Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00937 Aquilegia oxysepala HOM05D005468 ORTHO05D006789 8.7e-128 460.3 230 100.0
Hma1.2p1_0260F.1_g104510 Hydrangea macrophylla HOM05D005468 ORTHO05D006789 8.7e-112 407.1 228 85.5
TAR625G1030 Trochodendron aralioides HOM05D005468 ORTHO05D006789 1.9e-111 406.0 227 87.2
Nn5g29408 Nelumbo nucifera HOM05D005468 ORTHO05D006789 2.5e-111 405.6 228 86.4
Eucgr.F02400 Eucalyptus grandis HOM05D005468 ORTHO05D006789 5.7e-111 404.4 228 85.5
Rhsim06G0040800 Rhododendron simsii HOM05D005468 ORTHO05D006789 5.7e-111 404.4 228 86.4
Sabra02G0102000 Salix brachista HOM05D005468 ORTHO05D006789 5.7e-111 404.4 228 85.5
Ciclev10002374m.g Citrus clementina HOM05D005468 ORTHO05D006789 7.4e-111 404.1 228 85.5
TWI56G0523 Tripterygium wilfordii HOM05D005468 ORTHO05D006789 7.4e-111 404.1 228 85.1
Potri.002G130100 Populus trichocarpa HOM05D005468 ORTHO05D006789 1.3e-110 403.3 228 85.5
SalBow8G4730 Salvia bowleyana HOM05D005468 ORTHO05D006789 1.3e-110 403.3 228 84.6
Lj1g0015279 Lotus japonicus HOM05D005468 ORTHO05D006789 2.2e-110 402.5 227 85.5
CiPaw.16G051900 Carya illinoinensis HOM05D005468 ORTHO05D006789 2.8e-110 402.1 228 84.6
Duzib093G1518 Durio zibethinus HOM05D005468 ORTHO05D006789 2.8e-110 402.1 228 85.5
PGR031G2816 Punica granatum HOM05D005468 ORTHO05D006789 2.8e-110 402.1 228 85.5
vmacro21583 Vaccinium macrocarpon HOM05D005468 ORTHO05D006789 2.8e-110 402.1 228 85.5
Cc10_g03660 Coffea canephora HOM05D005468 ORTHO05D006789 3.7e-110 401.7 228 85.5
Medtr3g100940 Medicago truncatula HOM05D005468 ORTHO05D006789 4.8e-110 401.4 228 85.1
Thecc.08G017100 Theobroma cacao HOM05D005468 ORTHO05D006789 4.8e-110 401.4 228 85.5
Potri.014G037100 Populus trichocarpa HOM05D005468 ORTHO05D006789 6.3e-110 401.0 228 85.1
arahy.Tifrunner.gnm1.ann1.P2WCGJ Arachis hypogaea HOM05D005468 ORTHO05D006789 8.2e-110 400.6 227 84.6
arahy.Tifrunner.gnm1.ann1.Y0EE8X Arachis hypogaea HOM05D005468 ORTHO05D006789 8.2e-110 400.6 227 84.6
COL.COLO4_26415 Corchorus olitorius HOM05D005468 ORTHO05D006789 8.2e-110 400.6 228 84.2
Migut.C00650 Erythranthe guttata HOM05D005468 ORTHO05D006789 8.2e-110 400.6 228 82.9
MSTRG.22278 Avicennia marina HOM05D005468 ORTHO05D006789 1.1e-109 400.2 228 83.8
FvH4_2g40630 Fragaria vesca HOM05D005468 ORTHO05D006789 1.1e-109 400.2 228 84.6
Duzib116G0868 Durio zibethinus HOM05D005468 ORTHO05D006789 1.4e-109 399.8 227 85.5
Gorai.010G015600 Gossypium raimondii HOM05D005468 ORTHO05D006789 1.8e-109 399.4 228 85.1
Lalb_Chr08g0245731 Lupinus albus HOM05D005468 ORTHO05D006789 1.8e-109 399.4 227 85.0
Migut.N02685 Erythranthe guttata HOM05D005468 ORTHO05D006789 2.4e-109 399.1 228 82.9
FAN20G0953 Fragaria x ananassa HOM05D005468 ORTHO05D006789 2.4e-109 399.1 228 84.2
Manes.18G025300 Manihot esculenta HOM05D005468 ORTHO05D006789 2.4e-109 399.1 228 84.6
RcHm_v2.0_Chr6g0300041 Rosa chinensis HOM05D005468 ORTHO05D006789 2.4e-109 399.1 228 84.2
Thhalv10011754m.g Eutrema salsugineum HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 83.3
FAN27G0003 Fragaria x ananassa HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 84.6
