Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01600 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 3.4e-155 551.6 270 100.0
Aqoxy7G02135 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 3.4e-155 551.6 270 100.0
Nn2g12624 Nelumbo nucifera HOM05D005868 ORTHO05D006964 4.9e-114 414.8 269 75.8
PSO170G5445 Papaver somniferum HOM05D005868 ORTHO05D006964 1.6e-112 409.8 270 75.9
PSO455G0232 Papaver somniferum HOM05D005868 ORTHO05D006964 8.7e-111 404.1 272 74.3
Cpa.g.sc165.3 Carica papaya HOM05D005868 ORTHO05D006964 1.3e-109 400.2 257 75.5
CiPaw.06G052800 Carya illinoinensis HOM05D005868 ORTHO05D006964 4.0e-108 395.2 256 75.8
vmacro16514 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 4.5e-107 391.7 257 74.3
QL02p087973 Quercus lobata HOM05D005868 ORTHO05D006964 5.8e-107 391.3 250 75.2
Thecc.09G124300 Theobroma cacao HOM05D005868 ORTHO05D006964 5.8e-107 391.3 268 71.6
Rhsim01G0074500 Rhododendron simsii HOM05D005868 ORTHO05D006964 7.6e-107 391.0 275 72.0
Zm00001eb205580 Zea mays HOM05D005868 ORTHO05D006964 9.9e-107 390.6 249 75.1
Atru.chr7.1216 Acer truncatum HOM05D005868 ORTHO05D006964 1.7e-106 389.8 246 77.2
Os02g0202600 Oryza sativa ssp. japonica HOM05D005868 ORTHO05D006964 4.9e-106 388.3 251 74.1
Duzib150G0047 Durio zibethinus HOM05D005868 ORTHO05D006964 8.4e-106 387.5 268 71.6
Gohir.A05G017300 Gossypium hirsutum HOM05D005868 ORTHO05D006964 1.1e-105 387.1 248 77.0
CAN.G377.18 Capsicum annuum HOM05D005868 ORTHO05D006964 2.4e-105 386.0 284 68.3
Lj2A993T36 Lonicera japonica HOM05D005868 ORTHO05D006964 3.2e-105 385.6 241 78.0
Ciclev10009129m.g Citrus clementina HOM05D005868 ORTHO05D006964 5.4e-105 384.8 260 72.3
Gorai.009G018600 Gossypium raimondii HOM05D005868 ORTHO05D006964 7.1e-105 384.4 271 72.7
FAN13G1606 Fragaria x ananassa HOM05D001017 ORTHO05D006964 9.3e-105 384.0 254 74.0
PGSC0003DMG402020668 Solanum tuberosum HOM05D005868 ORTHO05D006964 9.3e-105 384.0 284 67.6
FvH4_5g12980 Fragaria vesca HOM05D005868 ORTHO05D006964 1.6e-104 383.3 254 74.0
Prupe.7G240900 Prunus persica HOM05D005868 ORTHO05D006964 2.1e-104 382.9 254 73.2
CSS0026098 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 2.7e-104 382.5 274 70.4
Actinidia40461 Actinidia chinensis HOM05D005868 ORTHO05D006964 4.6e-104 381.7 273 69.2
Solyc12g006670.3 Solanum lycopersicum HOM05D005868 ORTHO05D006964 4.6e-104 381.7 284 67.6
Sopen12g002620 Solanum pennellii HOM05D005868 ORTHO05D006964 6.0e-104 381.3 284 67.6
THA.LOC104808997 Tarenaya hassleriana HOM05D005868 ORTHO05D006964 1.0e-103 380.6 271 70.5
DCAR_009552 Daucus carota HOM05D005868 ORTHO05D006964 1.8e-103 379.8 266 69.5
Gohir.D05G018200 Gossypium hirsutum HOM05D005868 ORTHO05D006964 1.8e-103 379.8 247 76.5
FAN08G1464 Fragaria x ananassa HOM05D005868 ORTHO05D006964 2.3e-103 379.4 250 74.4
RcHm_v2.0_Chr2g0088741 Rosa chinensis HOM05D005868 ORTHO05D006964 2.3e-103 379.4 250 74.0
