Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 3.4e-116 421.8 229 100.0
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.2e-55 220.7 229 53.3
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 5.7e-55 218.4 230 50.0
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 5.7e-55 218.4 229 53.7
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 4.1e-53 212.2 180 62.2
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.1e-53 212.2 176 60.2
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 7.0e-53 211.5 229 51.5
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.2e-52 210.7 185 58.9
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.2e-52 210.7 229 50.2
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.6e-52 210.3 230 48.7
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 7.7e-52 208.0 174 61.5
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 5.0e-51 205.3 179 58.7
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.1e-50 204.1 176 56.8
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 1.9e-50 203.4 178 59.6
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.9e-50 203.4 176 59.7
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 2.5e-50 203.0 176 58.0
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.5e-50 203.0 181 57.5
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 2.5e-50 203.0 228 49.1
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 3.3e-50 202.6 228 50.4
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.3e-50 202.6 180 60.0
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.3e-50 202.6 229 48.9
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 5.5e-50 201.8 178 60.7
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 5.5e-50 201.8 178 59.0
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 5.5e-50 201.8 182 58.2
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 7.2e-50 201.4 176 58.0
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.2e-49 200.7 176 57.4
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.2e-49 200.7 183 57.9
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 1.6e-49 200.3 188 58.0
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 2.1e-49 199.9 180 57.8
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.8e-49 199.5 176 59.1
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.8e-48 196.8 175 56.0
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 3.0e-48 196.1 181 55.2
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 4.0e-48 195.7 181 54.7
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 4.0e-48 195.7 180 56.1
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 6.8e-48 194.9 177 54.8
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.2e-47 194.1 181 54.7
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.2e-47 194.1 181 53.0
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.0e-47 193.4 174 58.0
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.0e-47 193.4 167 59.9
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 2.0e-47 193.4 230 48.3
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.0e-47 193.4 180 57.8
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.6e-47 193.0 180 56.7
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.6e-47 193.0 184 55.4
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 3.4e-47 192.6 227 50.2
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 3.4e-47 192.6 171 58.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 5.7e-47 191.8 198 52.0
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 7.5e-47 191.4 185 55.1
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 7.5e-47 191.4 174 55.7
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 7.5e-47 191.4 181 52.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 9.8e-47 191.0 177 55.4
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 9.8e-47 191.0 167 58.7
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.3e-46 190.7 183 55.2
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.7e-46 190.3 177 54.2
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.7e-46 190.3 174 58.0
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.2e-46 189.9 178 55.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 4.9e-46 188.7 173 54.9
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.9e-46 188.7 175 56.0
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 6.3e-46 188.3 177 54.2
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 8.3e-46 188.0 229 48.9
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.4e-45 187.2 229 46.3
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.4e-45 187.2 167 56.3
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 3.2e-45 186.0 178 53.9
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 3.2e-45 186.0 182 53.8
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 4.1e-45 185.7 229 47.2
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 5.4e-45 185.3 169 56.8
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 5.4e-45 185.3 161 57.8
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 7.0e-45 184.9 176 54.0
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 9.2e-45 184.5 218 48.2
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.2e-44 184.1 169 58.6
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.2e-44 184.1 166 53.6
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.2e-44 184.1 179 53.1
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.2e-44 184.1 179 53.6
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.2e-44 184.1 181 55.2
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.0e-44 183.3 179 53.6
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.0e-44 183.3 179 52.5
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 2.7e-44 183.0 176 55.7
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 2.7e-44 183.0 161 57.1
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 4.5e-44 182.2 168 57.1
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 7.8e-44 181.4 176 53.4
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.3e-43 180.6 182 54.9
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.7e-43 180.3 176 55.1
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 2.3e-43 179.9 181 53.0
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 2.3e-43 179.9 181 53.0
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 2.3e-43 179.9 181 53.0
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.9e-43 179.1 156 58.3
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 3.9e-43 179.1 178 53.4
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 6.6e-43 178.3 182 54.4
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 6.6e-43 178.3 182 54.4
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 6.6e-43 178.3 178 52.8
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 6.6e-43 178.3 181 51.9
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.5e-42 177.2 182 51.6
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 3.3e-42 176.0 178 52.8
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 3.3e-42 176.0 210 48.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 5.6e-42 175.3 177 52.0
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 5.6e-42 175.3 176 52.8
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 7.3e-42 174.9 176 52.3
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 1.2e-41 174.1 170 51.8
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 2.1e-41 173.3 181 49.7
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 4.7e-41 172.2 193 49.2
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.2e-39 167.5 171 52.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 2.0e-39 166.8 166 53.6
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 3.4e-39 166.0 227 46.7
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 5.0e-35 152.1 198 40.9
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 6.6e-35 151.8 176 43.8
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.5e-34 150.6 176 44.3
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 3.3e-34 149.4 170 47.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.1e-32 144.4 192 41.7
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.1e-29 134.4 142 47.2
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 5.4e-29 132.1 210 38.6
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.7e-20 103.2 185 32.4
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 3.5e-20 102.8 87 57.5
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 8.6e-19 98.2 184 33.7
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.3e-18 96.3 195 32.3
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 2.8e-17 93.2 208 32.2
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.4e-16 90.9 66 66.7
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 3.1e-16 89.7 96 52.1
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 5.2e-16 89.0 130 35.4
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 8.7e-11 71.6 102 43.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 2.8e-09 66.6 106 40.6
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 2.9e-06 56.6 107 34.6


User provided reference genes

Program Settings