Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01157 Aquilegia oxysepala HOM05D003805 ORTHO05D004300 3.1e-60 235.0 119 100.0
TWI09G1369 Tripterygium wilfordii HOM05D003805 ORTHO05D004300 6.5e-18 94.4 113 46.9
Nn5g29663 Nelumbo nucifera HOM05D003805 ORTHO05D004300 5.7e-14 81.3 113 45.1
Hma1.2p1_1297F.1_g274110 Hydrangea macrophylla HOM05D003805 ORTHO05D004300 2.4e-12 75.9 115 43.5
Duzib264G0487 Durio zibethinus HOM05D003805 ORTHO05D004300 3.1e-12 75.5 123 39.0
Thecc.01G031800 Theobroma cacao HOM05D003805 ORTHO05D004300 3.1e-12 75.5 127 44.1
Gohir.D12G063500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 6.9e-12 74.3 128 35.9
Gorai.008G066800 Gossypium raimondii HOM05D003805 ORTHO05D004300 6.9e-12 74.3 128 35.9
Oeu035340.1 Olea europaea HOM05D003805 ORTHO05D004300 2.6e-11 72.4 114 42.1
CSS0002171 Camellia sinensis var. sinensis HOM05D003805 ORTHO05D004300 3.4e-11 72.0 106 43.4
MELO3C007840.2 Cucumis melo HOM05D003805 ORTHO05D004300 3.4e-11 72.0 114 37.7
Nn1g04930 Nelumbo nucifera HOM05D003805 ORTHO05D004300 4.5e-11 71.6 59 62.7
COL.COLO4_22043 Corchorus olitorius HOM05D003805 ORTHO05D004300 5.9e-11 71.2 121 38.0
Gorai.007G201700 Gossypium raimondii HOM05D003805 ORTHO05D004300 5.9e-11 71.2 124 38.7
Duzib147G0407 Durio zibethinus HOM05D003805 ORTHO05D004300 1.0e-10 70.5 124 36.3
Gohir.A11G183100 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.0e-10 70.5 120 38.3
QL06p047086 Quercus lobata HOM05D003805 ORTHO05D004300 1.0e-10 70.5 110 43.6
THA.LOC104819775 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 1.7e-10 69.7 122 39.3
Gohir.A12G063700 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.2e-10 69.3 128 34.4
Gohir.D11G189500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.2e-10 69.3 124 37.9
Lsat_1_v5_gn_2_77300 Lactuca sativa HOM05D003805 ORTHO05D004300 2.9e-10 68.9 123 40.7
TAR247G0001 Trochodendron aralioides HOM05D003805 ORTHO05D004300 2.9e-10 68.9 100 42.0
Haze_15065 Corylus avellana HOM05D000625 ORTHO05D010258 6.5e-10 67.8 120 41.7
PGR119G0937 Punica granatum HOM05D003805 ORTHO05D004300 8.5e-10 67.4 116 37.9
AUR62004083 Chenopodium quinoa HOM05D000625 ORTHO05D000467 1.1e-09 67.0 103 43.7
DCAR_016030 Daucus carota HOM05D003805 ORTHO05D004300 1.1e-09 67.0 127 39.4
GSVIVG01018926001 Vitis vinifera HOM05D003805 ORTHO05D004300 1.1e-09 67.0 113 37.2
HanXRQChr07g0191651 Helianthus annuus HOM05D003805 ORTHO05D004300 1.4e-09 66.6 120 40.0
THA.LOC104807465 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 1.4e-09 66.6 118 42.4
Sp7g34150 Schrenkiella parvula HOM05D003805 ORTHO05D004300 2.5e-09 65.9 116 37.9
SalBow8G4897 Salvia bowleyana HOM05D003805 ORTHO05D004300 3.2e-09 65.5 111 37.8
Thhalv10023197m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 4.2e-09 65.1 74 52.7
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 7.2e-09 64.3 106 41.5
Manes.02G096100 Manihot esculenta HOM05D003805 ORTHO05D004300 9.4e-09 63.9 105 40.0
Sp1g22390 Schrenkiella parvula HOM05D003805 ORTHO05D004300 9.4e-09 63.9 74 51.4
Lj2g0025508 Lotus japonicus HOM05D003805 ORTHO05D004300 1.2e-08 63.5 64 53.1
BraA08t34177Z Brassica rapa HOM05D003805 ORTHO05D004300 1.6e-08 63.2 119 34.5
Carub.0003s3237 Capsella rubella HOM05D003805 ORTHO05D004300 1.6e-08 63.2 116 38.8