RcHm_v2.0_Chr2g0088971 Rosa chinensis HOM05D005868 ORTHO05D006964 2.3e-103 379.4 250 74.0
Lj3g0005718 Lotus japonicus HOM05D005868 ORTHO05D006964 5.1e-103 378.3 257 72.0
Dinv41522 Davidia involucrata HOM05D005868 ORTHO05D006964 8.7e-103 377.5 242 75.6
FAN18G3119 Fragaria x ananassa HOM05D005868 ORTHO05D006964 1.1e-102 377.1 250 74.0
MD15G1175100 Malus domestica HOM05D005868 ORTHO05D006964 2.5e-102 375.9 254 71.3
Medtr8g073315 Medicago truncatula HOM05D005868 ORTHO05D006964 2.5e-102 375.9 245 74.7
HPP92_000663 Vanilla planifolia HOM05D005868 ORTHO05D006964 4.3e-102 375.2 266 69.5
arahy.Tifrunner.gnm1.ann1.1Z3A91 Arachis hypogaea HOM05D005868 ORTHO05D006964 5.6e-102 374.8 266 69.2
MELO3C004517.2 Cucumis melo HOM05D005868 ORTHO05D006964 5.6e-102 374.8 251 72.5
Eucgr.C04189 Eucalyptus grandis HOM05D005868 ORTHO05D006964 9.6e-102 374.0 270 69.6
Lalb_Chr12g0197851 Lupinus albus HOM05D005868 ORTHO05D006964 9.6e-102 374.0 265 68.7
AL4G17010 Arabidopsis lyrata HOM05D005868 ORTHO05D006964 1.3e-101 373.6 251 72.1
Carub.0004s0528 Capsella rubella HOM05D005868 ORTHO05D006964 2.1e-101 372.9 251 71.7
Sp4g04970 Schrenkiella parvula HOM05D005868 ORTHO05D006964 2.8e-101 372.5 250 71.2
CsaV3_2G002760 Cucumis sativus L. HOM05D005868 ORTHO05D006964 3.7e-101 372.1 251 72.1
QL93p0150_0012 Quercus lobata HOM05D005868 ORTHO05D006964 3.7e-101 372.1 233 76.0
AT2G25570 Arabidopsis thaliana HOM05D005868 ORTHO05D006964 4.8e-101 371.7 270 67.8
VMungo0251G3516 Vigna mungo HOM05D005868 ORTHO05D006964 4.8e-101 371.7 249 72.3
Phvul.003G286500 Phaseolus vulgaris HOM05D005868 ORTHO05D006964 3.1e-100 369.0 249 71.5
BcaC07g40857 Brassica carinata HOM05D005868 ORTHO05D006964 5.3e-100 368.2 264 66.7
Glyma.08G274300 Glycine max HOM05D005868 ORTHO05D006964 5.3e-100 368.2 254 69.3
Glyma.18G237200 Glycine max HOM05D005868 ORTHO05D006964 6.9e-100 367.9 249 70.7
HPP92_000683 Vanilla planifolia HOM05D005868 ORTHO05D006964 6.9e-100 367.9 266 68.0
C08p38550 Brassica napus HOM05D005868 ORTHO05D006964 1.2e-99 367.1 264 66.7
BolC8t51427H Brassica oleracea HOM05D005868 ORTHO05D006964 1.2e-99 367.1 264 66.7
DCAR_023114 Daucus carota HOM05D005868 ORTHO05D006964 1.2e-99 367.1 283 65.0
MSTRG.20108 Avicennia marina HOM05D005868 ORTHO05D006964 3.4e-99 365.5 247 71.3
A09p55560 Brassica napus HOM05D005868 ORTHO05D006964 4.5e-99 365.2 266 66.5
BraA09t40958Z Brassica rapa HOM05D005868 ORTHO05D006964 4.5e-99 365.2 266 66.5
Manes.07G113800 Manihot esculenta HOM05D005868 ORTHO05D006964 5.8e-99 364.8 249 71.5
BcaB08g35195 Brassica carinata HOM05D005868 ORTHO05D006964 1.0e-98 364.0 271 64.6
Peaxi162Scf00984g00020 Petunia axillaris HOM05D005868 ORTHO05D006964 2.2e-98 362.8 278 65.5
Lsat_1_v5_gn_2_95580 Lactuca sativa HOM05D005868 ORTHO05D006964 8.4e-98 360.9 266 67.7
