Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01297 Aquilegia oxysepala HOM05D002037 ORTHO05D005586 1.3e-58 229.6 119 100.0
Aqoxy5G02379 Aquilegia oxysepala HOM05D002037 ORTHO05D005586 1.3e-50 203.0 121 88.4
unitig_8.g3509 Utricularia gibba HOM05D002037 ORTHO05D005586 1.1e-46 189.9 121 79.3
Phvul.009G099600 Phaseolus vulgaris HOM05D002037 ORTHO05D005586 1.5e-46 189.5 121 82.6
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 1.9e-46 189.1 121 82.6
Eucgr.C02143 Eucalyptus grandis HOM05D002037 ORTHO05D005586 2.5e-46 188.7 121 81.8
SalBow6G1621 Salvia bowleyana HOM05D002037 ORTHO05D005586 4.3e-46 188.0 123 78.0
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.3e-46 188.0 123 78.0
CAN.G135.28 Capsicum annuum HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 79.3
AUR62004328 Chenopodium quinoa HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 79.3
AUR62033316 Chenopodium quinoa HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 79.3
AUR62033343 Chenopodium quinoa HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 79.3
DCAR_020609 Daucus carota HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 80.2
Lj1g0005088 Lotus japonicus HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 81.8
Nitab4.5_0006112g0010 Nicotiana tabacum HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 80.2
Solyc11g005620.1 Solanum lycopersicum HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 78.5
Sopen11g001580 Solanum pennellii HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 78.5
PGSC0003DMG400003981 Solanum tuberosum HOM05D002037 ORTHO05D005586 5.6e-46 187.6 121 78.5
PSO063G5534 Papaver somniferum HOM05D002037 ORTHO05D005586 7.3e-46 187.2 121 80.2
TAR636G3119 Trochodendron aralioides HOM05D002037 ORTHO05D005586 7.3e-46 187.2 121 80.2
A09p50430 Brassica napus HOM05D002037 ORTHO05D005586 9.6e-46 186.8 121 79.3
BraA09t40494Z Brassica rapa HOM05D002037 ORTHO05D005586 9.6e-46 186.8 121 79.3
COL.COLO4_15466 Corchorus olitorius HOM05D002037 ORTHO05D005586 2.1e-45 185.7 121 78.5
Nitab4.5_0000320g0090 Nicotiana tabacum HOM05D002037 ORTHO05D005586 2.1e-45 185.7 121 79.3
BcaC07g40389 Brassica carinata HOM05D002037 ORTHO05D005586 2.8e-45 185.3 121 78.5
Migut.H01099 Erythranthe guttata HOM05D002037 ORTHO05D005586 2.8e-45 185.3 121 78.5
Lj8A3T12 Lonicera japonica HOM05D002037 ORTHO05D005586 2.8e-45 185.3 121 78.5
Peaxi162Scf00896g00012 Petunia axillaris HOM05D002037 ORTHO05D005586 2.8e-45 185.3 121 77.7
Sed0016385 Sechium edule HOM05D002037 ORTHO05D005586 2.8e-45 185.3 121 79.3
Peaxi162Scf00178g00004 Petunia axillaris HOM05D002037 ORTHO05D005586 3.6e-45 184.9 121 77.7
Rhsim07G0172400 Rhododendron simsii HOM05D002037 ORTHO05D005586 3.6e-45 184.9 121 78.5
Rhsim07G0173100 Rhododendron simsii HOM05D002037 ORTHO05D005586 3.6e-45 184.9 121 78.5
RhsimUnG0016600 Rhododendron simsii HOM05D002037 ORTHO05D005586 3.6e-45 184.9 121 78.5
HPP92_022465 Vanilla planifolia HOM05D002037 ORTHO05D005586 3.6e-45 184.9 121 77.7
Glyma.06G074900 Glycine max HOM05D002037 ORTHO05D005586 4.8e-45 184.5 121 80.2
Sed0022277 Sechium edule HOM05D002037 ORTHO05D005586 4.8e-45 184.5 121 78.5