Glyma.04G035800 Glycine max HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 85.0
Gohir.D05G201600 Gossypium hirsutum HOM05D005468 ORTHO05D006789 3.1e-109 398.7 225 85.3
Gorai.009G207300 Gossypium raimondii HOM05D005468 ORTHO05D006789 3.1e-109 398.7 225 85.3
Lalb_Chr23g0266811 Lupinus albus HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 85.0
THA.LOC104813200 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 3.1e-109 398.7 228 84.2
VMungo1309G2021 Vigna mungo HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 85.0
Psat5g045200 Pisum sativum HOM05D005468 ORTHO05D006789 5.3e-109 397.9 227 85.0
CiPaw.15G066600 Carya illinoinensis HOM05D005468 ORTHO05D006789 6.9e-109 397.5 228 84.2
Prupe.1G387900 Prunus persica HOM05D005468 ORTHO05D006789 6.9e-109 397.5 228 83.8
GSVIVG01009588001 Vitis vinifera HOM05D005468 ORTHO05D006789 6.9e-109 397.5 228 84.6
Cpa.g.sc64.18 Carica papaya HOM05D005468 ORTHO05D006789 9.0e-109 397.1 228 83.8
FAN15G3574 Fragaria x ananassa HOM05D005468 ORTHO05D006789 9.0e-109 397.1 228 83.3
Sp1g34660 Schrenkiella parvula HOM05D005468 ORTHO05D006789 9.0e-109 397.1 227 82.8
TAR381G1584 Trochodendron aralioides HOM05D005468 ORTHO05D006789 9.0e-109 397.1 227 85.0
Aa31sc119G90 Aethionema arabicum HOM05D005468 ORTHO05D006789 1.2e-108 396.7 227 81.9
Glyma.06G035800 Glycine max HOM05D005468 ORTHO05D006789 1.2e-108 396.7 227 84.6
Gohir.A05G198900 Gossypium hirsutum HOM05D005468 ORTHO05D006789 1.2e-108 396.7 225 84.9
QL02p006494 Quercus lobata HOM05D005468 ORTHO05D006789 1.2e-108 396.7 228 83.3
AL1G54040 Arabidopsis lyrata HOM05D005468 ORTHO05D006789 1.5e-108 396.4 227 81.9
BcaB07g33823 Brassica carinata HOM05D005468 ORTHO05D006789 1.5e-108 396.4 227 82.4
BcaC08g42963 Brassica carinata HOM05D005468 ORTHO05D006789 1.5e-108 396.4 227 82.4
C06p02040 Brassica napus HOM05D005468 ORTHO05D006789 1.5e-108 396.4 227 82.4
BraA10t42894Z Brassica rapa HOM05D005468 ORTHO05D006789 1.5e-108 396.4 227 82.4
Actinidia38034 Actinidia chinensis HOM05D005468 ORTHO05D006789 2.0e-108 396.0 228 83.8
Cfa018481 Carpinus fangiana HOM05D005468 ORTHO05D006789 2.0e-108 396.0 228 84.2
CAN.G1002.2 Capsicum annuum HOM05D005468 ORTHO05D006789 3.4e-108 395.2 228 82.5
Manes.05G168700 Manihot esculenta HOM05D005468 ORTHO05D006789 3.4e-108 395.2 228 83.3
Phvul.009G061800 Phaseolus vulgaris HOM05D005468 ORTHO05D006789 3.4e-108 395.2 227 84.6
Ca_15981_v3 Cicer arietinum L. HOM05D005468 ORTHO05D006789 5.9e-108 394.4 227 84.1
SGA_v2.0_scaffold28G11772 Striga asiatica HOM05D005468 ORTHO05D006789 7.7e-108 394.0 228 82.5
TPR.G26072 Trifolium pratense HOM05D005468 ORTHO05D006789 7.7e-108 394.0 228 84.6
AT1G47640 Arabidopsis thaliana HOM05D005468 ORTHO05D006789 1.0e-107 393.7 227 81.9
THA.LOC104803401 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 1.0e-107 393.7 228 83.3
Actinidia29851 Actinidia chinensis HOM05D005468 ORTHO05D006789 1.7e-107 392.9 228 82.5
MSTRG.24315 Avicennia marina HOM05D005468 ORTHO05D006789 2.2e-107 392.5 228 81.6
Gohir.A06G015000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 2.2e-107 392.5 227 83.7
