Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 3.2e-128 461.8 245 100.0
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 1.3e-60 237.3 242 52.9
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 2.2e-60 236.5 242 53.3
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 7.0e-59 231.5 246 52.4
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 9.1e-59 231.1 249 50.6
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 5.9e-58 228.4 212 56.1
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 7.7e-58 228.0 212 56.1
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 2.3e-57 226.5 248 50.4
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 3.8e-57 225.7 242 50.0
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 1.1e-56 224.2 259 50.6
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 4.2e-56 222.2 212 54.7
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 9.5e-56 221.1 242 51.2
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 1.6e-55 220.3 240 51.7
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 2.6e-53 213.0 233 49.8
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 3.4e-53 212.6 248 49.6
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 4.4e-53 212.2 215 48.8
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 4.4e-53 212.2 243 48.6
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 2.2e-52 209.9 214 48.6
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 3.7e-52 209.1 240 49.2
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 8.3e-52 208.0 216 50.0
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 1.1e-51 207.6 236 49.2
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 1.4e-51 207.2 238 48.3
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 2.4e-51 206.5 236 48.7
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 4.1e-51 205.7 242 47.9
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 4.1e-51 205.7 238 47.1
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 7.0e-51 204.9 240 47.9
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 7.0e-51 204.9 242 46.3
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 7.0e-51 204.9 214 48.1
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 9.2e-51 204.5 238 47.9
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 9.2e-51 204.5 242 46.3
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 1.6e-50 203.8 243 44.0
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 2.0e-50 203.4 242 48.3
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 2.0e-50 203.4 242 48.3
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 4.5e-50 202.2 238 46.6
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 4.5e-50 202.2 252 45.2
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 4.5e-50 202.2 238 46.2
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 5.9e-50 201.8 236 46.6
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 1.0e-49 201.1 236 47.0
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 1.3e-49 200.7 238 46.6
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 1.7e-49 200.3 243 48.6
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 2.9e-49 199.5 243 48.6
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 2.9e-49 199.5 240 45.8
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 3.8e-49 199.1 242 47.1
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 8.6e-49 198.0 234 47.0
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 1.1e-48 197.6 217 48.8
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 1.5e-48 197.2 244 47.5
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 1.9e-48 196.8 236 47.0
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 2.5e-48 196.4 232 45.3
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 3.3e-48 196.1 241 45.6
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 3.3e-48 196.1 253 47.0
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 7.3e-48 194.9 273 43.2
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 7.3e-48 194.9 232 46.1
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 9.5e-48 194.5 232 45.7
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 9.5e-48 194.5 250 44.8
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.2e-47 194.1 243 45.7
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 2.1e-47 193.4 235 46.0
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 3.6e-47 192.6 213 47.9
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 3.6e-47 192.6 229 47.2
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 4.7e-47 192.2 214 49.5
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 4.0e-46 189.1 245 44.9
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 1.5e-45 187.2 238 44.5
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 1.5e-45 187.2 242 43.0
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 2.0e-45 186.8 237 45.1
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 1.3e-44 184.1 210 45.2
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 1.3e-44 184.1 210 45.2
