Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 0.0e+00 1733.0 996 100.0
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-51 209.1 1012 26.6
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.4e-44 186.0 238 47.1
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 5.8e-43 180.6 240 47.9
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 6.4e-42 177.2 236 48.3
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 5.6e-38 164.1 1029 25.2
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 8.9e-36 156.8 184 49.5
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.0e-35 155.6 250 39.6
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.4e-35 154.8 252 41.3
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.2e-34 152.1 1041 24.6
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 6.4e-34 150.6 262 41.2
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.9e-33 149.1 249 40.6
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 3.2e-33 148.3 262 40.8
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 9.2e-33 146.7 246 40.7
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 9.2e-33 146.7 255 40.0
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 2.7e-32 145.2 250 40.0
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 3.0e-31 141.7 237 41.8
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 8.6e-31 140.2 1053 25.3
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 2.5e-30 138.7 246 40.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 9.5e-30 136.7 259 39.0
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.2e-29 136.3 247 40.1
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-29 136.3 239 41.4
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 3.6e-29 134.8 227 42.3
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 4.7e-29 134.4 234 39.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.2e-29 134.0 239 40.2
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 6.2e-29 134.0 239 40.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 3.1e-28 131.7 235 39.6
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 8.9e-28 130.2 248 36.7
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.5e-27 129.4 1051 23.2
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.5e-27 129.4 183 44.8
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 3.4e-27 128.3 220 39.5
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 4.4e-27 127.9 258 37.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.3e-26 126.3 237 40.1
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.3e-26 126.3 263 36.5
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.9e-26 125.2 257 36.2
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 6.4e-26 124.0 220 38.6
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 6.4e-26 124.0 184 42.9
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 8.4e-26 123.6 224 37.9
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 1.1e-25 123.2 279 36.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.1e-25 123.2 250 37.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 1.1e-25 123.2 235 39.1
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.1e-25 123.2 238 37.8
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.4e-25 122.9 236 38.1
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 2.4e-25 122.1 266 37.2
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 4.1e-25 121.3 253 37.2
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 7.1e-25 120.6 212 38.7
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 7.1e-25 120.6 242 37.2
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 9.2e-25 120.2 259 37.1
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 2.1e-24 119.0 224 37.5
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 2.1e-24 119.0 211 39.3
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.7e-24 118.6 220 37.3
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.7e-24 118.6 254 33.5
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 4.6e-24 117.9 241 35.7
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 4.6e-24 117.9 244 35.7
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 6.0e-24 117.5 254 37.4
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 7.8e-24 117.1 175 44.6
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.0e-23 116.7 247 34.8
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.0e-23 116.7 214 38.3
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.0e-23 116.7 242 36.0
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.7e-23 115.9 254 37.0
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 2.3e-23 115.5 238 35.3
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 2.3e-23 115.5 234 37.6
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.0e-23 115.2 255 37.6
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 3.0e-23 115.2 233 38.6
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 3.0e-23 115.2 261 33.3
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 3.9e-23 114.8 270 34.1
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 5.1e-23 114.4 131 48.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 5.1e-23 114.4 129 45.7
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 5.1e-23 114.4 270 34.4
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 5.1e-23 114.4 270 34.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 5.1e-23 114.4 248 34.7
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 6.6e-23 114.0 272 32.4
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 6.6e-23 114.0 225 34.7
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.5e-22 112.8 179 43.0
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.9e-22 112.5 255 36.9
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.5e-22 112.1 244 35.7
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 4.3e-22 111.3 244 35.7
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 5.6e-22 110.9 134 47.8
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 5.6e-22 110.9 1037 22.7
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 9.6e-22 110.2 245 31.8
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 3.6e-21 108.2 242 33.1
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 3.6e-21 108.2 242 33.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 4.7e-21 107.8 237 32.9
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 6.2e-21 107.5 230 33.5
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 8.1e-21 107.1 261 33.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.4e-20 106.3 237 32.9
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.4e-20 106.3 186 39.8
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.8e-20 105.9 275 33.1
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 3.1e-20 105.1 249 32.9
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 6.8e-20 104.0 233 33.5
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.2e-19 103.2 251 35.5
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.5e-19 102.8 123 44.7
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.5e-19 102.8 123 44.7
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 1.5e-19 102.8 123 44.7
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.0e-19 102.4 202 39.1
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 2.0e-19 102.4 241 34.0
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.3e-18 99.8 129 43.4
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 2.2e-18 99.0 251 31.9
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 2.2e-18 99.0 237 30.8
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 2.2e-18 99.0 222 32.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.4e-17 96.3 275 30.9
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.4e-17 96.3 195 32.3
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 9.3e-17 93.6 419 27.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.1e-16 92.4 265 27.2
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 7.8e-16 90.5 95 49.5
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.3e-15 89.7 219 32.0
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 5.1e-15 87.8 1061 23.5
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.5e-14 86.3 236 31.4
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 5.6e-14 84.3 1064 23.6
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 5.6e-14 84.3 256 33.6
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.1e-13 80.5 133 36.8
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.8e-12 79.3 118 39.0
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.2e-11 76.6 183 33.3
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.6e-11 75.5 1064 23.0
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.3e-10 73.2 68 48.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.7e-10 72.8 310 28.4
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.4e-09 69.7 188 30.9
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 7.1e-09 67.4 137 31.4
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 9.3e-09 67.0 132 37.9
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 3.5e-08 65.1 204 32.8


User provided reference genes

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