CANSAT56G1446 Cannabis sativa HOM05D005468 ORTHO05D006789 5.0e-107 391.3 227 81.9
MBI16_g31482_MAGBIO Magnolia biondii HOM05D005468 ORTHO05D006789 5.0e-107 391.3 219 87.2
Os03g0766000 Oryza sativa ssp. japonica HOM05D005468 ORTHO05D006789 6.5e-107 391.0 225 83.1
BraA08t32559Z Brassica rapa HOM05D005468 ORTHO05D006789 8.5e-107 390.6 227 79.7
Sc15g0006600 Simmondsia chinensis HOM05D005468 ORTHO05D006789 8.5e-107 390.6 227 81.9
BcaC07g37205 Brassica carinata HOM05D005468 ORTHO05D006789 1.1e-106 390.2 227 80.2
Carub.0001s3642 Capsella rubella HOM05D005468 ORTHO05D006789 1.1e-106 390.2 227 81.1
Lsat_1_v5_gn_1_19180 Lactuca sativa HOM05D005468 ORTHO05D006789 1.4e-106 389.8 228 83.3
BolC6t35332H Brassica oleracea HOM05D005468 ORTHO05D006789 3.2e-106 388.7 236 79.2
EL10Ac1g01754 Beta vulgaris HOM05D005468 ORTHO05D006789 4.2e-106 388.3 227 80.2
MD15G1034100 Malus domestica HOM05D005468 ORTHO05D006789 7.2e-106 387.5 228 82.0
Sopen12g030860 Solanum pennellii HOM05D005468 ORTHO05D006789 9.4e-106 387.1 230 81.3
PGSC0003DMG400015450 Solanum tuberosum HOM05D005468 ORTHO05D006789 1.2e-105 386.7 230 81.3
Zm00001eb058600 Zea mays HOM05D005468 ORTHO05D006789 1.2e-105 386.7 225 82.2
A08p05550 Brassica napus HOM05D005468 ORTHO05D006789 1.6e-105 386.3 227 79.3
BolC8t47397H Brassica oleracea HOM05D005468 ORTHO05D006789 2.1e-105 386.0 227 79.3
HanXRQChr02g0046441 Helianthus annuus HOM05D005468 ORTHO05D006789 2.7e-105 385.6 228 81.6
C08p06100 Brassica napus HOM05D005468 ORTHO05D006789 2.3e-104 382.5 227 78.9
A10p06260 Brassica napus HOM05D005468 ORTHO05D006789 3.9e-104 381.7 254 73.6
PSO210G2601 Papaver somniferum HOM05D005468 ORTHO05D006789 3.3e-103 378.6 227 81.1
CDE04G3466 Ceratophyllum demersum HOM05D005468 ORTHO05D006789 5.7e-103 377.9 225 80.4
PSO170G5983 Papaver somniferum HOM05D005468 ORTHO05D006789 9.7e-103 377.1 227 80.6
Zm00001eb214040 Zea mays HOM05D005468 ORTHO05D006789 2.2e-102 375.9 225 80.0
Dinv36016 Davidia involucrata HOM05D005468 ORTHO05D006789 3.7e-102 375.2 228 81.6
Gohir.D06G013000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 3.7e-102 375.2 228 80.7
Mapoly0136s0007 Marchantia polymorpha HOM05D005468 ORTHO05D006789 1.7e-99 366.3 227 76.7
MD08G1039400 Malus domestica HOM05D005468 ORTHO05D006789 2.9e-99 365.5 228 77.6
SEGI_18559 Sequoiadendron giganteum HOM05D005468 ORTHO05D006789 3.2e-98 362.1 210 81.4
Pp3c3_13070 Physcomitrium patens HOM05D005468 ORTHO05D006789 5.5e-98 361.3 225 75.1
ECA247G3714 Erigeron canadensis HOM05D005468 ORTHO05D006789 7.2e-98 360.9 201 86.6
HPP92_019640 Vanilla planifolia HOM05D005468 ORTHO05D006789 1.4e-96 356.7 228 74.6
SMO119G0125 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 8.8e-96 354.0 225 74.2
SMO163G0011 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 8.8e-96 354.0 225 74.2
Sabra14G0026700 Salix brachista HOM05D005468 ORTHO05D006789 1.1e-95 353.6 203 85.2
Nn6g32145 Nelumbo nucifera HOM05D005468 ORTHO05D006789 5.7e-95 351.3 228 77.2
CSS0002701 Camellia sinensis var. sinensis HOM05D005468 ORTHO05D006789 9.7e-95 350.5 190 88.9
