Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.6e-112 409.5 204 100.0
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 1.5e-59 233.4 216 62.0
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.9e-58 228.4 208 58.7
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 4.2e-57 225.3 205 59.5
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 7.1e-57 224.6 211 57.3
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 7.9e-56 221.1 218 58.3
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 3.0e-55 219.2 208 56.7
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.6e-53 213.4 215 57.7
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 1.6e-53 213.4 203 56.2
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 2.8e-53 212.6 210 55.7
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 3.7e-53 212.2 214 52.8
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 2.4e-52 209.5 198 58.6
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 6.9e-52 208.0 184 60.9
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 1.5e-51 206.8 216 53.2
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.0e-51 206.5 200 57.0
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.6e-51 206.1 212 53.8
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.0e-50 204.1 221 56.6
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.7e-50 203.4 205 58.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 2.2e-50 203.0 194 56.2
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.9e-50 201.8 211 53.6
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 1.1e-49 200.7 216 52.3
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 3.2e-49 199.1 211 54.0
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 9.3e-49 197.6 223 51.6
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 9.3e-49 197.6 217 53.5
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.7e-48 196.1 214 52.3
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 1.0e-47 194.1 126 69.8
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 1.3e-47 193.7 209 50.2
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.3e-47 193.7 206 53.4
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 3.0e-47 192.6 217 53.0
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 5.1e-47 191.8 208 51.9
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 5.1e-47 191.8 204 53.4
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 6.7e-47 191.4 138 68.1
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 6.7e-47 191.4 138 68.1
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.5e-46 189.5 202 52.0
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 2.5e-46 189.5 149 65.1
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 2.5e-46 189.5 206 53.4
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 4.3e-46 188.7 194 52.6
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 5.7e-46 188.3 194 52.6
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 1.3e-45 187.2 194 52.1
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.6e-45 186.8 233 49.4
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 2.1e-45 186.4 125 71.2
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 3.7e-45 185.7 136 65.4
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 8.2e-45 184.5 174 53.4
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 8.2e-45 184.5 174 53.4
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 8.2e-45 184.5 99 81.8
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 1.1e-44 184.1 172 55.8
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 2.4e-44 183.0 180 58.3
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 3.1e-44 182.6 170 55.3
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 3.1e-44 182.6 174 54.6
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 4.1e-44 182.2 170 54.1
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 5.3e-44 181.8 124 71.8
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 6.9e-44 181.4 132 65.9
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 9.0e-44 181.0 182 57.1
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 9.0e-44 181.0 182 54.4
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 1.2e-43 180.6 123 74.0
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.5e-43 180.3 184 54.9
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 2.6e-43 179.5 171 54.4
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.6e-43 179.5 205 51.2
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 5.9e-43 178.3 208 55.3
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 5.9e-43 178.3 201 53.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 5.9e-43 178.3 163 53.4
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 7.6e-43 177.9 125 70.4
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 7.6e-43 177.9 100 78.0
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 1.0e-42 177.6 194 50.0
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.0e-42 177.6 196 50.0
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.0e-42 177.6 119 73.1
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.0e-42 177.6 210 51.9
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.0e-42 177.6 213 51.2
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 1.3e-42 177.2 194 49.5
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 1.3e-42 177.2 126 69.0
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 2.2e-42 176.4 194 50.0
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 3.8e-42 175.6 119 70.6
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 5.0e-42 175.3 119 71.4
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 6.5e-42 174.9 119 71.4
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 6.5e-42 174.9 111 71.2
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 8.5e-42 174.5 189 53.4
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 2.5e-41 172.9 127 66.9
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 2.5e-41 172.9 122 69.7
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 4.2e-41 172.2 118 71.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.6e-40 170.2 197 52.3
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 1.6e-40 170.2 214 50.0
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 3.6e-40 169.1 122 68.0
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 6.1e-40 168.3 174 54.6
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 3.0e-39 166.0 123 65.9
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 5.7e-38 161.8 171 50.9
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 5.7e-38 161.8 127 62.2
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 1.3e-37 160.6 139 59.0
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.4e-35 152.5 103 67.0
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 5.9e-35 151.8 102 66.7
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 1.3e-34 150.6 120 62.5
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.7e-34 150.2 102 66.7
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.7e-34 150.2 202 41.1
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.1e-33 147.5 167 50.9
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 9.4e-33 144.4 112 64.3
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.0e-31 141.0 75 81.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 3.9e-31 139.0 89 65.2
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.1e-30 137.5 89 70.8
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.8e-29 132.9 165 49.1
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.4e-28 130.6 164 50.0
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.4e-28 129.8 119 50.4
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.2e-24 117.5 105 46.7
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 3.0e-23 112.8 222 40.5
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 3.3e-22 109.4 139 42.4
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.3e-21 107.5 139 41.0
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 2.2e-21 106.7 128 50.8
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 4.8e-21 105.5 87 51.7
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 1.4e-20 104.0 124 45.2
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 5.0e-18 95.5 67 68.7
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.5e-17 94.0 138 46.4
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.9e-17 93.6 74 62.2
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 2.1e-16 90.1 141 40.4
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 8.0e-16 88.2 136 46.3
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 9.1e-12 74.7 72 55.6
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.2e-10 70.1 110 40.0
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 7.5e-06 55.1 59 50.8


User provided reference genes

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