Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 5.7e-109 397.5 191 100.0
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 5.4e-75 284.6 190 70.0
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 2.2e-60 236.1 189 59.3
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 8.4e-60 234.2 195 59.5
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 3.0e-57 225.7 191 59.7
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.3e-52 210.3 185 55.7
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 2.1e-50 203.0 188 54.3
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.8e-49 199.9 192 54.2
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 2.8e-47 192.6 197 48.2
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 7.6e-45 184.5 191 48.7
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.0e-44 184.1 185 48.1
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 5.0e-44 181.8 195 47.2
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 6.5e-44 181.4 196 49.0
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 1.9e-43 179.9 185 47.6
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 1.9e-43 179.9 185 47.6
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 2.5e-43 179.5 195 45.6
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 2.5e-43 179.5 195 46.2
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 3.2e-43 179.1 185 47.0
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 3.2e-43 179.1 185 47.0
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 4.2e-43 178.7 195 45.6
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 5.5e-43 178.3 181 47.5
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 7.2e-43 177.9 205 45.9
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 7.2e-43 177.9 195 46.2
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 9.3e-43 177.6 194 48.5
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.3e-41 173.7 203 46.8
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 1.1e-40 170.6 195 45.6
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 1.1e-40 170.6 170 47.6
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 2.5e-40 169.5 193 46.1
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 3.3e-40 169.1 190 48.4
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 7.4e-40 167.9 191 47.1
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 9.7e-40 167.5 193 44.0
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.3e-39 167.2 203 45.3
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 1.3e-39 167.2 194 46.9
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.2e-39 166.4 203 44.3
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 2.8e-39 166.0 197 43.7
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 2.8e-39 166.0 192 47.4
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 4.8e-39 165.2 205 43.4
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 4.8e-39 165.2 161 50.3
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 8.2e-39 164.5 194 45.4
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 3.1e-38 162.5 183 43.7
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 3.1e-38 162.5 182 46.2
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 5.3e-38 161.8 191 45.5
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 7.7e-37 157.9 200 45.5
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 7.7e-37 157.9 170 45.9
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 2.2e-36 156.4 191 45.5
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 2.9e-36 156.0 191 45.5
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 3.8e-36 155.6 193 45.6
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.8e-36 155.6 191 46.1
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 6.5e-36 154.8 174 46.6
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 8.5e-36 154.5 191 44.0
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.4e-35 153.7 191 45.5
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 2.5e-35 152.9 191 43.5
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 2.5e-35 152.9 184 44.6
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 4.2e-35 152.1 191 45.5
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 2.7e-34 149.4 191 43.5
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 1.4e-33 147.1 195 43.1
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.3e-33 146.4 184 44.0
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 2.3e-33 146.4 180 43.9
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 6.7e-33 144.8 184 42.9
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 2.8e-31 139.4 198 39.9
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 3.7e-31 139.0 195 38.5
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 4.8e-31 138.7 162 44.4
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 6.3e-31 138.3 197 42.6
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 1.1e-30 137.5 185 41.6
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 3.1e-30 136.0 184 39.7
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 3.1e-30 136.0 192 40.1
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 4.1e-30 135.6 190 39.5
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 4.1e-30 135.6 196 38.8
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 1.2e-29 134.0 175 40.6
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 1.2e-29 134.0 197 39.1
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 5.9e-29 131.7 195 36.9
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 5.9e-29 131.7 183 39.9
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 7.7e-29 131.3 230 38.7
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 7.7e-29 131.3 230 38.7
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 7.7e-29 131.3 181 39.8
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 1.7e-28 130.2 154 44.2
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 5.0e-28 128.6 195 39.0
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 8.5e-28 127.9 196 37.8
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 8.5e-28 127.9 180 39.4
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 8.5e-28 127.9 180 39.4
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.1e-27 127.5 192 35.9
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 2.5e-27 126.3 227 36.6
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 3.2e-27 125.9 182 37.9
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 5.5e-27 125.2 180 38.9
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.2e-26 124.0 179 39.1
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 1.2e-26 124.0 178 39.3
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.6e-26 123.6 185 35.1
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 1.6e-26 123.6 105 56.2
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 2.1e-26 123.2 169 40.8
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 2.1e-26 123.2 187 33.7
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 2.7e-26 122.9 180 37.8
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 2.7e-26 122.9 189 34.9
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 3.6e-26 122.5 187 33.7
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 4.7e-26 122.1 185 35.1
