Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 0.0e+00 1361.3 671 100.0
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 2.3e-192 676.4 719 53.0
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 4.3e-159 565.8 683 47.6
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 5.6e-159 565.5 697 46.5
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 3.6e-150 536.2 688 45.8
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 6.2e-150 535.4 693 45.2
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.9e-148 528.1 682 45.6
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.1e-146 524.6 707 44.0
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.7e-144 517.3 686 44.8
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 5.1e-144 515.8 701 44.1
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 1.9e-143 513.8 570 49.5
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 7.3e-143 511.9 703 44.5
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 2.8e-142 510.0 687 44.5
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.0e-141 506.1 666 45.3
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.3e-141 505.8 668 45.5
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-140 503.8 716 43.3
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 1.4e-138 497.7 674 44.5
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 5.1e-136 489.2 606 45.4
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.9e-135 487.3 684 44.2
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 9.6e-135 485.0 683 43.0
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 1.6e-134 484.2 705 42.4
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 3.7e-134 483.0 689 43.3
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 6.2e-134 482.3 676 44.2
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 1.5e-132 477.6 604 43.9
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 2.0e-132 477.2 693 42.9
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.5e-130 470.3 695 42.3
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.2e-130 469.9 672 43.8
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 1.2e-129 468.0 672 43.5
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 1.0e-128 464.9 669 43.3
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 8.7e-128 461.8 675 41.3
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 6.2e-126 455.7 685 42.8
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 8.2e-126 455.3 683 41.6
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 1.8e-125 454.1 686 40.8
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.8e-125 454.1 678 41.2
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 1.3e-123 448.0 679 39.5
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 1.7e-123 447.6 682 41.8
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 2.9e-123 446.8 673 40.1
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.9e-122 444.1 678 43.1
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 4.2e-122 443.0 676 39.9
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 9.3e-122 441.8 681 41.7
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.6e-121 441.0 690 39.1
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.6e-121 439.5 684 39.5
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.3e-120 438.0 669 39.6
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 3.0e-120 436.8 679 39.6
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 3.9e-120 436.4 678 39.2
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.4e-117 427.2 689 39.2
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 3.1e-117 426.8 682 38.4
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 1.5e-116 424.5 666 39.8
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.3e-115 421.4 693 39.0
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.4e-112 411.4 675 37.6
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 3.7e-110 403.3 679 37.6
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 4.8e-110 402.9 712 37.9
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 4.8e-110 402.9 554 42.2
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.1e-109 401.7 669 37.2
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 3.4e-108 396.7 651 37.6
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 5.9e-108 396.0 673 39.7
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 7.7e-108 395.6 532 44.9
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.2e-106 390.2 561 42.2
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 2.7e-105 387.1 679 38.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 1.0e-104 385.2 683 38.4
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 3.0e-104 383.6 676 36.8
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 3.0e-104 383.6 588 39.5
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 2.0e-103 380.9 708 37.3
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 4.4e-103 379.8 688 37.9
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 1.3e-102 378.3 671 37.0
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.1e-101 375.2 688 37.4
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.8e-101 374.4 685 37.5
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 3.5e-100 370.2 693 36.8
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 8.5e-99 365.5 710 35.6
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 3.2e-98 363.6 654 37.5
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 2.3e-96 357.5 668 35.8
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 3.0e-96 357.1 690 36.1
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.5e-95 354.8 683 36.7
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 2.0e-95 354.4 653 37.1
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 3.3e-95 353.6 591 39.3
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 4.4e-95 353.2 646 36.5
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 1.8e-93 347.8 640 36.2
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 4.1e-93 346.7 579 37.7
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.6e-92 344.7 657 35.5
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 2.6e-92 344.0 674 35.3
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 1.6e-89 334.7 695 35.1
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 6.1e-89 332.8 695 35.0
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 6.8e-88 329.3 691 35.3
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 5.7e-87 326.2 569 36.2
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 7.5e-87 325.9 618 36.9
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 1.7e-86 324.7 739 33.6
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 1.8e-85 321.2 694 32.7
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 2.0e-84 317.8 668 33.7
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 5.0e-83 313.2 508 38.6
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 6.1e-81 306.2 432 43.8
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 1.6e-76 291.6 364 44.5
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 3.5e-76 290.4 558 36.0
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.1e-74 285.4 436 41.5
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 8.0e-73 279.3 684 32.3
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 2.0e-71 274.6 702 31.2
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 3.2e-69 267.3 395 39.2
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 1.6e-68 265.0 404 39.6
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 6.2e-57 226.5 320 41.6
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 1.3e-54 218.8 378 38.6
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.6e-52 211.8 374 37.4
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.8e-48 198.4 322 39.1
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.4e-39 167.5 193 52.8
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 2.8e-33 147.9 162 50.0
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 3.9e-27 127.5 137 53.3
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 9.3e-21 106.3 137 46.0
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 7.9e-20 103.2 561 25.7
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.3e-19 101.7 364 26.9
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 8.7e-19 99.8 221 32.1
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 3.1e-16 91.3 685 22.8
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 9.0e-16 89.7 97 55.7
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 1.9e-13 82.0 328 26.2
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.0e-11 76.3 79 55.7
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.0e-11 76.3 79 55.7
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 1.9e-10 72.0 308 27.9
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.3e-09 69.3 46 65.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 3.1e-08 64.7 78 44.9
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 7.6e-07 60.1 133 27.1


User provided reference genes

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