Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.5e-86 322.8 154 100.0
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.3e-63 245.7 152 83.6
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.6e-46 188.0 149 63.8
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 3.6e-45 185.3 152 61.2
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.1e-44 183.7 149 63.1
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-44 183.7 149 61.7
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.4e-44 183.3 149 60.4
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 2.3e-44 182.6 149 61.7
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.1e-44 182.2 149 63.8
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-44 182.2 149 61.1
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 4.0e-44 181.8 149 61.1
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.8e-44 181.0 149 62.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 6.8e-44 181.0 149 63.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.2e-43 180.3 149 61.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.2e-43 180.3 149 61.1
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.2e-43 180.3 149 61.1
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.5e-43 179.9 149 60.4
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.0e-43 179.5 149 62.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 2.6e-43 179.1 149 61.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.6e-43 179.1 149 61.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.4e-43 178.7 149 61.7
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.4e-43 178.3 149 60.4
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 4.4e-43 178.3 149 60.4
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.5e-43 177.6 152 59.2
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 9.8e-43 177.2 149 60.4
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 9.8e-43 177.2 149 61.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.7e-42 176.4 152 59.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.7e-42 176.4 147 62.6
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.7e-42 176.4 149 59.1
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.7e-42 176.4 155 55.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 2.9e-42 175.6 147 61.9
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 3.7e-42 175.3 149 59.7
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.7e-42 175.3 149 57.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 4.9e-42 174.9 152 58.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 8.3e-42 174.1 152 58.6
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 8.3e-42 174.1 152 58.6
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 8.3e-42 174.1 149 59.7
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-41 173.7 149 59.7
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.1e-41 173.7 149 57.7
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.4e-41 173.3 152 59.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-41 172.9 149 58.4
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.9e-41 172.9 149 58.4
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.4e-41 172.6 149 59.1
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 3.2e-41 172.2 152 56.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.2e-41 172.2 147 58.5
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-41 172.2 147 59.9
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-41 172.2 147 59.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 4.1e-41 171.8 152 56.6
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 7.1e-41 171.0 152 57.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 7.1e-41 171.0 152 57.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 7.1e-41 171.0 152 57.2
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 9.2e-41 170.6 152 57.9
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 9.2e-41 170.6 152 57.9
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 9.2e-41 170.6 152 57.9
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 9.2e-41 170.6 152 57.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 9.2e-41 170.6 152 57.2
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.6e-40 169.9 152 57.9
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.6e-40 169.9 149 57.0
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.6e-40 169.9 152 58.6
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.6e-40 169.9 149 58.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.1e-40 169.5 152 57.9
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.1e-40 169.5 152 56.6
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.1e-40 169.5 149 57.7
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.1e-40 169.5 152 58.6
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.5e-40 168.7 149 56.4
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 3.5e-40 168.7 152 56.6
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.5e-40 168.7 149 56.4
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 4.6e-40 168.3 152 57.2
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 4.6e-40 168.3 152 57.2
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 4.6e-40 168.3 152 57.2
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.6e-40 168.3 147 59.2
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 4.6e-40 168.3 147 59.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.0e-40 167.9 149 57.0
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 6.0e-40 167.9 152 55.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 6.0e-40 167.9 152 57.9
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.8e-40 167.5 149 57.0
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 7.8e-40 167.5 152 53.9
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.0e-39 167.2 149 59.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.0e-39 167.2 149 59.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.0e-39 167.2 152 55.9
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.0e-39 167.2 149 57.0
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.0e-39 167.2 152 55.9
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-39 166.8 149 59.1
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-39 166.4 150 56.0
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.7e-39 166.4 152 55.9
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.3e-39 166.0 152 56.6
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.0e-39 165.6 152 57.2
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.0e-39 165.6 152 55.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.0e-39 165.6 152 55.9
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.0e-39 165.6 152 55.3
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 3.9e-39 165.2 152 53.3
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 3.9e-39 165.2 149 58.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 5.1e-39 164.9 152 55.3
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 5.1e-39 164.9 152 57.2
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 5.1e-39 164.9 149 57.0
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 6.6e-39 164.5 149 57.7
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.6e-39 164.5 147 57.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.6e-39 164.5 149 59.1
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 8.6e-39 164.1 149 56.4
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 8.6e-39 164.1 147 56.5
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 8.6e-39 164.1 149 57.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.5e-38 163.3 147 56.5
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.9e-38 162.9 152 55.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 2.5e-38 162.5 152 54.6
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.5e-38 162.5 155 52.9
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 3.3e-38 162.2 147 54.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 4.3e-38 161.8 149 56.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.3e-38 161.8 147 55.8
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 5.6e-38 161.4 150 54.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 7.3e-38 161.0 152 53.9
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 7.3e-38 161.0 149 55.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.2e-37 160.2 149 54.4
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.1e-37 159.5 149 55.0
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.8e-37 159.1 149 55.0
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 3.6e-37 158.7 150 54.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 6.2e-37 157.9 152 53.3
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 6.2e-37 157.9 150 52.7
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 6.2e-37 157.9 152 52.6
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 8.1e-37 157.5 150 52.0
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-36 156.8 150 53.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.4e-36 156.8 147 55.1
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.4e-36 156.8 147 55.1
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-36 156.4 150 52.0
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.3e-36 156.0 152 54.6
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.3e-36 156.0 152 52.6
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 4.0e-36 155.2 143 53.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-36 154.8 149 54.4
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-36 154.8 150 52.7
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-36 154.8 150 54.0
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.9e-36 154.1 147 52.4
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 8.9e-36 154.1 147 52.4
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-36 154.1 149 53.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-36 154.1 149 54.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.5e-35 153.3 147 52.4
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.0e-35 152.9 147 54.4
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.6e-35 152.5 150 55.3
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 3.4e-35 152.1 137 57.7
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.4e-35 151.8 149 53.7
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.3e-34 150.2 146 51.4
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.3e-34 150.2 146 51.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.2e-34 149.4 150 54.7
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 6.4e-34 147.9 150 53.3
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.4e-33 146.0 150 50.0
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.2e-33 145.6 149 51.7
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-32 143.3 149 50.3
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 6.0e-32 141.4 144 50.0
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.0e-32 141.4 152 48.7
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-31 140.6 158 48.1
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-31 140.6 152 48.7
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.9e-31 138.7 158 47.5
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.1e-30 137.1 114 58.8
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.6e-29 133.3 156 44.2
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.6e-29 133.3 151 47.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.6e-29 132.1 156 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.1e-29 131.0 150 45.3
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.8e-28 129.8 152 45.4
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 6.8e-28 127.9 151 45.0
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-27 126.3 149 44.3
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 7.6e-27 124.4 151 43.0
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.9e-27 124.0 156 42.3
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 4.2e-25 118.6 151 42.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.7e-23 110.9 144 38.2
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.6e-22 108.2 99 55.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.8e-21 105.9 144 39.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.8e-21 105.1 144 36.8
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.1e-21 104.4 110 43.6
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.8e-19 98.2 144 36.8
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.2e-18 96.3 106 49.1
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.0e-16 88.2 107 40.2
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.0e-15 87.4 86 55.8
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.3e-14 82.0 108 42.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.7e-08 62.8 70 48.6


User provided reference genes

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