unitig_26.g10028 Utricularia gibba HOM05D005468 ORTHO05D006789 9.7e-95 350.5 200 83.0
Haze_17591 Corylus avellana HOM05D005468 ORTHO05D006789 2.2e-94 349.4 191 87.4
ATR0733G175 Amborella trichopoda HOM05D005468 ORTHO05D006789 4.8e-94 348.2 195 85.6
Dinv39358 Davidia involucrata HOM05D005468 ORTHO05D006789 1.1e-93 347.1 190 86.3
Nitab4.5_0000453g0110 Nicotiana tabacum HOM05D005468 ORTHO05D006789 1.1e-93 347.1 191 85.9
Hund26608 Selenicereus undatus HOM05D005468 ORTHO05D006789 3.1e-93 345.5 202 83.2
Peaxi162Scf00064g00217 Petunia axillaris HOM05D005468 ORTHO05D006789 7.0e-93 344.4 187 87.7
CsaV3_3G044590 Cucumis sativus L. HOM05D005468 ORTHO05D006789 1.0e-91 340.5 201 83.1
Nitab4.5_0000790g0020 Nicotiana tabacum HOM05D005468 ORTHO05D006789 1.7e-91 339.7 254 68.9
BcaB04g17508 Brassica carinata HOM05D005468 ORTHO05D006789 8.5e-91 337.4 227 72.2
Atru.BG.240.p Acer truncatum HOM05D005468 ORTHO05D006789 2.7e-89 332.4 185 86.5
CBR_g99 Chara braunii HOM05D005468 ORTHO05D006789 2.6e-87 325.9 225 68.0
Ah.03g134890 Amaranthus hybridus HOM05D005468 ORTHO05D006789 5.3e-85 318.2 194 77.3
Sed0015581 Sechium edule HOM05D005468 ORTHO05D006789 2.6e-84 315.8 232 70.3
Oeu028451.1 Olea europaea HOM05D005468 ORTHO05D006789 1.3e-83 313.5 228 69.7
Lj1C905G11 Lonicera japonica HOM05D001696 ORTHO05D001746 1.1e-77 293.9 164 86.0
Sed0011570 Sechium edule HOM05D005468 ORTHO05D006789 2.0e-76 289.7 225 65.3
Atru.chr13.591 Acer truncatum HOM05D005468 ORTHO05D006789 1.9e-74 283.1 161 85.1
CARHR037270 Cardamine hirsuta HOM05D005468 ORTHO05D006789 9.4e-74 280.8 160 81.9
AUR62033873 Chenopodium quinoa HOM05D005468 ORTHO05D006789 4.0e-72 275.4 355 45.4
CARHR054190 Cardamine hirsuta HOM05D005468 ORTHO05D006789 2.1e-65 253.1 160 72.5
AagrBONN_evm.TU.Sc2ySwM_362.508 Anthoceros agrestis HOM05D005468 ORTHO05D006789 7.3e-58 228.0 190 58.9
CARHR034590 Cardamine hirsuta HOM05D005468 ORTHO05D006789 1.9e-53 213.4 131 74.8
Migut.O00871 Erythranthe guttata HOM05D005468 ORTHO05D006789 6.6e-51 204.9 121 80.2
CARHR259240 Cardamine hirsuta HOM05D005468 ORTHO05D006789 4.7e-33 145.6 140 54.3
CARHR037280 Cardamine hirsuta HOM05D005468 ORTHO05D006789 7.3e-26 121.7 69 81.2
arahy.Tifrunner.gnm1.ann1.N94XAP Arachis hypogaea HOM05D005468 ORTHO05D006789 1.4e-21 107.5 62 74.2
CAN.G371.92 Capsicum annuum HOM05D005468 ORTHO05D006789 8.1e-17 91.7 149 39.6
Actinidia01618 Actinidia chinensis HOM05D000509 ORTHO05D000466 9.0e-16 88.2 124 46.0
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-14 84.3 39 92.3
arahy.Tifrunner.gnm1.ann1.APL3GL Arachis hypogaea HOM05D005468 ORTHO05D006789 1.9e-13 80.5 41 82.9
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 2.4e-13 80.1 52 69.2
arahy.Tifrunner.gnm1.ann1.R2S7J0 Arachis hypogaea HOM05D005468 ORTHO05D004485 2.3e-11 73.6 79 48.1
Aa31LG9G12690 Aethionema arabicum HOM05D005468 ORTHO05D006789 9.6e-10 68.2 82 50.0
MD11G1104700 Malus domestica HOM05D005468 ORTHO05D006789 3.1e-08 63.2 49 61.2
ClCG05G019450 Citrullus lanatus HOM05D005468 ORTHO05D006789 1.0e-06 58.2 26 92.3


User provided reference genes

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