.1e-25 122.1 193 37.8
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 4.0e-24 117.9 318 64.2
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 2.4e-21 108.6 103 56.3
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.0e-14 86.7 128 40.6
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 2.5e-13 82.0 112 43.8
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 3.5e-12 78.2 103 43.7
Gohir.D06G112750 Gossypium hirsutum HOM05D007101 ORTHO05D019476 1.4e-08 66.2 64 50.0
SEGI_28621 Sequoiadendron giganteum HOM05D007101 ORTHO05D008632 5.3e-08 64.3 147 31.3
SEGI_20674 Sequoiadendron giganteum HOM05D007101 ORTHO05D008632 1.2e-07 63.2 70 42.9
Gorai.010G128600 Gossypium raimondii HOM05D024651 ORTHO05D019476 2.9e-06 58.5 60 50.0


User provided reference genes

Program Settings