Aa31LG6G5930 Aethionema arabicum HOM05D005868 ORTHO05D006964 1.9e-97 359.8 285 64.6
ATR0322G055 Amborella trichopoda HOM05D005868 ORTHO05D006964 9.3e-97 357.5 250 69.6
Sabra16G0124800 Salix brachista HOM05D005868 ORTHO05D006964 9.3e-97 357.5 272 67.6
ClCG11G002940 Citrullus lanatus HOM05D005868 ORTHO05D006964 1.2e-96 357.1 297 62.0
TAR383G0149 Trochodendron aralioides HOM05D005868 ORTHO05D006964 1.2e-96 357.1 269 67.7
unitig_37.g12428 Utricularia gibba HOM05D005868 ORTHO05D006964 1.2e-96 357.1 244 70.1
SHI18654 Sapria himalayana HOM05D005868 ORTHO05D006964 6.0e-96 354.8 246 70.3
COL.COLO4_11936 Corchorus olitorius HOM05D005868 ORTHO05D006964 1.3e-95 353.6 250 69.6
RcHm_v2.0_Chr2g0089021 Rosa chinensis HOM05D005868 ORTHO05D006964 1.8e-95 353.2 243 72.4
ECA238G3092 Erigeron canadensis HOM05D005868 ORTHO05D006964 3.0e-95 352.4 268 65.7
Haze_25605 Corylus avellana HOM05D005868 ORTHO05D006964 3.9e-95 352.1 290 63.1
Migut.N02220 Erythranthe guttata HOM05D005868 ORTHO05D006964 1.9e-94 349.7 264 64.8
Nitab4.5_0005139g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 4.3e-94 348.6 278 64.0
MD02G1034400 Malus domestica HOM05D005868 ORTHO05D006964 2.8e-93 345.9 254 66.1
Medtr0040s0110 Medicago truncatula HOM05D005868 ORTHO05D006964 2.6e-91 339.3 244 68.9
GSVIVG01015515001 Vitis vinifera HOM05D000032 ORTHO05D001620 5.8e-91 338.2 266 63.2
Potri.001G219400 Populus trichocarpa HOM05D005868 ORTHO05D006964 7.6e-91 337.8 264 64.8
HanXRQChr07g0197781 Helianthus annuus HOM05D005868 ORTHO05D006964 1.3e-90 337.0 235 68.9
TPR.G21777 Trifolium pratense HOM05D005868 ORTHO05D006964 5.0e-90 335.1 251 67.3
Sed0015563 Sechium edule HOM05D005868 ORTHO05D006964 1.4e-89 333.6 259 66.8
Cc06_g08680 Coffea canephora HOM05D005868 ORTHO05D006964 2.3e-87 326.2 209 77.0
Eucgr.C04191 Eucalyptus grandis HOM05D005868 ORTHO05D006964 1.7e-82 310.1 201 74.1
CANSAT35G1449 Cannabis sativa HOM05D005868 ORTHO05D006964 5.7e-78 295.0 269 59.9
CAN.G377.12 Capsicum annuum HOM05D005868 ORTHO05D006964 1.8e-76 290.0 284 56.7
Prupe.6G277700 Prunus persica HOM05D005868 ORTHO05D006964 9.1e-76 287.7 254 57.9
Thhalv10023629m.g Eutrema salsugineum HOM05D005868 ORTHO05D006964 1.2e-75 287.3 175 77.1
HanXRQChr14g0452021 Helianthus annuus HOM05D005868 ORTHO05D006964 7.7e-75 284.6 235 63.4
arahy.Tifrunner.gnm1.ann1.T37JIE Arachis hypogaea HOM05D005868 ORTHO05D006964 1.3e-74 283.9 266 57.1
SEGI_01723 Sequoiadendron giganteum HOM05D005868 ORTHO05D006964 1.3e-74 283.9 273 53.8
CSS0035520 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 2.2e-74 283.1 302 53.6
CSS0040694 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 2.9e-74 282.7 303 53.1
CARHR115770 Cardamine hirsuta HOM05D005868 ORTHO05D006964 1.1e-73 280.8 172 76.2
EL10Ac8g18635 Beta vulgaris HOM05D005868 ORTHO05D006964 3.9e-71 272.3 265 54.3
Hund09137 Selenicereus undatus HOM05D005868 ORTHO05D006964 2.6e-70 269.6 274 52.6