Actinidia03569 Actinidia chinensis HOM05D002037 ORTHO05D005586 6.2e-45 184.1 121 77.7
Carub.0005s2440 Capsella rubella HOM05D002037 ORTHO05D005586 6.2e-45 184.1 121 77.7
Cpa.g.sc6.178 Carica papaya HOM05D002037 ORTHO05D005586 8.1e-45 183.7 121 76.9
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 8.1e-45 183.7 121 78.5
Nn1g00932 Nelumbo nucifera HOM05D002037 ORTHO05D005586 8.1e-45 183.7 120 76.7
Glyma.04G073800 Glycine max HOM05D002037 ORTHO05D005586 1.4e-44 183.0 121 79.3
Gohir.D13G122400 Gossypium hirsutum HOM05D002037 ORTHO05D005586 1.4e-44 183.0 121 77.7
Manes.10G056500 Manihot esculenta HOM05D002037 ORTHO05D005586 1.8e-44 182.6 121 78.5
PGR102G0041 Punica granatum HOM05D002037 ORTHO05D005586 1.8e-44 182.6 121 78.5
Thecc.08G172900 Theobroma cacao HOM05D002037 ORTHO05D005586 1.8e-44 182.6 121 77.7
Actinidia14156 Actinidia chinensis HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 76.9
AL5G39140 Arabidopsis lyrata HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 76.9
ClCG08G012830 Citrullus lanatus HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 77.7
MELO3C011208.2 Cucumis melo HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 77.7
CsaV3_2G031570 Cucumis sativus L. HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 77.7
Gorai.013G137200 Gossypium raimondii HOM05D002037 ORTHO05D005586 2.4e-44 182.2 121 77.7
AT3G57560 Arabidopsis thaliana HOM05D002037 ORTHO05D005586 3.1e-44 181.8 121 76.0
Ciclev10008739m.g Citrus clementina HOM05D002037 ORTHO05D005586 3.1e-44 181.8 121 77.7
Dinv09453 Davidia involucrata HOM05D002037 ORTHO05D005586 3.1e-44 181.8 120 76.7
Lalb_Chr23g0268941 Lupinus albus HOM05D002037 ORTHO05D005586 3.1e-44 181.8 121 79.3
Medtr3g108460 Medicago truncatula HOM05D002037 ORTHO05D005586 3.1e-44 181.8 121 77.7
MSTRG.23424 Avicennia marina HOM05D002037 ORTHO05D005586 4.0e-44 181.4 121 76.9
CARHR167790 Cardamine hirsuta HOM05D002037 ORTHO05D005586 5.3e-44 181.0 121 76.9
Thhalv10006042m.g Eutrema salsugineum HOM05D002037 ORTHO05D005586 6.9e-44 180.6 121 76.9
Gohir.A13G118600 Gossypium hirsutum HOM05D002037 ORTHO05D005586 6.9e-44 180.6 121 76.9
Oeu048127.1 Olea europaea HOM05D002037 ORTHO05D005586 6.9e-44 180.6 121 77.7
GSVIVG01035586001 Vitis vinifera HOM05D002037 ORTHO05D005586 6.9e-44 180.6 121 77.7
Ah.05g177540 Amaranthus hybridus HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 74.4
BcaC02g09949 Brassica carinata HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
A04p03050 Brassica napus HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
C04p34850 Brassica napus HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
BolC4t25037H Brassica oleracea HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
BraA04t16028Z Brassica rapa HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
CSS0019677 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 75.2
Oeu019002.1 Olea europaea HOM05D002037 ORTHO05D005586 1.2e-43 179.9 119 78.2
Sp5g05030 Schrenkiella parvula HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.0
THA.LOC104802261 Tarenaya hassleriana HOM05D002037 ORTHO05D005586 1.2e-43 179.9 121 76.9