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 4.7e-26 122.1 181 37.6
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 6.1e-26 121.7 187 34.2
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.0e-25 120.9 195 38.5
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.0e-25 120.9 195 38.5
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.0e-25 120.9 181 40.9
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.0e-25 120.9 181 39.2
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.0e-25 120.9 181 40.9
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 1.8e-25 120.2 187 33.7
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 2.3e-25 119.8 179 34.6
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 5.2e-25 118.6 184 40.2
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 6.7e-25 118.2 178 39.3
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 6.7e-25 118.2 187 33.7
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 3.3e-24 115.9 197 33.5
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 3.3e-24 115.9 197 34.0
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 9.7e-24 114.4 174 35.6
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 1.3e-23 114.0 183 33.9
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 1.3e-23 114.0 198 30.8
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 3.7e-23 112.5 192 31.8
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 4.8e-23 112.1 176 38.1
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 6.3e-23 111.7 175 38.3
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 6.3e-23 111.7 175 38.3
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 8.2e-23 111.3 194 35.1
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 1.8e-22 110.2 192 32.3
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 2.4e-22 109.8 189 36.0
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 4.1e-22 109.0 189 34.9
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 4.1e-22 109.0 187 32.1
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 5.3e-22 108.6 186 32.3
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 7.0e-22 108.2 187 33.7
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 7.0e-22 108.2 189 31.7
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 9.1e-22 107.8 179 36.3
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-21 107.5 156 37.2
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 1.2e-21 107.5 190 30.5
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.6e-21 106.3 173 37.6
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 2.6e-21 106.3 189 35.4
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 3.5e-21 105.9 193 34.7
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 3.5e-21 105.9 155 37.4
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 4.5e-21 105.5 180 35.6
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 4.5e-21 105.5 193 35.2
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 4.5e-21 105.5 180 35.6
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 4.5e-21 105.5 177 34.5
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 4.5e-21 105.5 192 35.9
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 5.9e-21 105.1 197 31.5
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 5.9e-21 105.1 195 34.4
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 7.7e-21 104.8 195 34.4
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 7.7e-21 104.8 179 35.8
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 7.7e-21 104.8 198 31.8
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 1.0e-20 104.4 180 35.6
SEGI_10997 Sequoiadendron giganteum HOM05D002590 ORTHO05D002763 1.0e-20 104.4 145 37.2
SEGI_25558 Sequoiadendron giganteum HOM05D002590 ORTHO05D002763 1.0e-20 104.4 145 37.2
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 1.3e-20 104.0 195 29.7
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 1.7e-20 103.6 183 33.9
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 1.7e-20 103.6 187 35.3
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 2.2e-20 103.2 180 35.0
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 2.2e-20 103.2 186 32.3
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 2.9e-20 102.8 182 33.0
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 5.0e-20 102.1 182 34.1
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 5.0e-20 102.1 177 33.3
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 6.5e-20 101.7 177 35.0
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 8.5e-20 101.3 183 32.8
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 1.9e-19 100.1 180 34.4
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 1.9e-19 100.1 176 34.1
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.2e-19 99.4 112 47.3
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 5.5e-19 98.6 193 33.2
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 7.2e-19 98.2 208 34.1
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.7e-18 96.3 153 34.6
SalBow5G5729 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.7e-18 96.3 143 39.2
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 4.7e-18 95.5 187 31.6
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 4.7e-18 95.5 187 31.6
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 4.7e-18 95.5 187 31.6
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-17 94.0 173 32.9
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 2.3e-17 93.2 125 43.2
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 3.0e-17 92.8 202 35.1
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 6.7e-17 91.7 194 36.6
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 9.7e-16 87.8 175 33.1
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 1.7e-15 87.0 81 49.4
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 2.2e-15 86.7 175 30.3
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 2.8e-15 86.3 146 34.2
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 5.3e-14 82.0 185 28.1
SEGI_16345 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 2.0e-13 80.1 147 35.4
SalBow5G3492 Salvia bowleyana HOM05D003474 ORTHO05D003971 4.5e-13 79.0 123 39.0
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 4.5e-13 79.0 125 34.4
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 5.9e-13 78.6 129 32.6
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 1.3e-12 77.4 193 30.1
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 6.5e-12 75.1 128 33.6
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 8.5e-12 74.7 120 33.3
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 1.9e-11 73.6 97 40.2
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 1.9e-11 73.6 126 33.3
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 1.2e-10 70.9 120 31.7
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 3.6e-10 69.3 115 35.7
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.3e-09 66.6 123 35.0
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 3.0e-09 66.2 87 40.2
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 2.6e-08 63.2 73 43.8
Zm00001eb109720 Zea mays HOM05D003474 ORTHO05D003971 9.1e-06 54.7 112 31.2


User provided reference genes

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