Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 2.4e-237 825.1 419 100.0
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 1.7e-142 510.0 419 65.6
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 3.0e-142 509.2 405 67.2
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 4.0e-139 498.8 409 64.5
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 2.6e-138 496.1 470 57.4
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 7.8e-135 484.6 412 61.7
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 1.3e-134 483.8 413 62.0
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 1.1e-133 480.7 416 62.5
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 7.3e-133 478.0 406 62.3
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 9.6e-133 477.6 414 61.8
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 1.6e-132 476.9 414 61.4
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 1.6e-132 476.9 414 61.1
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 4.8e-132 475.3 406 63.1
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 8.1e-132 474.6 406 62.6
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 1.1e-131 474.2 398 61.8
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 5.3e-131 471.9 412 60.2
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 5.3e-131 471.9 406 60.3
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 5.8e-130 468.4 413 60.3
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 2.9e-129 466.1 405 61.5
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 6.4e-129 464.9 411 59.1
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 8.4e-129 464.5 404 61.6
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 1.8e-126 456.8 419 58.5
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 5.1e-126 455.3 403 59.1
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.1e-123 447.6 402 59.5
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 1.4e-123 447.2 420 57.1
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 1.5e-122 443.7 450 56.4
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 2.0e-122 443.4 407 59.5
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 2.6e-122 443.0 407 59.2
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 9.9e-122 441.0 407 57.7
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 1.7e-121 440.3 409 59.2
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 2.2e-121 439.9 404 58.9
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 8.4e-121 438.0 409 57.0
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 1.1e-120 437.6 405 58.3
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 1.1e-120 437.6 408 57.8
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 1.4e-120 437.2 409 57.0
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 1.9e-120 436.8 407 56.5
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 1.9e-120 436.8 408 56.6
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.4e-120 436.4 407 56.5
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 3.2e-120 436.0 409 57.0
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.2e-120 435.6 407 56.8
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 9.3e-120 434.5 408 56.9
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 1.6e-119 433.7 399 59.4
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 2.1e-119 433.3 404 55.9
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 2.7e-119 433.0 401 58.4
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 3.5e-119 432.6 403 58.1
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 1.0e-118 431.0 406 56.4
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 1.3e-118 430.6 406 57.1
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 1.3e-118 430.6 409 55.7
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 1.8e-118 430.3 407 55.8
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 1.8e-118 430.3 406 56.4
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 3.0e-118 429.5 406 57.1
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 3.9e-118 429.1 403 58.6
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 5.1e-118 428.7 408 56.4
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 3.3e-117 426.0 406 55.4
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 7.4e-117 424.9 407 55.5
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 7.4e-117 424.9 407 55.5
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 7.4e-117 424.9 402 56.5
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 1.3e-116 424.1 402 55.7
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 1.3e-116 424.1 402 57.0
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 6.2e-116 421.8 416 56.0
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 1.1e-115 421.0 402 57.2
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 1.4e-115 420.6 397 56.7
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 1.4e-115 420.6 402 56.0
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 6.9e-115 418.3 406 56.9
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.0e-114 416.8 471 52.0
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 4.5e-114 415.6 435 53.8
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.3e-113 414.1 417 54.4
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 1.7e-113 413.7 406 54.9
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 1.7e-113 413.7 405 55.1
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 1.7e-113 413.7 420 54.0
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 3.8e-113 412.5 398 56.5
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 6.5e-113 411.8 413 54.2
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 8.4e-113 411.4 416 54.6
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 1.4e-112 410.6 397 57.4
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.5e-112 409.8 405 54.6
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 2.5e-112 409.8 406 55.7
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 4.2e-112 409.1 406 54.2
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 7.1e-112 408.3 405 54.6
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 2.7e-111 406.4 401 56.1
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 3.5e-111 406.0 402 56.0
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 1.8e-110 403.7 413 55.7
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 1.1e-109 401.0 403 55.1
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 2.5e-109 399.8 402 55.7
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 2.5e-109 399.8 413 53.0
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 3.3e-109 399.4 403 54.3
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 3.3e-109 399.4 413 50.4
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 9.7e-109 397.9 404 55.0
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 3.4e-106 389.4 401 54.9
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 4.5e-106 389.0 411 51.3
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 7.2e-104 381.7 411 55.2
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 2.7e-103 379.8 408 53.7
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 4.6e-103 379.0 411 52.6
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 1.3e-102 377.5 408 51.5
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 2.3e-102 376.7 396 55.3
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 1.7e-100 370.5 379 54.4
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 8.5e-97 358.2 471 46.3
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 8.5e-97 358.2 405 52.3
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 1.9e-96 357.1 405 51.9
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 1.9e-96 357.1 432 47.7
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 4.2e-96 355.9 405 51.1
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.4e-94 350.9 408 52.5
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 2.3e-94 350.1 403 49.6
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 9.7e-93 344.7 397 53.1
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 1.8e-91 340.5 302 59.3
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 1.7e-89 334.0 321 57.0
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 1.9e-88 330.5 324 59.9
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 8.8e-86 321.6 404 46.8
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 8.8e-86 321.6 401 45.6
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 4.8e-84 315.8 422 43.8
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.4e-83 313.5 413 45.0
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 2.0e-82 310.5 266 59.8
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 2.0e-82 310.5 362 49.4
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 3.7e-76 289.7 417 46.8
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 1.4e-75 287.7 444 41.0
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 1.8e-75 287.3 381 47.2
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 1.2e-74 284.6 424 42.9
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 7.2e-72 275.4 252 59.9
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 4.8e-68 262.7 483 37.3
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 1.4e-67 261.2 412 41.0
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.0e-66 257.3 267 47.6
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 1.2e-61 241.5 371 41.0
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 8.6e-57 225.3 166 61.4
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 2.3e-54 217.2 178 62.4
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 3.4e-53 213.4 305 44.9
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 2.9e-52 210.3 227 50.7
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 5.4e-43 179.5 155 57.4
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 2.5e-40 170.6 174 48.9
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 2.5e-40 170.6 174 50.6
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 4.7e-39 166.4 118 66.1
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 3.0e-33 147.1 311 34.4
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 1.2e-29 135.2 203 44.8
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 1.4e-27 128.3 181 47.0
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 2.4e-27 127.5 89 67.4
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 4.3e-24 116.7 125 52.8
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 8.1e-23 112.5 184 41.8
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 1.1e-16 92.0 154 34.4
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 4.3e-16 90.1 144 42.4
CDE04G2304 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 6.2e-15 86.3 169 38.5
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 2.4e-14 84.3 114 45.6
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 6.4e-12 76.3 51 72.5
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 5.4e-11 73.2 85 45.9
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 7.9e-10 69.3 65 56.9
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 7.9e-10 69.3 65 56.9
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea HOM05D004986 ORTHO05D005898 2.5e-08 64.3 105 42.9
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea HOM05D004986 ORTHO05D005898 2.5e-08 64.3 105 42.9
MCO09G766 Micromonas commoda HOM05D004986 ORTHO05D005898 2.8e-07 60.8 254 24.4


User provided reference genes

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