Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.1e-259 899.4 465 100.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 3.4e-187 658.7 477 71.9
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 4.6e-184 648.3 479 72.2
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.8e-181 639.0 474 70.9
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 5.0e-175 618.2 473 68.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 8.6e-175 617.5 459 70.4
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 8.1e-173 610.9 459 70.4
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.0e-172 608.6 482 69.5
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 1.2e-171 607.1 462 67.3
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.3e-170 603.6 462 68.6
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 3.7e-170 602.1 465 67.3
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 3.7e-170 602.1 470 67.7
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 4.9e-170 601.7 464 67.7
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 8.3e-170 600.9 469 67.2
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.5e-168 595.5 467 68.3
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 6.0e-168 594.7 461 66.6
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 7.8e-168 594.3 461 66.2
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 7.8e-168 594.3 461 66.2
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.0e-167 594.0 467 68.3
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 1.3e-167 593.6 465 66.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 3.9e-167 592.0 464 66.4
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 5.1e-167 591.7 475 65.5
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.9e-166 589.7 464 66.6
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 1.9e-166 589.7 464 66.8
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 5.6e-166 588.2 469 65.9
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-165 586.6 467 67.5
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 4.7e-165 585.1 473 66.0
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 4.0e-164 582.0 464 65.7
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 4.0e-164 582.0 465 66.2
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 6.8e-164 581.3 477 65.6
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.5e-163 580.1 461 65.9
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 2.6e-163 579.3 465 64.9
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 4.4e-163 578.6 509 61.1
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 9.9e-163 577.4 460 64.1
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 1.7e-162 576.6 455 67.3
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 8.4e-162 574.3 457 65.4
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-161 573.9 464 64.7
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.4e-161 573.5 464 65.1
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.4e-161 572.8 472 65.3
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 7.1e-161 571.2 461 63.8
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 9.2e-161 570.9 461 65.1
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.5e-160 568.9 503 63.6
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 3.5e-160 568.9 465 64.3
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.3e-159 567.0 458 65.3
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.7e-159 566.6 465 64.3
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.7e-159 566.6 465 63.7
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 2.3e-159 566.2 502 63.7
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 3.9e-159 565.5 462 63.6
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 8.6e-159 564.3 478 64.2
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 9.6e-158 560.8 454 64.5
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 1.6e-157 560.1 454 64.1
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.1e-157 559.7 454 64.3
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 2.1e-157 559.7 469 64.0
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 8.1e-157 557.8 459 62.5
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.1e-156 557.4 459 63.6
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 2.4e-156 556.2 454 64.1
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 4.0e-156 555.4 482 62.7
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 5.2e-156 555.1 462 62.8
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 6.8e-156 554.7 458 63.5
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.2e-155 553.9 492 60.8
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.2e-155 553.9 458 63.5
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 7.6e-155 551.2 462 62.3
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.4e-153 547.0 464 62.1
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 4.2e-153 545.4 458 63.1
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 7.1e-153 544.7 481 63.0
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 1.2e-152 543.9 462 61.9
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.2e-152 543.9 466 63.1
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 2.1e-152 543.1 469 61.8
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 2.7e-152 542.7 466 60.9
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.7e-152 542.7 469 61.8
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 4.6e-152 542.0 414 68.4
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 4.6e-152 542.0 466 61.6
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 7.8e-152 541.2 463 62.0
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 3.0e-151 539.3 475 59.6
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 6.6e-151 538.1 454 61.9
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 9.6e-150 534.3 477 60.2
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 9.6e-150 534.3 459 63.0
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 4.4e-147 525.4 469 60.3
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.9e-146 522.7 460 58.0
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 3.8e-146 522.3 415 65.5
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 2.3e-143 513.1 429 62.5
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.4e-140 503.8 464 58.4
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 6.9e-140 501.5 433 64.7
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.5e-139 500.4 427 62.8
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 4.9e-138 495.4 470 57.9
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.1e-137 494.2 469 57.6
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 3.5e-136 489.2 486 53.7
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 3.1e-132 476.1 376 65.7
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 5.3e-132 475.3 384 64.6
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 9.0e-132 474.6 473 54.3
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 9.0e-132 474.6 473 54.8
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 8.4e-130 468.0 320 74.1
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 3.1e-124 449.5 461 52.1
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 9.0e-124 448.0 458 54.4
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.2e-123 447.6 491 50.1
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 2.2e-122 443.4 366 65.6
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 2.0e-115 420.2 314 69.7
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.9e-113 413.7 327 65.7
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 7.2e-113 411.8 517 48.5
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.2e-112 411.0 327 66.1
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 4.7e-104 382.5 323 63.5
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 7.7e-99 365.2 328 59.1
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 3.6e-96 356.3 365 53.4
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.4e-92 344.4 350 54.6
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 7.0e-84 315.5 265 63.4
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 9.1e-84 315.1 484 39.5
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.9e-81 307.4 296 57.8
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 3.6e-80 303.1 219 70.8
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 3.8e-74 283.1 416 40.9
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 2.3e-66 257.3 342 47.7
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 5.8e-62 242.7 488 33.6
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 3.9e-50 203.4 160 69.4
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 1.4e-44 184.9 197 55.8
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 4.1e-44 183.3 484 30.6
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 2.5e-33 147.5 493 25.8
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.8e-32 144.1 126 66.7
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.4e-31 141.7 373 35.7
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 1.6e-27 128.3 143 53.1
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 5.1e-26 123.2 84 72.6
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 5.3e-23 113.2 438 25.3
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 7.1e-20 102.8 81 63.0
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 7.1e-20 102.8 81 61.7
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.2e-19 102.1 405 25.2
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.6e-19 101.7 82 64.6
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 6.2e-16 89.7 102 51.0
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 8.1e-16 89.4 100 47.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 1.6e-11 75.1 72 51.4
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 7.9e-11 72.8 72 50.0
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 4.5e-06 57.0 51 56.9


User provided reference genes

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