Aa31sc1187G30 Aethionema arabicum HOM05D002037 ORTHO05D005586 1.5e-43 179.5 121 76.0
Aa31sc992G40 Aethionema arabicum HOM05D002037 ORTHO05D005586 1.5e-43 179.5 121 76.0
Haze_05098 Corylus avellana HOM05D002037 ORTHO05D005586 1.5e-43 179.5 119 79.8
Sc23g0004800 Simmondsia chinensis HOM05D002037 ORTHO05D005586 1.5e-43 179.5 121 76.9
Ah.05g177530 Amaranthus hybridus HOM05D002037 ORTHO05D005586 2.0e-43 179.1 121 73.6
BcaC07g40367 Brassica carinata HOM05D002037 ORTHO05D005586 2.0e-43 179.1 121 76.0
C08p33110 Brassica napus HOM05D002037 ORTHO05D005586 2.0e-43 179.1 121 76.0
BolC8t50911H Brassica oleracea HOM05D002037 ORTHO05D005586 2.0e-43 179.1 121 76.0
Prupe.1G463900 Prunus persica HOM05D002037 ORTHO05D005586 2.0e-43 179.1 121 76.9
BcaB02g08309 Brassica carinata HOM05D002037 ORTHO05D005586 2.6e-43 178.7 121 76.0
Cfa013231 Carpinus fangiana HOM05D002037 ORTHO05D005586 2.6e-43 178.7 119 79.0
Duzib177G0635 Durio zibethinus HOM05D002037 ORTHO05D005586 2.6e-43 178.7 121 75.2
Rhsim01G0105900 Rhododendron simsii HOM05D002037 ORTHO05D005586 2.6e-43 178.7 121 75.2
CANSAT25G2792 Cannabis sativa HOM05D002037 ORTHO05D005586 3.4e-43 178.3 119 77.3
MD08G1134500 Malus domestica HOM05D002037 ORTHO05D005586 3.4e-43 178.3 121 76.0
Manes.07G077700 Manihot esculenta HOM05D002037 ORTHO05D005586 3.4e-43 178.3 121 76.9
ECA248G2210 Erigeron canadensis HOM05D002037 ORTHO05D005586 4.5e-43 177.9 121 72.7
TWI14G0248 Tripterygium wilfordii HOM05D002037 ORTHO05D005586 4.5e-43 177.9 121 76.0
vmacro20743 Vaccinium macrocarpon HOM05D002037 ORTHO05D005586 4.5e-43 177.9 121 74.4
ECA234G1135 Erigeron canadensis HOM05D002037 ORTHO05D005586 5.8e-43 177.6 120 72.5
Migut.F01615 Erythranthe guttata HOM05D002037 ORTHO05D005586 5.8e-43 177.6 121 75.2
SEGI_35978 Sequoiadendron giganteum HOM05D002037 ORTHO05D005586 5.8e-43 177.6 121 73.6
TPR.G12308 Trifolium pratense HOM05D002037 ORTHO05D005586 5.8e-43 177.6 121 76.0
Atru.chr7.2707 Acer truncatum HOM05D002037 ORTHO05D005586 7.6e-43 177.2 121 76.0
Haze_21661 Corylus avellana HOM05D002037 ORTHO05D005586 7.6e-43 177.2 119 79.0
SEGI_19958 Sequoiadendron giganteum HOM05D002037 ORTHO05D005586 7.6e-43 177.2 120 73.3
FAN24G2569 Fragaria x ananassa HOM05D002037 ORTHO05D005586 9.9e-43 176.8 121 75.2
FAN27G1718 Fragaria x ananassa HOM05D002037 ORTHO05D005586 9.9e-43 176.8 121 75.2
Hma1.2p1_1382F.1_g279370 Hydrangea macrophylla HOM05D002037 ORTHO05D005586 9.9e-43 176.8 121 74.4
RcHm_v2.0_Chr6g0312541 Rosa chinensis HOM05D002037 ORTHO05D005586 9.9e-43 176.8 121 75.2
CiPaw.07G216400 Carya illinoinensis HOM05D002037 ORTHO05D005586 1.3e-42 176.4 120 77.5
FvH4_2g30500 Fragaria vesca HOM05D002037 ORTHO05D005586 1.3e-42 176.4 121 75.2
FAN20G1771 Fragaria x ananassa HOM05D002037 ORTHO05D005586 1.3e-42 176.4 121 76.0
MSTRG.2681 Avicennia marina HOM05D002037 ORTHO05D005586 4.9e-42 174.5 121 73.6
Os02g0657600 Oryza sativa ssp. japonica HOM05D002037 ORTHO05D005586 4.9e-42 174.5 121 73.6
Lsat_1_v5_gn_5_164581 Lactuca sativa HOM05D002037 ORTHO05D005586 6.4e-42 174.1 119 71.4
Potri.006G280100 Populus trichocarpa HOM05D002037 ORTHO05D005586 8.4e-42 173.7 121 72.7
Os04g0550500 Oryza sativa ssp. japonica HOM05D002037 ORTHO05D005586 1.1e-41 173.3 121 72.7