CsaV3_6G046430 Cucumis sativus L. HOM05D003805 ORTHO05D004300 1.6e-08 63.2 108 36.1
Sed0017680 Sechium edule HOM05D003805 ORTHO05D004300 1.6e-08 63.2 112 37.5
Sc16g0002610 Simmondsia chinensis HOM05D003805 ORTHO05D004300 1.6e-08 63.2 121 39.7
BcaNung05311 Brassica carinata HOM05D003805 ORTHO05D004300 2.1e-08 62.8 116 37.1
A08p22170 Brassica napus HOM05D003805 ORTHO05D004300 2.1e-08 62.8 119 34.5
HanXRQChr14g0440581 Helianthus annuus HOM05D003805 ORTHO05D004300 2.1e-08 62.8 123 39.8
TPR.G24102 Trifolium pratense HOM05D003805 ORTHO05D004300 2.1e-08 62.8 98 39.8
AL3G51440 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 2.7e-08 62.4 116 38.8
CARHR244820 Cardamine hirsuta HOM05D003805 ORTHO05D004300 2.7e-08 62.4 119 34.5
TPR.G2362 Trifolium pratense HOM05D003805 ORTHO05D004300 2.7e-08 62.4 85 42.4
AL7G14560 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 3.6e-08 62.0 119 35.3
AT4G36500 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 3.6e-08 62.0 119 35.3
BcaNung00729 Brassica carinata HOM05D003805 ORTHO05D004300 3.6e-08 62.0 116 37.1
A03p64280 Brassica napus HOM05D003805 ORTHO05D004300 3.6e-08 62.0 119 34.5
C01p02580 Brassica napus HOM05D003805 ORTHO05D004300 3.6e-08 62.0 116 37.1
BolC1t00246H Brassica oleracea HOM05D003805 ORTHO05D004300 3.6e-08 62.0 116 37.1
BraA03t15498Z Brassica rapa HOM05D003805 ORTHO05D004300 3.6e-08 62.0 119 34.5
Ca_22293_v3 Cicer arietinum L. HOM05D003805 ORTHO05D004300 3.6e-08 62.0 112 38.4
Sc03g0003120 Simmondsia chinensis HOM05D003805 ORTHO05D004300 3.6e-08 62.0 76 38.2
C07p61730 Brassica napus HOM05D003805 ORTHO05D004300 4.7e-08 61.6 119 34.5
BolC7t46598H Brassica oleracea HOM05D003805 ORTHO05D004300 4.7e-08 61.6 119 34.5
Carub.0003s3236 Capsella rubella HOM05D003805 ORTHO05D004300 4.7e-08 61.6 116 38.8
Glyma.01G172100 Glycine max HOM05D003805 ORTHO05D004300 4.7e-08 61.6 64 50.0
Glyma.11G071100 Glycine max HOM05D003805 ORTHO05D004300 4.7e-08 61.6 64 50.0
A01p02370 Brassica napus HOM05D003805 ORTHO05D004300 6.1e-08 61.2 116 37.1
BraA01t00225Z Brassica rapa HOM05D003805 ORTHO05D004300 6.1e-08 61.2 116 37.1
Sp7g34160 Schrenkiella parvula HOM05D003805 ORTHO05D004300 6.1e-08 61.2 119 34.5
BcaB03g12394 Brassica carinata HOM05D003805 ORTHO05D004300 7.9e-08 60.8 119 34.5
BcaC01g00464 Brassica carinata HOM05D003805 ORTHO05D004300 7.9e-08 60.8 119 33.6
C03p80150 Brassica napus HOM05D003805 ORTHO05D004300 7.9e-08 60.8 119 33.6
BolC3t20271H Brassica oleracea HOM05D003805 ORTHO05D004300 7.9e-08 60.8 119 33.6
Lalb_Chr09g0322201 Lupinus albus HOM05D003805 ORTHO05D004300 7.9e-08 60.8 124 33.1
Psat2g157880 Pisum sativum HOM05D003805 ORTHO05D004300 7.9e-08 60.8 62 51.6
Psat4g094680 Pisum sativum HOM05D003805 ORTHO05D004300 7.9e-08 60.8 98 37.8
Aa31LG6G13290 Aethionema arabicum HOM05D003805 ORTHO05D004300 1.0e-07 60.5 118 35.6
ECA238G1778 Erigeron canadensis HOM05D003805 ORTHO05D004300 1.0e-07 60.5 115 36.5
Thhalv10026576m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 1.0e-07 60.5 119 34.5
THA.LOC104826691 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 1.0e-07 60.5 128 32.8
A01p02360 Brassica napus HOM05D003805 ORTHO05D004300 1.4e-07 60.1 119 33.6
C01p02570 Brassica napus HOM05D003805 ORTHO05D004300 1.4e-07 60.1 119 33.6
