Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 0.0e+00 1477.2 727 100.0
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 6.0e-74 283.1 804 31.1
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 6.9e-62 243.0 798 30.6
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.1e-46 192.6 511 33.5
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 3.8e-44 184.1 506 31.2
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 1.9e-43 181.8 530 30.2
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 4.2e-43 180.6 776 27.1
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 4.2e-43 180.6 538 29.9
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 1.2e-42 179.1 516 31.0
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 1.6e-42 178.7 780 28.1
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 3.9e-41 174.1 625 28.6
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 5.1e-41 173.7 426 32.9
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 3.3e-40 171.0 511 29.2
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 7.4e-40 169.9 545 30.6
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 1.7e-39 168.7 545 31.6
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 1.4e-38 165.6 530 28.7
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 1.4e-38 165.6 390 32.1
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 3.1e-38 164.5 543 28.0
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 3.1e-38 164.5 499 27.9
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 6.9e-38 163.3 505 30.3
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 1.5e-37 162.2 500 29.4
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 3.4e-37 161.0 399 32.1
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 4.5e-37 160.6 516 29.5
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 7.7e-37 159.8 496 30.6
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 1.3e-36 159.1 754 26.3
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 3.8e-36 157.5 365 31.5
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 2.5e-35 154.8 757 25.6
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 7.2e-35 153.3 645 27.3
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 3.6e-34 151.0 433 30.5
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 1.0e-33 149.4 568 29.2
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 3.9e-33 147.5 748 25.9
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 5.1e-33 147.1 501 29.3
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 5.7e-32 143.7 567 26.5
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 8.2e-31 139.8 362 31.2
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 1.8e-30 138.7 409 30.8
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 2.4e-30 138.3 376 31.9
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 4.1e-30 137.5 533 27.8
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 3.5e-29 134.4 517 28.8
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 5.9e-29 133.7 362 30.7
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 2.2e-28 131.7 483 28.0
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 1.1e-27 129.4 366 29.8
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 1.5e-27 129.0 403 30.0
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 2.5e-27 128.3 496 27.0
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 9.4e-27 126.3 555 26.3
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 9.4e-27 126.3 508 25.4
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 6.1e-26 123.6 533 27.2
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 1.0e-25 122.9 619 25.2
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 2.3e-25 121.7 384 29.2
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 5.2e-25 120.6 397 27.2
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 8.8e-25 119.8 518 26.4
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.5e-24 119.0 419 27.4
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 2.6e-24 118.2 371 28.8
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 7.5e-24 116.7 401 26.7
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 9.7e-24 116.3 399 29.1
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.7e-23 115.5 300 29.3
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 2.2e-23 115.2 392 28.1
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 2.2e-23 115.2 528 27.5
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 2.2e-23 115.2 477 26.2
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 3.7e-23 114.4 477 26.2
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 4.8e-23 114.0 363 29.2
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 6.3e-23 113.6 783 24.4
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 8.2e-23 113.2 403 28.5
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.4e-22 112.5 217 32.7
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 1.8e-22 112.1 452 27.4
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 2.4e-22 111.7 324 28.7
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 2.4e-22 111.7 481 26.4
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 4.1e-22 110.9 328 29.3
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 5.3e-22 110.5 358 29.1
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 1.6e-21 109.0 428 27.1
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 2.7e-21 108.2 526 27.8
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 3.5e-21 107.8 406 28.3
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.0e-20 106.3 361 29.6
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 1.7e-20 105.5 426 28.2
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 3.2e-19 101.3 434 25.1
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 3.2e-19 101.3 377 27.1
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 7.2e-19 100.1 460 26.1
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 9.4e-19 99.8 328 27.4
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 1.2e-18 99.4 310 27.4
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.2e-18 99.4 283 30.0
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 2.7e-18 98.2 285 27.4
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 2.7e-18 98.2 229 34.5
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 3.6e-18 97.8 229 30.1
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 4.7e-18 97.4 406 26.4
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 4.7e-18 97.4 525 24.2
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 3.0e-17 94.7 429 28.2
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 1.5e-16 92.4 379 27.7
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 2.8e-15 88.2 202 32.7
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 4.8e-15 87.4 390 24.4
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 1.8e-14 85.5 315 28.3
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 2.0e-13 82.0 202 33.2
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 2.7e-13 81.6 340 26.2
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 2.2e-12 78.6 285 28.4
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 2.2e-12 78.6 285 28.4
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 2.2e-12 78.6 285 28.4
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 2.2e-12 78.6 291 26.8
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 2.2e-12 78.6 478 23.6
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 3.8e-12 77.8 250 26.8
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 5.0e-12 77.4 213 31.5
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 5.0e-12 77.4 229 29.7
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 5.0e-12 77.4 301 29.2
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 2.5e-11 75.1 298 28.5
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 1.2e-10 72.8 327 27.2
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 2.7e-10 71.6 228 28.5
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 2.7e-10 71.6 217 30.4
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.7e-10 71.6 289 27.3
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.4e-09 69.3 206 29.1
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.4e-09 69.3 206 29.1
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 1.4e-09 69.3 219 28.8
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 1.8e-09 68.9 207 30.4
CDE04G2987 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.8e-09 68.9 184 32.6
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 4.0e-09 67.8 289 27.0
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 5.2e-09 67.4 207 30.0
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 5.2e-09 67.4 207 30.0
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 5.2e-09 67.4 104 39.4
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 1.2e-08 66.2 208 30.3
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 2.0e-08 65.5 169 32.0
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 4.4e-08 64.3 311 25.4
Os01g0687300 Oryza sativa ssp. japonica HOM05D024721 ORTHO05D025980 5.7e-08 63.9 339 23.3
BcaC02g07919 Brassica carinata HOM05D008776 ORTHO05D005587 2.2e-07 62.0 75 42.7
SEGI_13389 Sequoiadendron giganteum HOM05D007001 ORTHO05D005587 2.8e-07 61.6 105 35.2
Carub.0007s0575 Capsella rubella HOM05D008776 ORTHO05D005587 1.1e-06 59.7 213 28.6
HPP92_020281 Vanilla planifolia HOM05D007001 ORTHO05D005587 1.4e-06 59.3 69 37.7


User provided reference genes

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