Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 3.0e-148 528.5 267 100.0
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 4.9e-74 282.0 233 60.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 4.5e-67 258.8 234 55.6
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 7.6e-67 258.1 217 57.6
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.4e-65 253.8 212 58.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.9e-65 253.4 214 57.9
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.4e-65 253.1 229 55.0
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.5e-65 251.9 210 57.6
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 9.3e-65 251.1 262 51.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 9.3e-65 251.1 256 52.7
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.2e-64 250.8 256 53.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 1.6e-64 250.4 264 48.9
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 2.1e-64 250.0 282 51.1
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 2.1e-64 250.0 215 56.7
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 4.6e-64 248.8 208 57.7
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 6.0e-64 248.4 234 53.4
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 6.0e-64 248.4 196 64.8
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 7.9e-64 248.1 227 55.5
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 7.9e-64 248.1 199 62.3
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.9e-64 248.1 208 58.2
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 7.9e-64 248.1 222 55.0
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.0e-63 247.7 214 56.1
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.8e-63 246.9 207 60.4
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.8e-63 246.9 242 54.1
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 2.3e-63 246.5 217 56.2
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 8.7e-63 244.6 217 56.7
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.1e-62 244.2 215 56.3
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.9e-62 243.4 223 54.7
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.3e-62 242.7 215 55.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 4.3e-62 242.3 248 50.4
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 4.3e-62 242.3 205 57.1
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 7.4e-62 241.5 259 49.4
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.3e-61 240.7 234 51.7
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.6e-61 240.4 263 50.6
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.6e-61 240.4 212 57.1
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.1e-61 240.0 258 49.2
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 3.7e-61 239.2 208 56.7
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 3.7e-61 239.2 232 53.9
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 3.7e-61 239.2 235 51.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.8e-61 238.8 275 48.7
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 4.8e-61 238.8 216 56.0
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 4.8e-61 238.8 220 56.4
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 6.2e-61 238.4 212 54.7
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 8.1e-61 238.0 215 54.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.1e-60 237.7 265 48.7
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.8e-60 236.9 260 48.5
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.4e-60 236.5 258 50.8
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.4e-60 236.5 236 50.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 2.4e-60 236.5 275 48.0
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 3.1e-60 236.1 238 52.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 6.9e-60 235.0 210 56.2
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 9.0e-60 234.6 260 48.1
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 9.0e-60 234.6 212 54.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 2.0e-59 233.4 234 51.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 3.4e-59 232.6 215 53.5
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 1.3e-58 230.7 208 54.8
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.2e-58 229.9 258 50.8
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 6.5e-58 228.4 249 50.2
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 6.5e-58 228.4 211 55.0
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.4e-57 227.3 211 55.5
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.4e-57 227.3 211 55.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 3.2e-57 226.1 208 52.9
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 5.5e-57 225.3 211 53.1
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 9.3e-57 224.6 268 44.4
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.2e-56 224.2 218 52.3
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.2e-56 224.2 262 47.3
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.6e-56 223.8 262 46.6
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.6e-56 223.8 218 53.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.0e-55 221.1 217 50.2
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.5e-54 217.2 208 52.4
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.1e-53 213.4 174 62.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.0e-51 206.8 188 54.3
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.0e-51 206.8 211 50.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.4e-51 206.1 301 43.9
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.0e-50 204.5 249 47.4
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 2.9e-50 203.0 219 47.0
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.2e-49 199.5 205 50.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 4.6e-48 195.7 240 44.6
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 3.0e-47 193.0 191 55.0
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.9e-46 190.3 170 56.5
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.8e-44 183.7 274 40.5
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 3.1e-44 183.0 209 47.4
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.9e-42 176.4 204 46.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.9e-41 173.7 147 58.5
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.2e-41 172.9 181 50.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 9.4e-41 171.4 203 46.3
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 1.2e-40 171.0 191 47.6
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.3e-37 161.0 146 52.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 3.7e-37 159.5 195 46.7
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.7e-34 150.6 109 61.5
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 5.5e-33 145.6 229 36.7
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.7e-29 134.0 105 59.0
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.9e-27 125.6 175 45.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 6.5e-26 122.1 218 33.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 8.5e-26 121.7 152 43.4
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.2e-24 117.9 172 38.4
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.5e-19 99.4 84 56.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.5e-17 92.4 104 48.1
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.8e-15 87.4 102 45.1
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 5.7e-14 82.4 219 28.3
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 7.5e-14 82.0 213 31.9
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.1e-12 78.2 93 38.7
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.5e-09 67.8 81 48.1
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 5.7e-06 55.8 48 56.2


User provided reference genes

Program Settings