BolC1t00245H Brassica oleracea HOM05D003805 ORTHO05D004300 1.4e-07 60.1 119 33.6
Sed0008243 Sechium edule HOM05D003805 ORTHO05D004300 1.4e-07 60.1 112 35.7
Ah.03g141100 Amaranthus hybridus HOM05D003805 ORTHO05D004300 1.8e-07 59.7 128 36.7
Lsat_1_v5_gn_2_77320 Lactuca sativa HOM05D003805 ORTHO05D004300 1.8e-07 59.7 119 37.0
VMungo1215G0776 Vigna mungo HOM05D003805 ORTHO05D004300 1.8e-07 59.7 124 37.9
Actinidia19196 Actinidia chinensis HOM05D002962 ORTHO05D003280 2.3e-07 59.3 102 41.2
AT2G18210 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 2.3e-07 59.3 116 37.1
BcaNung00728 Brassica carinata HOM05D003805 ORTHO05D004300 2.3e-07 59.3 119 33.6
BraA01t00224Z Brassica rapa HOM05D003805 ORTHO05D004300 2.3e-07 59.3 119 33.6
Medtr8g077145 Medicago truncatula HOM05D003805 ORTHO05D004300 2.3e-07 59.3 59 49.2
Psat4g094760 Pisum sativum HOM05D003805 ORTHO05D004300 2.3e-07 59.3 98 37.8
BcaB01g00567 Brassica carinata HOM05D003805 ORTHO05D004300 3.0e-07 58.9 124 33.1
Medtr5g020860 Medicago truncatula HOM05D003805 ORTHO05D004300 3.0e-07 58.9 128 32.0
Carub.0007s0382 Capsella rubella HOM05D003805 ORTHO05D004300 3.9e-07 58.5 119 33.6
Lj4g0028115 Lotus japonicus HOM05D003805 ORTHO05D004300 3.9e-07 58.5 59 45.8
Psat4g094720 Pisum sativum HOM05D003805 ORTHO05D004300 3.9e-07 58.5 98 37.8
BcaNung05312 Brassica carinata HOM05D003805 ORTHO05D004300 5.1e-07 58.2 119 32.8
Glyma.16G135600 Glycine max HOM05D003805 ORTHO05D004300 6.7e-07 57.8 117 35.0
Lj4g0007128 Lotus japonicus HOM05D003805 ORTHO05D004300 6.7e-07 57.8 59 45.8
Lj4g0009905 Lotus japonicus HOM05D003805 ORTHO05D004300 6.7e-07 57.8 59 45.8
Manes.01G137700 Manihot esculenta HOM05D003805 ORTHO05D004300 6.7e-07 57.8 50 52.0
Nitab4.5_0007490g0050 Nicotiana tabacum HOM05D003805 ORTHO05D004300 6.7e-07 57.8 112 37.5
Phvul.002G032400 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 6.7e-07 57.8 124 36.3
TPR.G24112 Trifolium pratense HOM05D003805 ORTHO05D004300 1.1e-06 57.0 52 50.0
CARHR281260 Cardamine hirsuta HOM05D003805 ORTHO05D004300 1.5e-06 56.6 118 37.3
Dinv40009 Davidia involucrata HOM05D002962 ORTHO05D004300 1.5e-06 56.6 99 42.4
Thhalv10010834m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 2.0e-06 56.2 127 30.7
HPP92_023423 Vanilla planifolia HOM05D003805 ORTHO05D004300 2.6e-06 55.8 70 44.3
BcaC07g39558 Brassica carinata HOM05D003805 ORTHO05D004300 3.3e-06 55.5 125 32.8
C08p26110 Brassica napus HOM05D003805 ORTHO05D004300 3.3e-06 55.5 125 32.8
BolC8t50229H Brassica oleracea HOM05D003805 ORTHO05D004300 3.3e-06 55.5 125 32.8
Glyma.02G055000 Glycine max HOM05D003805 ORTHO05D004300 3.3e-06 55.5 115 34.8
AL5G31260 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 4.4e-06 55.1 127 33.9
BcaB02g10024 Brassica carinata HOM05D003805 ORTHO05D004300 4.4e-06 55.1 117 36.8
ECA238G4264 Erigeron canadensis HOM05D003805 ORTHO05D004300 5.7e-06 54.7 56 51.8
Nitab4.5_0000178g0350 Nicotiana tabacum HOM05D003805 ORTHO05D004300 5.7e-06 54.7 114 36.0
A07p17480 Brassica napus HOM05D000001 ORTHO05D010258 7.4e-06 54.3 120 35.8
Sp2g30240 Schrenkiella parvula HOM05D003805 ORTHO05D004300 7.4e-06 54.3 80 42.5


User provided reference genes

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