Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01050 Aquilegia oxysepala HOM05D006072 ORTHO05D007363 7.1e-72 273.9 141 100.0
Aqoxy1G01513 Aquilegia oxysepala HOM05D006189 ORTHO05D007765 5.5e-32 141.4 113 73.5
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 2.6e-26 122.5 142 58.5
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 3.2e-24 115.5 141 54.6
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 6.7e-22 107.8 141 51.1
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 9.7e-21 104.0 140 50.7
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 4.8e-20 101.7 138 47.8
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 9.1e-19 97.4 137 45.3
PGR083G2817 Punica granatum HOM05D006072 ORTHO05D007363 5.9e-18 94.7 83 60.2
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 1.3e-17 93.6 143 44.8
Eucgr.H00590 Eucalyptus grandis HOM05D006072 ORTHO05D007363 1.1e-16 90.5 102 52.0
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 1.4e-16 90.1 149 40.9
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 5.5e-16 88.2 141 42.6
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 5.5e-16 88.2 142 41.5
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 7.2e-16 87.8 144 43.1
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 1.2e-15 87.0 96 52.1
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 1.6e-15 86.7 139 43.2
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 1.6e-15 86.7 141 43.3
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 2.1e-15 86.3 135 44.4
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 4.7e-15 85.1 140 42.9
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 1.8e-14 83.2 105 48.6
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 2.3e-14 82.8 95 49.5
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 2.3e-14 82.8 96 52.1
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 8.8e-14 80.9 134 42.5
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 1.1e-13 80.5 137 42.3
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 1.1e-13 80.5 156 40.4
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 1.5e-13 80.1 105 49.5
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 1.5e-13 80.1 77 58.4
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 2.0e-13 79.7 86 50.0
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 2.0e-13 79.7 134 42.5
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 2.6e-13 79.3 89 53.9
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 3.3e-13 79.0 135 44.4
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 3.3e-13 79.0 135 44.4
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 7.4e-13 77.8 77 57.1
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 9.7e-13 77.4 140 41.4
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 1.7e-12 76.6 128 45.3
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 1.7e-12 76.6 91 51.6
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 2.2e-12 76.3 83 51.8
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.2e-12 76.3 127 41.7
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 2.2e-12 76.3 127 41.7
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 2.8e-12 75.9 136 41.9
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 4.8e-12 75.1 89 46.1
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 6.3e-12 74.7 145 40.7
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 6.3e-12 74.7 135 39.3
ATR0598G193 Amborella trichopoda HOM05D006072 ORTHO05D007363 8.2e-12 74.3 137 40.9
ATR0598G249 Amborella trichopoda HOM05D006072 ORTHO05D007363 1.8e-11 73.2 137 36.5
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 1.8e-11 73.2 138 39.1
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 1.8e-11 73.2 73 54.8
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 5.3e-11 71.6 68 55.9
PGR083G1472 Punica granatum HOM05D006072 ORTHO05D007363 7.0e-11 71.2 77 53.2
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 9.1e-11 70.9 136 41.9
Actinidia12426 Actinidia chinensis HOM05D006072 ORTHO05D007363 1.6e-10 70.1 87 44.8
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.6e-10 70.1 138 42.0
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 2.0e-10 69.7 99 48.5
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 4.5e-10 68.6 101 41.6
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.0e-09 67.4 94 50.0
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 1.3e-09 67.0 147 36.7
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.7e-09 66.6 143 37.1
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 2.9e-09 65.9 91 44.0
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 2.9e-09 65.9 136 39.0
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.8e-09 65.5 129 36.4
ATR0598G294 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.8e-09 65.5 96 41.7
arahy.Tifrunner.gnm1.ann1.4ZS2ZJ Arachis hypogaea HOM05D006072 ORTHO05D007363 1.5e-08 63.5 76 52.6
arahy.Tifrunner.gnm1.ann1.UPZ3Q7 Arachis hypogaea HOM05D006072 ORTHO05D007363 1.5e-08 63.5 76 52.6
arahy.Tifrunner.gnm1.ann1.YR9HNH Arachis hypogaea HOM05D006072 ORTHO05D007363 1.5e-08 63.5 76 52.6
Ca_20317_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 2.5e-08 62.8 140 38.6
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 4.2e-08 62.0 69 50.7
Hma1.2p1_0281F.1_g113250 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 5.5e-08 61.6 76 51.3
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 4.7e-07 58.5 89 42.7
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 4.7e-07 58.5 77 40.3
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.4e-06 57.0 130 37.7
Dinv16779 Davidia involucrata HOM05D006072 ORTHO05D007363 4.0e-06 55.5 59 50.8
Medtr0082s0140 Medicago truncatula HOM05D006072 ORTHO05D007363 6.7e-06 54.7 127 37.0


User provided reference genes

Program Settings