Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 4.1e-72 274.6 140 100.0
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 9.0e-27 124.0 128 51.6
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 9.0e-27 124.0 129 55.0
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 2.6e-26 122.5 128 50.8
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 4.5e-26 121.7 127 55.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 1.3e-25 120.2 126 55.6
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 1.7e-25 119.8 131 52.7
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.9e-25 119.0 134 50.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 4.9e-25 118.2 131 51.9
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.4e-24 116.7 134 53.0
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.4e-24 116.7 109 58.7
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.9e-24 116.3 131 52.7
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 3.2e-24 115.5 134 52.2
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 9.3e-24 114.0 132 49.2
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.6e-23 113.2 130 53.1
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 2.7e-23 112.5 126 53.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 7.9e-23 110.9 134 48.5
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.3e-22 110.2 133 48.9
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.0e-22 109.0 107 57.0
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 3.9e-22 108.6 134 50.0
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 3.9e-22 108.6 121 52.1
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 5.1e-22 108.2 112 57.1
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 5.1e-22 108.2 129 50.4
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 6.7e-22 107.8 129 51.9
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.1e-21 107.1 128 51.6
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.5e-21 105.9 134 52.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 2.5e-21 105.9 128 51.6
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 2.5e-21 105.9 128 51.6
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.5e-21 105.9 108 53.7
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 4.3e-21 105.1 128 51.6
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 5.6e-21 104.8 128 46.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 5.6e-21 104.8 106 55.7
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 5.6e-21 104.8 90 63.3
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 5.6e-21 104.8 136 44.9
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.3e-20 103.6 130 50.8
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.3e-20 103.6 128 48.4
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.6e-20 103.2 109 55.0
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 3.7e-20 102.1 81 63.0
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.7e-20 102.1 133 42.1
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 3.7e-20 102.1 75 66.7
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 8.1e-20 100.9 129 49.6
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 8.1e-20 100.9 129 49.6
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.1e-19 100.5 103 55.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.8e-19 99.8 88 61.4
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.8e-19 99.8 128 49.2
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 3.1e-19 99.0 128 43.8
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 4.0e-19 98.6 132 40.2
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.0e-19 98.6 106 46.2
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 5.3e-19 98.2 69 71.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 5.3e-19 98.2 128 47.7
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 6.9e-19 97.8 107 54.2
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.9e-19 97.8 107 54.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.5e-18 96.7 104 53.8
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.6e-18 95.9 107 54.2
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 2.6e-18 95.9 105 51.4
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 3.4e-18 95.5 109 51.4
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 3.4e-18 95.5 92 58.7
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 4.5e-18 95.1 117 51.3
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.5e-18 95.1 132 39.4
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 5.8e-18 94.7 63 74.6
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 5.8e-18 94.7 63 74.6
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 5.8e-18 94.7 129 46.5
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.7e-17 93.2 89 61.8
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.7e-17 93.2 89 61.8
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 3.8e-17 92.0 128 44.5
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 6.5e-17 91.3 89 58.4
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 8.4e-17 90.9 132 43.2
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 8.4e-17 90.9 131 48.9
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 8.4e-17 90.9 132 44.7
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.1e-16 90.5 150 43.3
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.4e-16 90.1 129 44.2
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.5e-16 88.2 127 45.7
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 7.1e-16 87.8 152 42.1
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.6e-15 86.7 85 54.1
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 2.7e-15 85.9 132 44.7
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 3.5e-15 85.5 68 61.8
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 6.0e-15 84.7 114 45.6
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.0e-14 84.0 130 41.5
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.3e-14 83.6 75 54.7
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 1.8e-14 83.2 129 41.1
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.3e-14 82.8 63 58.7
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 3.0e-14 82.4 87 54.0
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.9e-14 82.0 62 67.7
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 3.9e-14 82.0 83 51.8
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 3.9e-14 82.0 84 54.8
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 5.1e-14 81.6 132 38.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 1.1e-13 80.5 75 58.7
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.5e-13 80.1 111 45.9
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 7.4e-13 77.8 95 49.5
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.8e-12 75.9 133 42.1
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.7e-12 75.5 132 43.2
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 4.8e-12 75.1 134 39.6
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 6.3e-12 74.7 141 36.9
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.1e-11 73.9 133 39.8
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.4e-11 73.6 114 41.2
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.8e-11 73.2 116 40.5
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.4e-11 72.8 137 40.9
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 2.4e-11 72.8 133 41.4
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 3.1e-11 72.4 126 38.1
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 3.1e-11 72.4 157 36.3
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 6.9e-11 71.2 63 58.7
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 1.2e-10 70.5 88 47.7
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.0e-10 69.7 79 57.0
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.4e-10 68.9 98 40.8
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 5.9e-10 68.2 106 41.5
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.0e-09 67.4 85 45.9
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.7e-09 66.6 116 38.8
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 2.2e-09 66.2 82 47.6
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 2.9e-09 65.9 101 41.6
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 6.5e-09 64.7 50 64.0
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 4.2e-08 62.0 105 42.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 7.2e-08 61.2 105 42.9
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 1.6e-07 60.1 74 47.3
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.6e-07 58.9 106 39.6
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 7.9e-07 57.8 102 40.2
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.0e-06 57.4 136 39.0
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 1.0e-06 57.4 110 35.5
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 1.0e-06 57.4 96 38.5
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 1.8e-06 56.6 66 50.0
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 5.1e-06 55.1 101 39.6


User provided reference genes

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