Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 1.9e-98 362.5 181 100.0
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.4e-56 223.4 177 61.6
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 1.3e-54 216.9 168 64.3
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 1.5e-50 203.4 169 57.4
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 6.3e-49 198.0 174 55.2
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.4e-48 196.8 177 53.1
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.1e-48 195.7 165 53.3
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.0e-47 193.0 168 55.4
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.5e-47 192.2 165 53.3
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 4.5e-47 191.8 174 52.3
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 5.9e-47 191.4 164 55.5
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.7e-46 189.9 172 52.3
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 3.8e-46 188.7 167 57.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 3.8e-46 188.7 165 57.0
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 8.6e-46 187.6 164 56.1
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.1e-45 187.2 168 57.1
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 1.5e-45 186.8 168 53.6
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.9e-45 186.4 168 52.4
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 2.5e-45 186.0 172 50.6
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 2.5e-45 186.0 172 50.6
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 5.5e-45 184.9 179 50.8
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 7.2e-45 184.5 177 49.7
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 9.5e-45 184.1 167 55.7
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 1.2e-44 183.7 168 53.6
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.1e-44 183.0 172 50.0
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 3.6e-44 182.2 176 51.7
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 4.7e-44 181.8 168 51.8
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 4.7e-44 181.8 168 53.6
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 4.7e-44 181.8 167 53.3
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 4.7e-44 181.8 168 52.4
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 6.1e-44 181.4 168 53.0
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 6.1e-44 181.4 168 53.0
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 8.0e-44 181.0 168 53.0
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 1.4e-43 180.3 168 52.4
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.4e-43 180.3 168 53.0
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 1.8e-43 179.9 168 53.0
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 1.8e-43 179.9 163 55.2
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.8e-43 179.9 170 51.8
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 2.3e-43 179.5 169 55.0
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.0e-43 179.1 169 55.0
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 5.2e-43 178.3 177 50.8
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 5.2e-43 178.3 177 50.8
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 5.2e-43 178.3 174 50.6
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 8.9e-43 177.6 182 50.5
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.5e-42 176.8 182 47.8
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 2.0e-42 176.4 171 53.2
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 2.6e-42 176.0 168 51.2
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 5.7e-42 174.9 173 46.8
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 7.5e-42 174.5 169 50.3
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 7.5e-42 174.5 169 53.8
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.3e-41 173.7 163 56.4
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.2e-41 172.9 172 47.7
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 2.8e-41 172.6 163 55.2
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 2.8e-41 172.6 171 52.0
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.8e-41 172.6 191 46.6
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 4.9e-41 171.8 164 51.8
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.1e-40 170.6 177 50.3
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 4.1e-40 168.7 164 52.4
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 7.0e-40 167.9 194 44.8
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 1.2e-39 167.2 164 50.0
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.6e-39 166.8 168 51.8
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 1.6e-39 166.8 180 47.2
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 2.0e-39 166.4 173 46.8
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 4.5e-39 165.2 170 50.0
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 7.8e-39 164.5 177 49.7
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.0e-38 164.1 169 52.1
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.3e-38 163.7 179 50.3
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 2.3e-38 162.9 175 49.7
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 2.3e-38 162.9 175 49.7
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.3e-38 162.9 170 51.2
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 1.1e-37 160.6 187 46.5
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 3.3e-37 159.1 166 51.2
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 4.3e-37 158.7 156 49.4
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 7.3e-37 157.9 158 51.3
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.2e-36 157.1 205 44.9
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 2.1e-36 156.4 167 48.5
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 2.8e-36 156.0 178 46.6
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 2.8e-36 156.0 167 48.5
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 3.6e-36 155.6 157 49.7
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 6.1e-36 154.8 172 47.7
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 6.1e-36 154.8 172 47.7
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 8.0e-36 154.5 178 46.1
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 1.0e-35 154.1 167 47.3
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 2.3e-35 152.9 182 46.7
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 2.3e-35 152.9 117 62.4
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 4.0e-35 152.1 163 48.5
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 5.2e-35 151.8 177 46.9
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.1e-32 144.1 166 49.4
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 2.4e-32 142.9 144 48.6
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 4.1e-32 142.1 130 53.1
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 5.4e-32 141.7 91 70.3
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 5.4e-32 141.7 175 45.1
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 7.0e-32 141.4 119 59.7
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 2.7e-31 139.4 170 45.9
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 3.5e-31 139.0 164 45.7
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.3e-30 137.1 125 54.4
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 5.6e-29 131.7 179 41.3
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 9.5e-29 131.0 153 44.4
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 9.5e-29 131.0 159 43.4
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 1.1e-27 127.5 93 64.5
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 4.0e-27 125.6 169 42.0
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 5.2e-27 125.2 207 35.7
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 4.4e-26 122.1 178 39.3
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 3.7e-25 119.0 174 40.8
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.4e-24 117.1 168 41.1
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 1.9e-24 116.7 71 78.9
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.1e-24 115.5 79 68.4
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 9.2e-24 114.4 162 42.0
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 8.6e-22 107.8 138 44.9
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.2e-20 104.0 84 56.0
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.2e-20 104.0 166 37.3
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 2.1e-20 103.2 194 37.6
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 2.1e-20 103.2 194 37.6
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 2.0e-18 96.7 74 55.4
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 3.3e-13 79.3 84 52.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 5.6e-13 78.6 87 40.2
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 7.3e-13 78.2 70 55.7
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.7e-12 75.5 79 53.2
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.4e-08 63.9 148 31.1
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 1.9e-08 63.5 84 41.7


User provided reference genes

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