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 1.3e-44 184.1 237 43.5
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 1.7e-44 183.7 239 45.2
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 2.2e-44 183.3 236 42.4
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 2.9e-44 183.0 236 43.6
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 1.4e-43 180.6 241 44.8
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.8e-43 180.3 221 45.7
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 2.4e-43 179.9 241 45.6
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 4.1e-43 179.1 242 41.3
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 9.2e-43 177.9 216 45.4
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 2.0e-42 176.8 223 43.5
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 2.7e-42 176.4 235 41.7
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 7.8e-42 174.9 190 48.4
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 1.3e-41 174.1 247 42.5
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 3.6e-39 166.0 203 45.3
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 1.1e-38 164.5 190 45.3
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 2.3e-38 163.3 229 41.9
HanXRQChr09g0255371 Helianthus annuus HOM05D006208 ORTHO05D007606 3.1e-38 162.9 209 45.5
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 8.9e-38 161.4 240 40.4
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 2.9e-36 156.4 178 47.8
Lsat_1_v5_gn_4_159701 Lactuca sativa HOM05D006208 ORTHO05D007606 1.1e-35 154.5 214 45.3
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 9.2e-35 151.4 212 41.0
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 2.0e-34 150.2 192 43.8
TAR636G0902 Trochodendron aralioides HOM05D006208 ORTHO05D007606 3.5e-34 149.4 168 47.6
CDE09G0594 Ceratophyllum demersum HOM05D002946 ORTHO05D007606 4.0e-30 136.0 171 45.6
Pp3c18_14450 Physcomitrium patens HOM05D006208 ORTHO05D007606 4.0e-30 136.0 227 34.8
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 8.9e-30 134.8 183 42.1
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 5.8e-29 132.1 185 41.6
Cpa.g.sc73.15 Carica papaya HOM05D006208 ORTHO05D007606 3.7e-28 129.4 163 42.9
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 6.0e-26 122.1 160 46.9
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 3.3e-24 116.3 142 44.4
C05p06800 Brassica napus HOM05D006208 ORTHO05D007606 2.1e-23 113.6 136 46.3
BolC5t29439H Brassica oleracea HOM05D006208 ORTHO05D007606 2.8e-23 113.2 136 46.3
Sc22g0000860 Simmondsia chinensis HOM05D006208 ORTHO05D007606 1.1e-22 111.3 110 53.6
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 3.1e-22 109.8 146 44.5
AUR62037069 Chenopodium quinoa HOM05D006208 ORTHO05D007606 1.2e-21 107.8 119 49.6
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 9.9e-21 104.8 213 29.1
Rhsim03G0045700 Rhododendron simsii HOM05D006208 ORTHO05D007606 2.4e-19 100.1 108 52.8
Aqoxy6G02519 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 3.2e-19 99.8 98 61.2
TPR.G35926 Trifolium pratense HOM05D006208 ORTHO05D007606 9.2e-19 98.2 108 50.9
SHI14855 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-18 97.4 180 33.9
FAN08G0500 Fragaria x ananassa HOM05D006208 ORTHO05D007606 5.1e-17 92.4 87 50.6
VMungo1383G2538 Vigna mungo HOM05D006208 ORTHO05D007606 1.6e-15 87.4 150 36.0
CBR_g36542 Chara braunii HOM05D006208 ORTHO05D007606 1.8e-14 84.0 218 29.4
FAN21G1425 Fragaria x ananassa HOM05D006208 ORTHO05D007606 4.0e-14 82.8 91 45.1
Mapoly0047s0023 Marchantia polymorpha HOM05D006208 ORTHO05D007606 3.4e-13 79.7 249 27.7
Aqoxy3G03625 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 2.9e-12 76.6 64 60.9
Aqoxy3G03662 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 4.9e-12 75.9 152 34.2
Peaxi162Scf00146g00108 Petunia axillaris HOM05D006208 ORTHO05D007606 1.9e-11 73.9 75 50.7
Medtr7g087170 Medicago truncatula HOM05D006208 ORTHO05D007606 2.4e-11 73.6 131 35.1
Medtr7g087330 Medicago truncatula HOM05D006208 ORTHO05D007606 7.1e-11 72.0 107 45.8
Sc22g0000880 Simmondsia chinensis HOM05D006208 ORTHO05D007606 9.3e-11 71.6 157 33.1
TPR.G15311 Trifolium pratense HOM05D006208 ORTHO05D007606 2.7e-10 70.1 86 44.2
C05p06810 Brassica napus HOM05D000200 ORTHO05D000262 4.6e-10 69.3 83 45.8
BolC5t29440H Brassica oleracea HOM05D000200 ORTHO05D000262 4.6e-10 69.3 83 45.8
Oeu054958.1 Olea europaea HOM05D006208 ORTHO05D007606 1.0e-09 68.2 84 46.4
SHI14857 Sapria himalayana HOM05D006208 ORTHO05D007606 1.3e-09 67.8 55 56.4
TPR.G7822 Trifolium pratense HOM05D006208 ORTHO05D007606 6.6e-09 65.5 203 30.0
Oeu029768.1 Olea europaea HOM05D006208 ORTHO05D007606 2.5e-08 63.5 78 41.0
Oeu029769.2 Olea europaea HOM05D006208 ORTHO05D007606 4.8e-07 59.3 74 39.2
Pp3c18_14463 Physcomitrium patens HOM05D006208 ORTHO05D007606 8.1e-07 58.5 111 32.4
SEGI_30866 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 1.4e-06 57.8 87 39.1
AagrBONN_evm.TU.Sc2ySwM_117.1480 Anthoceros agrestis HOM05D006208 ORTHO05D007606 4.0e-06 56.2 142 26.8


User provided reference genes

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