Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 7.4e-107 390.6 200 100.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.1e-73 280.4 184 77.7
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.7e-71 273.1 169 78.7
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.7e-69 265.0 183 74.3
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 4.7e-69 265.0 188 72.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 6.1e-69 264.6 204 68.1
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.3e-68 262.7 175 73.7
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.0e-68 262.3 160 78.1
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 3.0e-68 262.3 182 73.1
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.9e-68 261.9 185 72.4
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.9e-68 261.9 197 68.5
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 8.8e-68 260.8 200 67.5
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 8.8e-68 260.8 188 71.3
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 2.6e-67 259.2 178 73.0
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 5.7e-67 258.1 164 74.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 5.7e-67 258.1 195 66.7
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 7.4e-67 257.7 193 68.4
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 9.7e-67 257.3 195 67.7
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.3e-66 256.9 188 70.7
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 2.2e-66 256.1 193 67.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 2.2e-66 256.1 187 70.1
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 4.8e-66 255.0 179 70.9
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.8e-66 255.0 187 69.5
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.8e-66 255.0 183 72.7
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 8.2e-66 254.2 175 69.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.1e-65 253.8 183 72.1
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.1e-65 252.3 187 69.0
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 5.3e-65 251.5 186 65.6
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.3e-65 251.5 191 68.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 7.0e-65 251.1 188 70.2
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 9.1e-65 250.8 183 68.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.2e-64 250.4 162 72.2
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.0e-64 249.6 161 75.2
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.0e-64 249.6 167 73.1
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 4.5e-64 248.4 166 72.3
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 4.5e-64 248.4 179 66.5
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 4.5e-64 248.4 166 75.9
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 7.7e-64 247.7 172 70.9
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 7.7e-64 247.7 161 74.5
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.0e-63 247.3 177 67.8
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.3e-63 246.9 188 67.0
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.2e-63 246.1 169 71.0
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 3.8e-63 245.4 172 68.0
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 6.5e-63 244.6 173 69.9
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 4.2e-62 241.9 165 72.7
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 7.2e-62 241.1 198 65.2
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 9.4e-62 240.7 194 67.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 9.4e-62 240.7 184 64.7
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 9.4e-62 240.7 193 65.3
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.2e-61 240.4 189 61.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.6e-61 240.0 186 68.8
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.7e-61 238.4 172 69.2
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 4.7e-61 238.4 190 67.9
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 6.1e-61 238.0 188 65.4
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 6.1e-61 238.0 193 65.8
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 1.2e-59 233.8 193 66.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 4.4e-59 231.9 168 64.9
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 4.4e-59 231.9 187 61.5
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 5.7e-59 231.5 184 65.2
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 4.8e-58 228.4 175 62.9
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 6.3e-58 228.0 176 62.5
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.2e-58 227.6 193 59.1
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.1e-57 227.3 166 66.9
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.8e-57 226.5 243 52.3
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 3.1e-57 225.7 164 67.1
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.6e-56 223.4 188 66.0
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 7.7e-56 221.1 152 74.3
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 7.7e-56 221.1 185 61.6
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.3e-55 220.3 164 65.9
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.3e-55 220.3 164 65.9
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.3e-55 220.3 194 59.8
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 2.2e-55 219.5 181 60.8
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.9e-55 219.2 181 60.8
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 2.9e-55 219.2 164 65.2
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 2.9e-55 219.2 164 65.2
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 3.8e-55 218.8 164 65.2
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 5.0e-55 218.4 174 67.2
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 5.0e-55 218.4 167 64.7
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 8.5e-55 217.6 164 63.4
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 8.5e-55 217.6 181 60.8
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 1.1e-54 217.2 174 66.7
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 7.2e-54 214.5 164 62.2
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 9.4e-54 214.2 180 58.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.6e-53 213.4 163 63.2
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 3.0e-52 209.1 167 62.3
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.5e-51 206.8 147 69.4
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 4.4e-51 205.3 177 59.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 7.5e-51 204.5 140 70.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.7e-50 202.2 118 81.4
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 6.3e-50 201.4 145 69.0
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.0e-48 196.4 133 71.4
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 7.7e-48 194.5 131 71.0
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.8e-42 176.0 183 55.2
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 5.9e-40 168.3 189 45.5
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.0e-39 167.5 130 66.2
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.5e-38 162.9 147 61.2
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.3e-38 162.5 167 56.3
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.8e-37 159.5 163 49.7
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 3.0e-36 156.0 207 45.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 8.6e-31 137.9 84 72.6
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.5e-27 127.1 97 66.0
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.9e-25 120.2 169 41.4
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 7.0e-25 118.2 127 53.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 7.8e-24 114.8 162 46.3
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.3e-22 109.4 89 61.8
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 4.3e-22 109.0 193 36.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 4.0e-20 102.4 106 50.0
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 2.6e-19 99.8 138 41.3
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.3e-18 97.4 76 67.1
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 4.7e-13 79.0 65 55.4
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 3.5e-08 62.8 40 72.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.9e-06 57.0 40 65.0


User provided reference genes

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