Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 8.3e-108 393.7 192 100.0
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.5e-96 356.3 192 86.5
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 5.6e-96 354.4 193 87.0
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 1.2e-95 353.2 192 86.5
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 1.1e-94 350.1 192 85.4
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.2e-93 346.7 194 85.6
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.5e-93 346.3 192 85.4
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 1.5e-93 346.3 192 85.4
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.5e-93 346.3 193 86.0
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 3.4e-93 345.1 192 84.9
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 4.4e-93 344.7 193 83.9
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 9.9e-93 343.6 193 83.9
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 1.3e-92 343.2 193 84.5
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 2.2e-92 342.4 192 84.4
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 2.2e-92 342.4 193 85.5
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 2.9e-92 342.0 192 84.4
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 2.9e-92 342.0 193 85.0
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 3.8e-92 341.7 193 82.9
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 6.4e-92 340.9 192 83.9
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 8.4e-92 340.5 193 82.9
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 8.4e-92 340.5 193 82.9
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 1.4e-91 339.7 193 84.5
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.4e-91 339.7 193 82.9
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.9e-91 339.3 193 82.9
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 1.9e-91 339.3 192 82.8
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 2.4e-91 339.0 193 82.4
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 2.4e-91 339.0 191 83.2
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 3.2e-91 338.6 191 82.7
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 4.2e-91 338.2 191 82.7
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 4.2e-91 338.2 193 83.9
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 5.4e-91 337.8 191 82.7
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 5.4e-91 337.8 191 83.2
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 7.1e-91 337.4 192 82.3
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 1.2e-90 336.7 191 82.2
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 1.2e-90 336.7 191 82.2
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 1.2e-90 336.7 192 82.8
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 1.2e-90 336.7 191 82.7
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.2e-90 336.7 192 83.9
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 1.6e-90 336.3 193 82.9
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.7e-90 335.5 193 83.4
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 3.5e-90 335.1 193 82.4
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 6.0e-90 334.3 193 81.3
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 6.0e-90 334.3 193 82.4
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 6.0e-90 334.3 193 80.3
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 7.8e-90 334.0 192 83.9
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.0e-89 333.6 193 81.3
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.0e-89 333.6 193 81.3
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.0e-89 333.6 192 81.8
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.0e-89 333.6 192 81.8
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 1.7e-89 332.8 193 81.3
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 1.7e-89 332.8 192 81.8
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 80.8
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 81.9
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 3.9e-89 331.6 193 81.3
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 5.1e-89 331.3 193 81.9
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 80.8
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 80.8
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 80.8
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 80.8
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 81.9
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 78.8
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 3.3e-88 328.6 189 81.5
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 3.3e-88 328.6 193 80.3
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 7.3e-88 327.4 193 80.3
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.6e-87 326.2 193 81.3
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 2.1e-87 325.9 219 74.0
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 2.1e-87 325.9 193 80.8
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.8e-87 325.5 193 79.8
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.6e-87 325.1 192 78.1
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.2e-87 324.3 209 75.1
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 8.1e-87 323.9 192 80.2
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 8.1e-87 323.9 193 81.3
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 1.1e-86 323.6 192 80.2
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.8e-86 322.8 192 79.7
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.8e-86 322.8 193 79.3
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 3.1e-86 322.0 197 79.2
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 1.2e-85 320.1 191 79.6
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.5e-85 319.7 193 79.8
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.5e-85 319.7 193 79.8
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 2.6e-85 318.9 230 68.7
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 5.8e-85 317.8 193 78.2
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 9.9e-85 317.0 182 84.1
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 9.9e-85 317.0 247 66.4
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 4.9e-84 314.7 201 76.1
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.2e-82 310.1 193 77.7
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 3.5e-82 308.5 164 87.2
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 3.5e-82 308.5 201 74.6
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 1.0e-81 307.0 199 76.4
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 2.5e-80 302.4 167 85.0
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.3e-80 302.0 177 79.7
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.6e-79 299.7 179 79.9
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 6.2e-79 297.7 164 82.3
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 6.2e-79 297.7 198 72.7
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 6.9e-78 294.3 177 79.7
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 2.0e-77 292.7 192 74.5
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.0e-73 280.4 193 70.5
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 6.7e-73 277.7 159 81.8
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 4.8e-71 271.6 188 70.7
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 4.5e-69 265.0 159 81.1
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.8e-69 264.6 160 80.6
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.1e-67 260.4 158 79.1
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.3e-65 253.4 134 88.1
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 6.7e-65 251.1 194 67.0
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 2.8e-63 245.7 166 70.5
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.9e-62 241.1 226 58.0
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 9.0e-62 240.7 139 82.0
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 3.8e-60 235.3 164 69.5
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 1.2e-58 230.3 166 64.5
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 2.7e-58 229.2 173 64.2
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 6.7e-57 224.6 173 61.8
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.5e-56 223.4 138 79.0
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 5.7e-56 221.5 192 63.0
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.5e-53 211.8 169 63.9
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 7.7e-53 211.1 178 56.7
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 1.2e-50 203.8 112 82.1
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.0e-48 196.4 142 62.7
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 2.9e-44 182.6 110 76.4
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 5.5e-43 178.3 142 57.0
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 2.4e-38 162.9 144 49.3
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 7.0e-38 161.4 106 67.0
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.3e-30 135.2 174 46.0
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 3.5e-29 132.5 135 54.1
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.5e-27 127.1 137 51.8
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.5e-27 127.1 133 54.9
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 9.8e-24 114.4 219 37.4
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 6.3e-23 111.7 126 48.4
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.1e-22 109.4 133 46.6
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 9.1e-22 107.8 122 49.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.5e-21 105.5 68 73.5
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.8e-17 93.6 59 74.6
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 6.8e-17 91.7 53 83.0
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 9.8e-16 87.8 56 71.4
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 3.8e-12 75.9 50 74.0
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.0e-09 67.8 103 39.8
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 5.8e-08 62.0 42 71.4
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 2.2e-07 60.1 33 72.7


User provided reference genes

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