PGR102G1613 Punica granatum HOM05D005868 ORTHO05D006964 7.4e-70 268.1 268 52.2
Ca_25916_v3 Cicer arietinum L. HOM05D005868 ORTHO05D006964 8.2e-69 264.6 266 53.8
Sc08g0006690 Simmondsia chinensis HOM05D005868 ORTHO05D006964 2.4e-68 263.1 263 52.5
TWI32G0760 Tripterygium wilfordii HOM05D005868 ORTHO05D006964 2.4e-68 263.1 251 56.2
Ah.09g226020 Amaranthus hybridus HOM05D005868 ORTHO05D006964 5.9e-67 258.5 266 51.9
SGA_v2.0_scaffold120G32883 Striga asiatica HOM05D005868 ORTHO05D006964 2.9e-66 256.1 242 56.6
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.6e-64 249.2 162 75.3
AUR62013373 Chenopodium quinoa HOM05D005868 ORTHO05D006964 1.3e-61 240.7 266 48.9
MBI04_g07645_MAGBIO Magnolia biondii HOM05D005868 ORTHO05D006964 5.3e-60 235.3 167 70.7
Nitab4.5_0002556g0090 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.3e-58 230.7 152 73.7
vmacro20542 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 3.8e-58 229.2 299 50.2
SalBow5G0777 Salvia bowleyana HOM05D005868 ORTHO05D006964 5.7e-54 215.3 288 43.8
CDE04G0864 Ceratophyllum demersum HOM05D005868 ORTHO05D006964 9.8e-54 214.5 220 50.9
Mapoly0058s0058 Marchantia polymorpha HOM05D005868 ORTHO05D006964 2.8e-53 213.0 265 43.4
AUR62033475 Chenopodium quinoa HOM05D005868 ORTHO05D006964 1.4e-47 194.1 233 44.2
Pp3c21_8470 Physcomitrium patens HOM05D005868 ORTHO05D006964 1.7e-42 177.2 238 41.6
FAN23G1471 Fragaria x ananassa HOM05D005868 ORTHO05D006964 2.8e-40 169.9 122 69.7
Eucgr.C03944 Eucalyptus grandis HOM05D005868 ORTHO05D006964 4.6e-35 152.5 104 73.1
RcHm_v2.0_Chr2g0088921 Rosa chinensis HOM05D005868 ORTHO05D006964 4.7e-32 142.5 153 52.3
RcHm_v2.0_Chr2g0088781 Rosa chinensis HOM05D005868 ORTHO05D006964 2.9e-29 133.3 86 72.1
FvH4_1g05000 Fragaria vesca HOM05D005868 ORTHO05D006964 8.3e-29 131.7 76 81.6
RcHm_v2.0_Chr2g0088761 Rosa chinensis HOM05D005868 ORTHO05D006964 6.2e-24 115.5 92 60.9
RcHm_v2.0_Chr2g0088941 Rosa chinensis HOM05D005868 ORTHO05D006964 1.5e-22 110.9 131 47.3
CARHR115780 Cardamine hirsuta HOM05D005868 ORTHO05D006964 2.3e-18 97.1 80 57.5
CBR_g783 Chara braunii HOM05D005868 ORTHO05D006964 5.1e-18 95.9 185 35.1
RcHm_v2.0_Chr3g0491871 Rosa chinensis HOM05D005868 ORTHO05D006964 7.6e-14 82.0 80 50.0
MBI04_g07643_MAGBIO Magnolia biondii HOM05D005868 ORTHO05D006964 4.1e-12 76.3 39 84.6
Eucgr.L03701 Eucalyptus grandis HOM05D005868 ORTHO05D006964 1.7e-10 70.9 73 53.4
RcHm_v2.0_Chr2g0088771 Rosa chinensis HOM05D005868 ORTHO05D006964 1.1e-09 68.2 37 86.5
RcHm_v2.0_Chr2g0088931 Rosa chinensis HOM05D005868 ORTHO05D006964 1.1e-09 68.2 37 86.5
Psat7g152720 Pisum sativum HOM05D005868 ORTHO05D006964 1.4e-07 61.2 66 50.0
FAN02G0970 Fragaria x ananassa HOM05D023359 ORTHO05D006964 3.1e-07 60.1 69 44.9


User provided reference genes

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