Potri.018G001600 Populus trichocarpa HOM05D002037 ORTHO05D005586 1.1e-41 173.3 121 72.7
QL12p030933 Quercus lobata HOM05D002037 ORTHO05D005586 1.1e-41 173.3 120 74.2
Psat5g026120 Pisum sativum HOM05D002037 ORTHO05D005586 3.2e-41 171.8 121 74.4
Zm00001eb074610 Zea mays HOM05D002037 ORTHO05D005586 4.2e-41 171.4 121 71.9
ATR0782G017 Amborella trichopoda HOM05D002037 ORTHO05D005586 2.1e-40 169.1 121 68.6
Zm00001eb186530 Zea mays HOM05D002037 ORTHO05D005586 2.1e-40 169.1 121 69.4
Duzib116G0244 Durio zibethinus HOM05D002037 ORTHO05D005586 4.6e-40 167.9 121 69.4
HanXRQChr10g0278011 Helianthus annuus HOM05D002037 ORTHO05D005586 6.0e-40 167.5 121 68.6
Cc07_g17450 Coffea canephora HOM05D002037 ORTHO05D005586 5.1e-39 164.5 121 66.9
Hma1.2p1_2176F.1_g316120 Hydrangea macrophylla HOM05D002037 ORTHO05D005586 8.7e-39 163.7 113 72.6
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 1.1e-38 163.3 115 71.3
Hma1.2p1_0319F.1_g123860 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 5.6e-38 161.0 107 72.9
SHI12423 Sapria himalayana HOM05D002037 ORTHO05D005586 5.6e-38 161.0 120 67.5
Cc07_g16850 Coffea canephora HOM05D002037 ORTHO05D005586 1.1e-36 156.8 121 67.8
Sc23g0004670 Simmondsia chinensis HOM05D002037 ORTHO05D005586 3.1e-36 155.2 121 69.4
AagrBONN_evm.TU.Sc2ySwM_344.3516 Anthoceros agrestis HOM05D002037 ORTHO05D005586 6.9e-36 154.1 121 62.0
Pp3c4_8600 Physcomitrium patens HOM05D002037 ORTHO05D005586 6.9e-36 154.1 123 61.8
SMO364G0053 Selaginella moellendorffii HOM05D002037 ORTHO05D005586 6.9e-36 154.1 121 66.1
HanXRQChr10g0278111 Helianthus annuus HOM05D002037 ORTHO05D005586 9.0e-36 153.7 121 64.5
HanXRQChr11g0330611 Helianthus annuus HOM05D002037 ORTHO05D005586 9.0e-36 153.7 121 64.5
Mapoly0031s0070 Marchantia polymorpha HOM05D002037 ORTHO05D005586 2.9e-34 148.7 121 63.6
SGA_v2.0_scaffold231G43409 Striga asiatica HOM05D002037 ORTHO05D005586 4.9e-34 147.9 97 79.4
MCO12G331 Micromonas commoda HOM05D002037 ORTHO05D005586 1.6e-32 142.9 121 57.9
Cre01.g015000 Chlamydomonas reinhardtii HOM05D002037 ORTHO05D005586 6.0e-32 141.0 121 55.4
CBR_g84854 Chara braunii HOM05D002037 ORTHO05D005586 3.0e-31 138.7 118 58.5
CBR_g38963 Chara braunii HOM05D002037 ORTHO05D005586 9.6e-30 133.7 119 55.5
CAN.G506.1 Capsicum annuum HOM05D002037 ORTHO05D005586 5.0e-26 121.3 121 56.2
Sc23g0004440 Simmondsia chinensis HOM05D002037 ORTHO05D005586 6.5e-26 120.9 80 72.5
PRCOL_00003640 Prasinoderma coloniale HOM05D002037 ORTHO05D005586 6.1e-24 114.4 112 51.8
Hund19379 Selenicereus undatus HOM05D002037 ORTHO05D005586 3.3e-22 108.6 79 67.1
Sc23g0004780 Simmondsia chinensis HOM05D002037 ORTHO05D005586 1.3e-21 106.7 77 66.2
Haze_27393 Corylus avellana HOM05D002037 ORTHO05D005586 1.4e-20 103.2 109 45.0
Sc23g0004740 Simmondsia chinensis HOM05D002037 ORTHO05D005586 2.4e-12 75.9 58 65.5
HanXRQChr15g0492511 Helianthus annuus HOM05D002037 ORTHO05D005586 1.3e-10 70.1 57 61.4
Oeu054666.1 Olea europaea HOM05D002037 ORTHO05D005586 9.4e-09 63.9 63 58.7
Cc00_g30070 Coffea canephora HOM05D002037 ORTHO05D005586 8.8e-07 57.4 42 71.4


User provided reference genes

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